ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of biomineralization |
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Accession: | GO:0110149
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browse the term
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Definition: | Any process that modulates the frequency, rate or extent of biomineralization, the formation and deposition of mineral crystals by living organisms. |
Synonyms: | exact_synonym: | regulation of biomineralisation; regulation of mineralisation; regulation of mineralization |
| narrow_synonym: | regulation of biomineral formation |
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Gas6 |
growth arrest specific 6 |
involved_in |
ISO ISS |
(PMID:20048160) GO_REF:0000024 |
RGD UniProt |
PMID:20048160 |
GO_REF:0000024 |
NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
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Hey1 |
hes-related family bHLH transcription factor with YRPW motif 1 |
involved_in |
ISO |
(MGI:6158746|PMID:22110751) |
RGD |
PMID:22110751 |
MGI:6158746 |
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2 |
hes-related family bHLH transcription factor with YRPW motif 2 |
involved_in |
ISO |
(MGI:6158746|PMID:22110751) |
RGD |
PMID:22110751 |
MGI:6158746 |
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Nos3 |
nitric oxide synthase 3 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:6158885|PMID:23583836) |
Ensembl RGD |
PMID:23583836 |
GO_REF:0000107 MGI:6158885 |
NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
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Notch1 |
notch receptor 1 |
involved_in |
ISO |
(MGI:6158728|PMID:26491108), (MGI:6158885|PMID:23583836) |
RGD |
PMID:23583836 PMID:26491108 |
MGI:6158728 MGI:6158885 |
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Rock1 |
Rho-associated coiled-coil containing protein kinase 1 |
involved_in |
ISO |
UniProtKB:M3TYT0 (PMID:26634652) |
RGD |
PMID:26634652 |
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NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
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Rock2 |
Rho-associated coiled-coil containing protein kinase 2 |
involved_in |
ISO |
UniProtKB:I3LFH3 (PMID:26634652) |
RGD |
PMID:26634652 |
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NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
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Sox9 |
SRY-box transcription factor 9 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4947506|PMID:20056916) (PMID:22110751) |
UniProt RGD |
PMID:20056916 PMID:22110751 |
GO_REF:0000024 MGI:4947506 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Tgfb1 |
transforming growth factor, beta 1 |
involved_in |
ISO |
(PMID:26634652) (MGI:5921830|PMID:26634652) |
RGD |
PMID:26634652 |
MGI:5921830 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Ucma |
upper zone of growth plate and cartilage matrix associated |
acts_upstream_of |
ISO |
MGI:5314628 (MGI:6163471|PMID:29563538) |
RGD |
PMID:29563538 |
MGI:6163471 |
NCBI chr17:73,293,977...73,303,728
Ensembl chr17:73,293,978...73,303,611
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Ahsg |
alpha-2-HS-glycoprotein |
involved_in |
IMP ISO ISS |
(MGI:3687916|PMID:12556469) GO_REF:0000024 |
RGD UniProt |
PMID:12556469 PMID:8702833 |
GO_REF:0000024 MGI:3687916, RGD:1626074 |
NCBI chr11:78,117,903...78,145,956
Ensembl chr11:78,117,918...78,145,999
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Bcor |
BCL6 co-repressor |
involved_in |
ISO |
(PMID:19578371) |
RGD |
PMID:19578371 |
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NCBI chr X:10,609,756...10,729,613
Ensembl chr X:10,687,732...10,729,613
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Ccl3 |
C-C motif chemokine ligand 3 |
involved_in |
ISO |
(PMID:21403648) |
RGD |
PMID:21403648 |
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NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
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Ccr1 |
C-C motif chemokine receptor 1 |
involved_in |
ISO |
(PMID:21403648) |
RGD |
PMID:21403648 |
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NCBI chr 8:123,556,286...123,561,841
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Ccr1l1 |
chemokine (C-C motif) receptor 1-like 1 |
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
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GO_REF:0000107 |
NCBI chr 8:123,589,997...123,613,767
Ensembl chr 8:123,589,621...123,612,687
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Ecm1 |
extracellular matrix protein 1 |
involved_in |
ISO ISS |
(PMID:11165938) GO_REF:0000024 |
RGD UniProt |
PMID:11165938 |
GO_REF:0000024 |
NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
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Enpp1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5607146|PMID:25479107), (MGI:6220772|PMID:30111653), (MGI:6294341|PMID:22510396) |
UniProt RGD |
PMID:22510396 PMID:25479107 PMID:30111653 |
GO_REF:0000024 MGI:5607146 MGI:6220772 MGI:6294341 |
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Fgf23 |
fibroblast growth factor 23 |
involved_in |
ISO |
(PMID:18282132) |
RGD |
PMID:18282132 |
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NCBI chr 4:159,914,393...159,922,073
Ensembl chr 4:159,914,272...159,923,821
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Gata1 |
GATA binding protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:2177586 (MGI:3653541|PMID:15005853) |
RGD |
PMID:15005853 |
MGI:3653541 |
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
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Grem1 |
gremlin 1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:15539560) |
RGD |
PMID:15539560 |
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NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
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Hif1a |
hypoxia inducible factor 1 subunit alpha |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857719 (MGI:3777866|PMID:17181398) |
Ensembl RGD |
PMID:17181398 |
GO_REF:0000107 MGI:3777866 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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Ltbp3 |
latent transforming growth factor beta binding protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:2180017 (MGI:2178869|PMID:11790802) |
RGD |
PMID:11790802 |
MGI:2178869 |
NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
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Mepe |
matrix extracellular phosphoglycoprotein |
acts_upstream_of_or_within |
ISO |
MGI:2448895 (MGI:2448336|PMID:12421822), (MGI:3851320|PMID:15843468), (MGI:5431257|PMID:22766095) |
RGD |
PMID:12421822 PMID:15843468 PMID:22766095 |
MGI:2448336 MGI:3851320 MGI:5431257 |
NCBI chr14:5,420,634...5,432,186
Ensembl chr14:5,420,635...5,432,183
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Nfe2 |
nuclear factor, erythroid 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857224 (MGI:3653541|PMID:15005853) |
RGD |
PMID:15005853 |
MGI:3653541 |
NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108
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Ptk2b |
protein tyrosine kinase 2 beta |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3713957|PMID:17537919) |
UniProt RGD |
PMID:17537919 |
GO_REF:0000024 MGI:3713957 |
NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
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Sox9 |
SRY-box transcription factor 9 |
acts_upstream_of_or_within |
ISO |
MGI:2158693 (MGI:2135696|PMID:11371614) |
RGD |
PMID:11371614 |
MGI:2135696 |
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Srgn |
serglycin |
involved_in |
IBA ISS ISO |
PMID:21873635 GO_REF:0000024 (PMID:16870619) |
UniProt RGD |
PMID:16870619 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr20:30,442,810...30,479,549
Ensembl chr20:30,442,813...30,457,406
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Trpm4 |
transient receptor potential cation channel, subfamily M, member 4 |
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IMP |
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RGD |
PMID:23081848 |
RGD:10003033 |
NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532
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Grem1 |
gremlin 1, DAN family BMP antagonist |
involved_in |
ISO |
(PMID:15539560) |
RGD |
PMID:15539560 |
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NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
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Pth |
parathyroid hormone |
involved_in |
IMP |
PMID:11604398 |
CAFA |
PMID:11604398 |
RGD:12793028 |
NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
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Rflna |
refilin A |
acts_upstream_of_or_within |
ISO |
MGI:1923816 (MGI:5570967|PMID:24436304) |
RGD |
PMID:24436304 |
MGI:5570967 |
NCBI chr12:31,633,361...31,642,317
Ensembl chr12:31,633,361...31,642,317
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Rflnb |
refilin B |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:1920371 (MGI:5570967|PMID:24436304) |
RGD |
PMID:24436304 PMID:21873635 |
MGI:5570967, RGD:13792537 |
NCBI chr10:60,893,693...60,899,970
Ensembl chr10:60,893,713...60,899,976
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Aspn |
asporin |
involved_in |
ISO |
(MGI:3722035|PMID:17522060) |
RGD |
PMID:17522060 |
MGI:3722035 |
NCBI chr17:15,079,910...15,104,369
Ensembl chr17:15,080,639...15,104,041
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Bcor |
BCL6 co-repressor |
involved_in |
ISO |
(PMID:19578371) |
RGD |
PMID:19578371 |
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NCBI chr X:10,609,756...10,729,613
Ensembl chr X:10,687,732...10,729,613
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Amtn |
amelotin |
involved_in |
ISO |
(PMID:25407797) |
RGD |
PMID:25407797 |
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NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
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Atf4 |
activating transcription factor 4 |
acts_upstream_of_or_within |
ISO |
MGI:2180373|MGI:3819270|MGI:5550363|MGI:5812282 (MGI:5812283|PMID:27812542) |
RGD |
PMID:27812542 |
MGI:5812283 |
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
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Cebpb |
CCAAT/enhancer binding protein beta |
acts_upstream_of_or_within |
ISO |
(PMID:27812542) |
RGD |
PMID:27812542 |
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NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
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Fbxo5 |
F-box protein 5 |
involved_in |
ISO |
(PMID:29850565) |
RGD |
PMID:29850565 |
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NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437
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Odaph |
odontogenesis associated phosphoprotein |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:22901946) |
UniProt RGD |
PMID:22901946 |
GO_REF:0000024 |
NCBI chr14:16,071,835...16,084,210
Ensembl chr14:16,073,058...16,080,129
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Fbln7 |
fibulin 7 |
acts_upstream_of_or_within |
ISO |
MGI:6360596 (MGI:6279558|PMID:29730503) |
RGD |
PMID:29730503 |
MGI:6279558 |
NCBI chr 3:116,111,581...116,145,839
Ensembl chr 3:116,111,677...116,147,983
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Acvr1 |
activin A receptor type 1 |
involved_in |
ISO |
(PMID:18436533) |
RGD |
PMID:18436533 |
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NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
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Acvr2a |
activin A receptor type 2A |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:18436533) |
Ensembl RGD |
PMID:18436533 |
GO_REF:0000107 |
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
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Acvr2b |
activin A receptor type 2B |
involved_in |
ISO |
(PMID:18436533) |
RGD |
PMID:18436533 |
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NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
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Adgrv1 |
adhesion G protein-coupled receptor V1 |
involved_in |
ISO |
(MGI:6211994|PMID:22419726) |
RGD |
PMID:22419726 |
MGI:6211994 |
NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
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Adrb2 |
adrenoceptor beta 2 |
acts_upstream_of_or_within |
ISO |
MGI:1859675 (MGI:3575849|PMID:15724149) |
RGD |
PMID:15724149 |
MGI:3575849 |
NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
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Alox5 |
arachidonate 5-lipoxygenase |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:6393219|PMID:24906289) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:24906289 |
GO_REF:0000024 GO_REF:0000107 MGI:6393219 |
NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
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Ano6 |
anoctamin 6 |
involved_in |
ISO |
(PMID:25589784) (MGI:5634871|PMID:25589784) |
RGD |
PMID:25589784 |
MGI:5634871 |
NCBI chr 7:126,933,629...127,113,589
Ensembl chr 7:126,933,936...127,113,589
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Atp2b1 |
ATPase plasma membrane Ca2+ transporting 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5780494|PMID:26392310) |
UniProt RGD |
PMID:26392310 |
GO_REF:0000024 MGI:5780494 |
NCBI chr 7:33,735,595...33,845,226
Ensembl chr 7:33,735,871...33,843,295
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Atraid |
all-trans retinoic acid-induced differentiation factor |
involved_in |
ISO |
(PMID:21723284) |
RGD |
PMID:21723284 |
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NCBI chr 6:25,315,236...25,319,804
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Bmp2 |
bone morphogenetic protein 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5009350|PMID:20675382) (PMID:18436533), (PMID:20576608) |
UniProt RGD |
PMID:18436533 PMID:20576608 PMID:20675382 |
GO_REF:0000024 MGI:5009350 |
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of_or_within involved_in |
IDA ISO ISS IEA |
(PMID:14749725) GO_REF:0000024 (PMID:14749725), (PMID:18436533) GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:14749725 PMID:18436533 PMID:15352071 |
GO_REF:0000024 GO_REF:0000107, RGD:9068399 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Bmp6 |
bone morphogenetic protein 6 |
involved_in |
ISO |
(PMID:18436533) |
RGD |
PMID:18436533 |
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NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
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Bmp7 |
bone morphogenetic protein 7 |
involved_in |
ISO |
(PMID:18436533) |
RGD |
PMID:18436533 |
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NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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Bmpr1a |
bone morphogenetic protein receptor type 1A |
involved_in |
ISO |
(PMID:18436533) |
RGD |
PMID:18436533 |
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NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Bmpr1b |
bone morphogenetic protein receptor type 1B |
involved_in |
ISO |
(PMID:18436533) |
RGD |
PMID:18436533 |
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NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
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Bmpr2 |
bone morphogenetic protein receptor type 2 |
involved_in |
ISO |
(PMID:18436533) |
RGD |
PMID:18436533 |
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NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
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Ccn1 |
cellular communication network factor 1 |
involved_in |
ISO |
(PMID:20675382) |
RGD |
PMID:20675382 |
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NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
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Cd276 |
Cd276 molecule |
acts_upstream_of_or_within |
ISO |
MGI:3033707 (MGI:3052626|PMID:15317945) |
RGD |
PMID:15317945 |
MGI:3052626 |
NCBI chr 8:58,937,751...58,968,082
Ensembl chr 8:58,937,751...58,968,380
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Csf1r |
colony stimulating factor 1 receptor |
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IMP |
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RGD |
PMID:18434589 |
RGD:151665814 |
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
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Fam20c |
FAM20C, golgi associated secretory pathway kinase |
acts_upstream_of_or_within |
ISO |
(MGI:3715055|PMID:17369251), (MGI:5427766|PMID:22615579) |
RGD |
PMID:17369251 PMID:22615579 |
MGI:3715055 MGI:5427766 |
NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
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Fbn2 |
fibrillin 2 |
involved_in |
ISO |
(MGI:4836762|PMID:20855508) |
RGD |
PMID:20855508 |
MGI:4836762 |
NCBI chr18:51,499,737...51,703,976
Ensembl chr18:51,499,737...51,703,976
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Fgfr3 |
fibroblast growth factor receptor 3 |
acts_upstream_of_or_within |
ISO |
MGI:2135670 (MGI:4437389|PMID:20053668) |
RGD |
PMID:20053668 |
MGI:4437389 |
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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Fzd9 |
frizzled class receptor 9 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4943600|PMID:21402791) |
UniProt RGD |
PMID:21402791 |
GO_REF:0000024 MGI:4943600 |
NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398
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Gpm6b |
glycoprotein m6b |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:21638316) |
UniProt Ensembl RGD |
PMID:21638316 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:28,057,788...28,204,409
Ensembl chr X:28,059,450...28,204,211
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Isg15 |
ISG15 ubiquitin-like modifier |
involved_in |
ISO |
(MGI:4943600|PMID:21402791) |
RGD |
PMID:21402791 |
MGI:4943600 |
NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435
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Kl |
Klotho |
involved_in |
ISO IEA |
(PMID:12110410) GO_REF:0000107 |
RGD Ensembl |
PMID:12110410 |
GO_REF:0000107 |
NCBI chr12:490,402...531,417
Ensembl chr12:490,399...530,080
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Mef2c |
myocyte enhancer factor 2C |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5285459|PMID:21652706) |
UniProt RGD |
PMID:21652706 |
GO_REF:0000024 MGI:5285459 |
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
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Mia3 |
MIA SH3 domain ER export factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:5007248 (MGI:5008683|PMID:21606205) |
RGD |
PMID:21606205 |
MGI:5008683 |
NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972
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Nell1 |
neural EGFL like 1 |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:21723284) |
UniProt Ensembl RGD |
PMID:21723284 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860
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Osr1 |
odd-skipped related transcription factor 1 |
involved_in |
ISO |
UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) |
RGD |
PMID:21262216 |
MGI:4950000 |
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
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Osr2 |
odd-skipped related transciption factor 2 |
involved_in |
ISO |
UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) |
RGD |
PMID:21262216 |
MGI:4950000 |
NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
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P2rx7 |
purinergic receptor P2X 7 |
acts_upstream_of_or_within |
ISO |
MGI:2386080 (MGI:2667237|PMID:12677010), (MGI:3797675|PMID:18519738) |
RGD |
PMID:12677010 PMID:18519738 |
MGI:2667237 MGI:3797675 |
NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
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Pkdcc |
protein kinase domain containing, cytoplasmic |
involved_in |
ISO |
(MGI:3813934|PMID:19097194) |
RGD |
PMID:19097194 |
MGI:3813934 |
NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556
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Pla2g4a |
phospholipase A2 group IVA |
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IEP |
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RGD |
PMID:10807497 |
RGD:1642474 |
NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
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Pth |
parathyroid hormone |
involved_in |
IDA ISO |
(PMID:17696759) |
RGD |
PMID:17696759 PMID:15758479 PMID:22445539 |
RGD:7207452, RGD:7242906 |
NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
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Ptn |
pleiotrophin |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6294181|PMID:19442624) |
UniProt RGD |
PMID:19442624 |
GO_REF:0000024 MGI:6294181 |
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
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Slc8a1 |
solute carrier family 8 member A1 |
involved_in |
ISO |
(PMID:25589784) |
RGD |
PMID:25589784 |
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NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
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Smad3 |
SMAD family member 3 |
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IDA |
rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity |
RGD |
PMID:12096832 |
RGD:727387 |
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
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Tent5a |
terminal nucleotidyltransferase 5A |
involved_in |
ISO |
(MGI:6717031|PMID:33882302) |
RGD |
PMID:33882302 |
MGI:6717031 |
NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045
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Tfap2a |
transcription factor AP-2 alpha |
involved_in |
ISO ISS |
(PMID:19578371) GO_REF:0000024 |
RGD UniProt |
PMID:19578371 |
GO_REF:0000024 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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Tgfb1 |
transforming growth factor, beta 1 |
involved_in |
ISO ISS |
(PMID:17401695) GO_REF:0000024 |
RGD AgBase |
PMID:17401695 |
GO_REF:0000024 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Tgfb3 |
transforming growth factor, beta 3 |
involved_in |
ISO ISS |
(PMID:17401695) GO_REF:0000024 |
RGD AgBase |
PMID:17401695 |
GO_REF:0000024 |
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
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Tmem119 |
transmembrane protein 119 |
involved_in |
ISO IBA |
(PMID:20025746) (MGI:4418582|PMID:20025746), (MGI:5700277|PMID:26207632) PMID:21873635 |
RGD |
PMID:20025746 PMID:26207632 PMID:21873635 |
MGI:4418582 MGI:5700277, RGD:13792537 |
NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689
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Wnt10b |
Wnt family member 10B |
acts_upstream_of_or_within |
ISO |
(MGI:3574150|PMID:15728361) |
RGD |
PMID:15728361 |
MGI:3574150 |
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
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Wnt4 |
Wnt family member 4 |
involved_in |
ISO IEA |
(PMID:17720811) GO_REF:0000107 |
RGD Ensembl |
PMID:17720811 |
GO_REF:0000107 |
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
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Actn3 |
actinin alpha 3 |
involved_in |
ISO |
(MGI:5291888|PMID:21784188) |
RGD |
PMID:21784188 |
MGI:5291888 |
NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
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Asxl2 |
ASXL transcriptional regulator 2 |
acts_upstream_of_or_within |
ISO |
MGI:3840841 (MGI:5514358|PMID:21490954) |
RGD |
PMID:21490954 |
MGI:5514358 |
NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
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Amtn |
amelotin |
involved_in |
IBA ISS ISO |
PMID:21873635 GO_REF:0000024 (MGI:5613837|PMID:25407797) |
UniProt RGD |
PMID:25407797 PMID:21873635 |
GO_REF:0000024 MGI:5613837, RGD:13792537 |
NCBI chr14:19,648,624...19,661,181
Ensembl chr14:19,648,625...19,661,181
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Cftr |
CF transmembrane conductance regulator |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:6716964|PMID:26403673) |
Ensembl RGD |
PMID:26403673 |
GO_REF:0000107 MGI:6716964 |
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
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Dspp |
dentin sialophosphoprotein |
acts_upstream_of_or_within |
ISO |
(MGI:3603472|PMID:16014627) |
RGD |
PMID:16014627 |
MGI:3603472 |
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
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Enam |
enamelin |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:3796583 (MGI:5647983|PMID:24603688) |
RGD |
PMID:24603688 PMID:21873635 |
MGI:5647983, RGD:13792537 |
NCBI chr14:19,556,729...19,581,433
Ensembl chr14:19,556,729...19,581,425
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Odaph |
odontogenesis associated phosphoprotein |
involved_in |
ISO ISS IBA |
(PMID:22901946) GO_REF:0000024 PMID:21873635 |
RGD UniProt |
PMID:22901946 PMID:21873635 |
GO_REF:0000024, RGD:13792537 |
NCBI chr14:16,071,835...16,084,210
Ensembl chr14:16,073,058...16,080,129
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Slc4a2 |
solute carrier family 4 member 2 |
involved_in |
ISO |
(MGI:6716964|PMID:26403673) |
RGD |
PMID:26403673 |
MGI:6716964 |
NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
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Tfap2a |
transcription factor AP-2 alpha |
involved_in |
ISO ISS |
(PMID:19578371) GO_REF:0000024 |
RGD UniProt |
PMID:19578371 |
GO_REF:0000024 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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Wnt6 |
Wnt family member 6 |
involved_in |
ISO |
(PMID:20113781) |
RGD |
PMID:20113781 |
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NCBI chr 9:76,329,882...76,343,523
Ensembl chr 9:76,329,882...76,343,523
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Ankh |
ANKH inorganic pyrophosphate transport regulator |
acts_upstream_of_or_within involved_in |
TAS ISO ISS |
MGI:1856651 (MGI:1860991|PMID:10894769), (MGI:55055|PMID:7276519) GO_REF:0000024 |
RGD UniProt |
PMID:7276519 PMID:10894769 PMID:12861042 |
GO_REF:0000024 MGI:1860991 MGI:55055, RGD:634632 |
NCBI chr 2:78,153,027...78,280,181
Ensembl chr 2:78,153,026...78,280,187
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Bglap |
bone gamma-carboxyglutamate protein |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495
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Bmp2k |
BMP-2 inducible kinase |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:2153232|PMID:11500515) |
RGD |
PMID:11500515 PMID:21873635 |
MGI:2153232, RGD:13792537 |
NCBI chr14:12,481,194...12,579,411
Ensembl chr14:12,484,729...12,579,134
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Comp |
cartilage oligomeric matrix protein |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:5318950|PMID:21350216) |
Ensembl RGD |
PMID:21350216 |
GO_REF:0000107 MGI:5318950 |
NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
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Cyp27b1 |
cytochrome P450, family 27, subfamily b, polypeptide 1 |
involved_in |
ISO IEA |
(PMID:9415400) GO_REF:0000107 |
RGD Ensembl |
PMID:9415400 |
GO_REF:0000107 |
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
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Ddr2 |
discoidin domain receptor tyrosine kinase 2 |
involved_in |
ISO |
(PMID:20564243) |
RGD |
PMID:20564243 |
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NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
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Dmp1 |
dentin matrix acidic phosphoprotein 1 |
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TAS |
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RGD |
PMID:8509401 |
RGD:728616 |
NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
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Ecm1 |
extracellular matrix protein 1 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:4452294|PMID:20138147) |
RGD |
PMID:20138147 PMID:21873635 |
MGI:4452294, RGD:13792537 |
NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671
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Enpp1 |
ectonucleotide pyrophosphatase/phosphodiesterase 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Fgf23 |
fibroblast growth factor 23 |
acts_upstream_of_or_within |
ISO |
MGI:3512143 (MGI:3510566|PMID:15579309) |
RGD |
PMID:15579309 |
MGI:3510566 |
NCBI chr 4:159,914,393...159,922,073
Ensembl chr 4:159,914,272...159,923,821
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Gja1 |
gap junction protein, alpha 1 |
acts_upstream_of_or_within |
ISO |
MGI:2445468|MGI:3776013 (MGI:5317265|PMID:21346198) |
RGD |
PMID:21346198 |
MGI:5317265 |
NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
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Matn1 |
matrilin 1 |
acts_upstream_of_or_within |
ISO |
MGI:2153042|MGI:3663272 (MGI:3655339|PMID:16877353) |
RGD |
PMID:16877353 |
MGI:3655339 |
NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059
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Mgp |
matrix Gla protein |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667
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Nbr1 |
NBR1, autophagy cargo receptor |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4818844|PMID:20616007) |
Ensembl RGD |
PMID:20616007 |
GO_REF:0000107 MGI:4818844 |
NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412
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Notum |
NOTUM, palmitoleoyl-protein carboxylesterase |
acts_upstream_of_or_within |
ISO |
(MGI:6303810|PMID:30622831) (PMID:30622831) |
RGD |
PMID:30622831 |
MGI:6303810 |
NCBI chr10:105,933,245...105,940,315
Ensembl chr10:105,933,249...105,940,315
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Omd |
osteomodulin |
involved_in |
NAS IEA |
GO_REF:0000002 |
InterPro RGD |
PMID:10607915 |
GO_REF:0000002, RGD:633418 |
NCBI chr17:15,060,217...15,068,441
Ensembl chr17:15,060,217...15,068,441
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S1pr1 |
sphingosine-1-phosphate receptor 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3839226|PMID:19204730) |
UniProt RGD |
PMID:19204730 |
GO_REF:0000024 MGI:3839226 |
NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
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Sgms2 |
sphingomyelin synthase 2 |
involved_in |
ISO ISS |
(PMID:30779713) GO_REF:0000024 |
RGD UniProt |
PMID:30779713 |
GO_REF:0000024 |
NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546
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Suv39h1 |
SUV39H1 histone lysine methyltransferase |
acts_upstream_of_or_within |
ISO |
MGI:1890508 (MGI:5913114|PMID:23695662) |
RGD |
PMID:23695662 |
MGI:5913114 |
NCBI chr X:14,421,028...14,434,216
Ensembl chr X:14,421,109...14,433,982
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Suv39h1-ps1 |
SUV39H1 histone lysine methyltransferase, pseudogene 1 |
acts_upstream_of_or_within |
ISO |
MGI:1890508 (MGI:5913114|PMID:23695662) |
RGD |
PMID:23695662 |
MGI:5913114 |
NCBI chr X:141,793,695...141,795,558
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Twist1 |
twist family bHLH transcription factor 1 |
involved_in |
ISO |
(PMID:19597909) |
RGD |
PMID:19597909 |
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NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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Txlng |
taxilin gamma |
involved_in |
ISO |
(MGI:3587454|PMID:15911876), (MGI:5306578|PMID:19016261) |
RGD |
PMID:15911876 PMID:19016261 |
MGI:3587454 MGI:5306578 |
NCBI chr X:31,864,066...31,912,931
Ensembl chr X:31,864,111...31,912,926
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Zmpste24 |
zinc metallopeptidase STE24 |
acts_upstream_of_or_within |
ISO |
MGI:1099440 (MGI:5913114|PMID:23695662) |
RGD |
PMID:23695662 |
MGI:5913114 |
NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
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Dicer1 |
dicer 1 ribonuclease III |
acts_upstream_of_or_within |
ISO |
MGI:3589208 (MGI:4453947|PMID:20102707) |
RGD |
PMID:20102707 |
MGI:4453947 |
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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Dmp1 |
dentin matrix acidic phosphoprotein 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3603472|PMID:16014627) |
RGD |
PMID:16014627 |
MGI:3603472 |
NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
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Term paths to the root
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