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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA strand resection involved in replication fork processing
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Accession:GO:0110025 term browser browse the term
Definition:The 5' to 3' exonucleolytic resection of DNA at the site of a stalled replication fork that contributes to replication fork processing.

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DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXO1 exonuclease 1 involved_in ISO (PMID:26240375) UniProt PMID:26240375 NCBI chr25:78,934,337...78,976,346
Ensembl chr25:78,934,459...78,976,219 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease involved_in ISO (MGI:3839734|PMID:18854157)
(PMID:18854157)
(PMID:27814491), (PMID:27889449), (PMID:29670289), (PMID:30464262), (PMID:30612738), (PMID:30787182), (PMID:37696958)		 UniProt PMID:18854157 PMID:27814491 PMID:27889449 PMID:29670289 PMID:30464262 More... MGI:3839734 NCBI chr 1:85,615,448...85,694,247
Ensembl chr 1:85,610,819...85,694,269 		JBrowse link
G NBN nibrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:85,017,807...85,069,219
Ensembl chr 8:85,015,752...85,069,028 		JBrowse link
G RAD50 RAD50 double strand break repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:35,375,206...35,458,801
Ensembl chr23:35,375,305...35,458,622 		JBrowse link
G RBBP8 RB binding protein 8, endonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:57,501,070...57,617,301
Ensembl chr18:57,501,271...57,597,670 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,641,634...57,699,685
Ensembl chr 2:57,639,046...57,699,525 		JBrowse link
negative regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLL1 dynein light chain LC8-type 1 involved_in ISO (PMID:30464262), (PMID:37696958) UniProt PMID:30464262 PMID:37696958 NCBI chr11:115,851,020...115,855,526
Ensembl chr11:115,851,381...115,851,647 		JBrowse link
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZNF365 zinc finger protein 365 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:68,872,683...68,900,911
Ensembl chr 9:68,871,827...68,900,724 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17106
    cellular process 16633
      metabolic process 11190
        macromolecule metabolic process 9238
          nucleic acid metabolic process 4866
            DNA metabolic process 911
              DNA strand resection involved in replication fork processing 8
                negative regulation of DNA strand resection involved in replication fork processing 1
                positive regulation of DNA strand resection involved in replication fork processing 0
                regulation of DNA strand resection involved in replication fork processing + 2
Path 2
Term Annotations click to browse term
  biological_process 17106
    cellular process 16633
      metabolic process 11190
        primary metabolic process 10005
          nucleobase-containing compound metabolic process 5387
            nucleic acid metabolic process 4866
              DNA metabolic process 911
                DNA replication 262
                  DNA-templated DNA replication 162
                    DNA-templated DNA replication maintenance of fidelity 56
                      replication fork processing 50
                        DNA strand resection involved in replication fork processing 8
                          negative regulation of DNA strand resection involved in replication fork processing 1
                          positive regulation of DNA strand resection involved in replication fork processing 0
                          regulation of DNA strand resection involved in replication fork processing + 2
paths to the root