ONTOLOGY REPORT - ANNOTATIONS |
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Term: | RNA decapping |
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Accession: | GO:0110154
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browse the term
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Definition: | Cleavage of the 5'-cap of an RNA. |
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Nudt17
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nudix hydrolase 17
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involved_in
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ISO
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(PMID:23353937)
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RGD |
PMID:23353937 |
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NCBI chr 2:186,930,305...186,932,797
Ensembl chr 2:186,930,305...186,932,797
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G
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Nudt3
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nudix hydrolase 3
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involved_in
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ISS IEA ISO
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GO_REF:0000024 GO_REF:0000107 (PMID:23353937) (PMID:26932476), (PMID:32727897)
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UniProt Ensembl RGD |
PMID:23353937 PMID:26932476 PMID:32727897 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr20:5,634,345...5,686,950
Ensembl chr20:5,636,184...5,688,754
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G
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Caprin1
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cell cycle associated protein 1
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acts_upstream_of_or_within
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ISO
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(PMID:31439799)
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RGD |
PMID:31439799 |
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NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:110,606,489...110,685,562
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G
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Cnot7
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CCR4-NOT transcription complex, subunit 7
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involved_in acts_upstream_of_or_within
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ISO IEA
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(PMID:31439799) GO_REF:0000107 MGI:109382 (PMID:18625844)
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RGD Ensembl |
PMID:18625844 PMID:31439799 |
GO_REF:0000107 |
NCBI chr16:58,478,882...58,498,046
Ensembl chr16:58,478,900...58,498,046
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Csnk2a1
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casein kinase 2 alpha 1
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acts_upstream_of_or_within
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ISO
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(PMID:31439799)
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RGD |
PMID:31439799 |
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NCBI chr 3:161,170,295...161,217,073
Ensembl chr 3:161,170,405...161,215,698
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G
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Dcp1a
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decapping mRNA 1A
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr16:5,663,437...5,708,623
Ensembl chr16:5,663,203...5,708,618
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Dcp1b
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decapping mRNA 1B
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr 4:154,030,181...154,068,038
Ensembl chr 4:154,030,690...154,068,035
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Dcp2
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decapping mRNA 2
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr18:37,001,615...37,037,949
Ensembl chr18:37,001,615...37,049,939
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Dcps
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decapping enzyme, scavenger
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involved_in
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IEA IBA
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GO_REF:0000002 GO_REF:0000033 GO_REF:0000104
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InterPro GO_Central UniProt |
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GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 |
NCBI chr 8:41,729,507...41,782,222
Ensembl chr 8:41,724,563...41,782,222
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Epha4
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Eph receptor A4
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acts_upstream_of_or_within
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ISO
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(PMID:31439799)
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RGD |
PMID:31439799 |
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NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:86,263,982...86,406,755
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Fmr1
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fragile X messenger ribonucleoprotein 1
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acts_upstream_of_or_within
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ISO
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(PMID:31439799)
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RGD |
PMID:31439799 |
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NCBI chr X:152,284,857...152,322,686
Ensembl chr X:152,284,841...152,322,675
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G
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Lsm1
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LSM1 homolog, mRNA degradation associated
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr16:72,980,075...72,991,581
Ensembl chr16:72,979,686...73,022,396
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Noct
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nocturnin
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acts_upstream_of_or_within
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ISO IEA
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MGI:1298230 (PMID:18625844) GO_REF:0000107
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RGD Ensembl |
PMID:18625844 |
GO_REF:0000107 |
NCBI chr 2:137,422,074...137,442,282
Ensembl chr 2:137,422,074...137,442,282
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Pan3
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poly(A) specific ribonuclease subunit PAN3
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acts_upstream_of_or_within
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ISO
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(PMID:18625844)
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RGD |
PMID:18625844 |
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NCBI chr12:12,512,835...12,637,066
Ensembl chr12:12,512,835...12,631,492
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G
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Patl1
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PAT1 homolog 1, processing body mRNA decay factor
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involved_in
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ISO IEA IBA ISS
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(PMID:20584987), (PMID:20852261) GO_REF:0000107 GO_REF:0000033 GO_REF:0000002 GO_REF:0000024
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RGD Ensembl GO_Central InterPro UniProt |
PMID:20584987 PMID:20852261 |
GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:218,255,801...218,287,662
Ensembl chr 1:218,255,848...218,287,657
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Patl2
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PAT1 homolog 2
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr 3:129,526,563...129,543,267
Ensembl chr 3:129,527,845...129,537,486
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St3gal4
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ST3 beta-galactoside alpha-2,3-sialyltransferase 4
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involved_in
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IEA
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GO_REF:0000002 GO_REF:0000104
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InterPro UniProt |
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GO_REF:0000002 GO_REF:0000104 |
NCBI chr 8:41,673,510...41,723,158
Ensembl chr 8:41,673,510...41,712,551
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Dcp1a
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decapping mRNA 1A
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr16:5,663,437...5,708,623
Ensembl chr16:5,663,203...5,708,618
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G
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Dcp1b
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decapping mRNA 1B
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involved_in
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IBA
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GO_REF:0000033
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GO_Central |
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GO_REF:0000033 |
NCBI chr 4:154,030,181...154,068,038
Ensembl chr 4:154,030,690...154,068,035
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Edc3
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enhancer of mRNA decapping 3
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involved_in
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IBA IEA
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GO_REF:0000033 GO_REF:0000002
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GO_Central InterPro |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr 8:67,002,032...67,047,563
Ensembl chr 8:67,002,014...67,047,559
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Edc4
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enhancer of mRNA decapping 4
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involved_in
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IEA IBA
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GO_REF:0000002 GO_REF:0000033
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InterPro GO_Central |
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GO_REF:0000002 GO_REF:0000033 |
NCBI chr19:33,774,062...33,786,054
Ensembl chr19:50,683,897...50,697,620
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Dcp1a
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decapping mRNA 1A
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involved_in
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ISO IEA
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(PMID:12417715) GO_REF:0000107
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RGD Ensembl |
PMID:12417715 |
GO_REF:0000107 |
NCBI chr16:5,663,437...5,708,623
Ensembl chr16:5,663,203...5,708,618
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Dcps
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decapping enzyme, scavenger
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involved_in
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ISO IEA
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(PMID:26049109) GO_REF:0000117 GO_REF:0000107
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RGD UniProt Ensembl |
PMID:26049109 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 8:41,729,507...41,782,222
Ensembl chr 8:41,724,563...41,782,222
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G
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Nudt12
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nudix hydrolase 12
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involved_in
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ISO IEA
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(PMID:31875550) GO_REF:0000107
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RGD Ensembl |
PMID:31875550 |
GO_REF:0000107 |
NCBI chr 9:106,188,930...106,202,340
Ensembl chr 9:106,189,661...106,202,340
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G
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St3gal4
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ST3 beta-galactoside alpha-2,3-sialyltransferase 4
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involved_in
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IEA
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GO_REF:0000107 GO_REF:0000117
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Ensembl UniProt |
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GO_REF:0000107 GO_REF:0000117 |
NCBI chr 8:41,673,510...41,723,158
Ensembl chr 8:41,673,510...41,712,551
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Dxo
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decapping exoribonuclease
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involved_in
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ISS IEA ISO IBA
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GO_REF:0000024 GO_REF:0000107 (PMID:28283058), (PMID:32374864) GO_REF:0000033 (PMID:28283058), (PMID:31101919)
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UniProt Ensembl RGD GO_Central |
PMID:28283058 PMID:31101919 PMID:32374864 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr20:3,993,322...3,995,484
Ensembl chr20:3,997,955...4,000,037
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Nudt12
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nudix hydrolase 12
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involved_in
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ISO IEA
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(PMID:31101919), (PMID:31875550) GO_REF:0000117 GO_REF:0000107 (PMID:31101919), (PMID:32432673)
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RGD UniProt Ensembl |
PMID:31101919 PMID:31875550 PMID:32432673 |
GO_REF:0000107 GO_REF:0000117 |
NCBI chr 9:106,188,930...106,202,340
Ensembl chr 9:106,189,661...106,202,340
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Nudt16
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nudix hydrolase 16
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involved_in
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ISO
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(PMID:32432673)
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RGD |
PMID:32432673 |
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NCBI chr 8:114,618,706...114,620,761
Ensembl chr 8:114,618,725...114,620,951
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G
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Eif4enif1
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eukaryotic translation initiation factor 4E nuclear import factor 1
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involved_in
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ISO IEA
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(PMID:32354837) GO_REF:0000107
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RGD Ensembl |
PMID:32354837 |
GO_REF:0000107 |
NCBI chr14:82,280,566...82,328,559
Ensembl chr14:82,280,748...82,323,242
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Zfp36
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zinc finger protein 36
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involved_in
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ISS ISO IEA
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GO_REF:0000024 (PMID:16364915) GO_REF:0000107
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UniProt RGD Ensembl |
PMID:16364915 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:92,796,628...92,799,108
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G
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Caprin1
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cell cycle associated protein 1
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involved_in
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ISS IEA ISO
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GO_REF:0000024 GO_REF:0000107 (PMID:31439799)
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UniProt Ensembl RGD |
PMID:31439799 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 3:110,606,489...110,685,408
Ensembl chr 3:110,606,489...110,685,562
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Term paths to the root
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