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ONTOLOGY REPORT - ANNOTATIONS

Term:stereocilium base
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Accession:GO:0120044 term browser browse the term
Definition:The tapered base of the stereocilium adjacent to where it joins the hair cell body. This region contains a rootlet comprised of bundled actin filaments which spans the joint and stabilizes the stereocilium.
Synonyms:exact_synonym: stereocilium taper

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stereocilium base term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 IBA
ISO		 PMID:21873635
(MGI:6278501|PMID:30380417)		 RGD PMID:30380417, PMID:21873635 MGI:6278501, RGD:13792537 NCBI chr18:36,308,925...36,334,643
Ensembl chr18:36,308,925...36,322,320 		JBrowse link
G Myo7a myosin VIIA ISO (MGI:3714249|PMID:17567809) RGD PMID:17567809 MGI:3714249 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508 		JBrowse link
G Pjvk pejvakin ISO (MGI:5887150|PMID:28209736) RGD PMID:28209736 MGI:5887150 NCBI chr 3:63,508,386...63,518,163
Ensembl chr 3:63,510,293...63,518,147 		JBrowse link
G Tprn taperin ISO (MGI:5887150|PMID:28209736), (MGI:6278501|PMID:30380417) RGD PMID:28209736, PMID:30380417 MGI:5887150, MGI:6278501 NCBI chr 3:2,480,232...2,487,710
Ensembl chr 3:2,480,232...2,487,710 		JBrowse link
G Triobp TRIO and F-actin binding protein ISO (MGI:4881391|PMID:20510926), (MGI:5887150|PMID:28209736) RGD PMID:20510926, PMID:28209736 MGI:4881391, MGI:5887150 NCBI chr 7:120,173,892...120,237,145
Ensembl chr 7:120,176,530...120,230,420 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      stereocilium base 5
Path 2
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      cell projection 2550
        plasma membrane bounded cell projection 2479
          neuron projection 1660
            stereocilium 62
              stereocilium base 5
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.