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ONTOLOGY REPORT - ANNOTATIONS


Term:stereocilium base
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Accession:GO:0120044 term browser browse the term
Definition:The tapered base of the stereocilium adjacent to where it joins the hair cell body. This region contains a rootlet comprised of bundled actin filaments which spans the joint and stabilizes the stereocilium.
Synonyms:exact_synonym: stereocilium taper


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stereocilium base term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRXCR2 glutaredoxin and cysteine rich domain containing 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:147,215,061...147,231,792
Ensembl chr 2:147,216,279...147,232,250
JBrowse link
G MYO7A myosin VIIA ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 9:11,251,187...11,337,618
Ensembl chr 9:11,249,075...11,666,296
JBrowse link
G PJVK pejvakin IEA Ensembl GO_REF:0000107 NCBI chr15:84,157,864...84,165,763
Ensembl chr15:84,157,419...84,165,438
JBrowse link
G TPRN taperin IEA Ensembl GO_REF:0000107
G TRIOBP TRIO and F-actin binding protein IEA Ensembl GO_REF:0000107 NCBI chr 5:10,066,080...10,132,668
Ensembl chr 5:10,066,086...10,126,491
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16940
    cellular anatomical entity 16852
      stereocilium base 5
Path 2
Term Annotations click to browse term
  cellular_component 16940
    cellular anatomical entity 16852
      cell projection 2348
        plasma membrane bounded cell projection 2296
          neuron projection 1524
            stereocilium 60
              stereocilium base 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.