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ONTOLOGY REPORT - ANNOTATIONS

Term:mRNA alternative polyadenylation
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Accession:GO:0110104 term browser browse the term
Definition:The process of generating multiple mRNA molecules with variable 3'-end length formation from a given pre-mRNA by differential use of cleavage and polyadenylation signals (pA signals).

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mRNA alternative polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 involved_in ISO (PMID:20695905), (PMID:23187700), (PMID:29276085) UniProt PMID:20695905 PMID:23187700 PMID:29276085 NCBI chrNW_004624948:53,317...83,983
Ensembl chrNW_004624948:56,246...84,051 		JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 involved_in ISO (PMID:20695905), (PMID:29276085) UniProt PMID:20695905 PMID:29276085 NCBI chrNW_004624926:802,033...822,372 JBrowse link
G Nudt21 nudix hydrolase 21 involved_in ISO (PMID:17098938), (PMID:20695905), (PMID:23187700), (PMID:29276085) UniProt PMID:17098938 PMID:20695905 PMID:23187700 PMID:29276085 NCBI chrNW_004624757:115,249...130,775
Ensembl chrNW_004624757:114,844...130,097 		JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 ISO RGD PMID:34731606 RGD:329845875 NCBI chrNW_004624752:11,766,033...12,027,804
Ensembl chrNW_004624752:11,765,679...12,022,320 		JBrowse link
G Ythdc1 YTH N6-methyladenosine RNA binding protein C1 acts_upstream_of_or_within ISO (PMID:29799838) MGI PMID:29799838 NCBI chrNW_004624761:346,268...374,954 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17647
    cellular process 17219
      metabolic process 10996
        primary metabolic process 9827
          RNA processing 1557
            RNA 3'-end processing 89
              mRNA 3'-end processing 42
                mRNA alternative polyadenylation 5
                  positive regulation of mRNA alternative polyadenylation 0
                  regulation of mRNA alternative polyadenylation + 0
Path 2
Term Annotations click to browse term
  biological_process 17647
    cellular process 17219
      metabolic process 10996
        primary metabolic process 9827
          nucleobase-containing compound metabolic process 5857
            nucleic acid metabolic process 5350
              RNA metabolic process 4810
                RNA biosynthetic process 4612
                  RNA processing 1557
                    RNA 3'-end processing 89
                      mRNA 3'-end processing 42
                        mRNA alternative polyadenylation 5
                          positive regulation of mRNA alternative polyadenylation 0
                          regulation of mRNA alternative polyadenylation + 0
paths to the root