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ONTOLOGY REPORT - ANNOTATIONS


Term:DNA strand resection involved in replication fork processing
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Accession:GO:0110025 term browser browse the term
Definition:The 5' to 3' exonucleolytic resection of DNA at the site of a stalled replication fork that contributes to replication fork processing.



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DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27814491), (PMID:27889449), (PMID:29670289), (PMID:30464262), (PMID:30787182), (PMID:37696958)
(MGI:3839734|PMID:18854157)
UniProt
Ensembl
RGD
PMID:18854157 PMID:27814491 PMID:27889449 PMID:29670289 PMID:30464262 More... GO_REF:0000024 GO_REF:0000107 MGI:3839734 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279
JBrowse link
G Nbn nibrin involved_in IEA
ISO
GO_REF:0000107
(PMID:27814491), (PMID:27889449), (PMID:30787182)
Ensembl
RGD
PMID:27814491 PMID:27889449 PMID:30787182 GO_REF:0000107 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO
GO_REF:0000107
(PMID:27889449)
Ensembl
RGD
PMID:27889449 GO_REF:0000107 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO (PMID:23273981), (PMID:27814491), (PMID:27889449), (PMID:30787182) RGD PMID:23273981 PMID:27814491 PMID:27889449 PMID:30787182 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:28834754), (PMID:29670289) RGD PMID:28834754 PMID:29670289 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386
JBrowse link
negative regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynll1 dynein light chain LC8-type 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:30464262), (PMID:37696958)
UniProt
RGD
PMID:30464262 PMID:37696958 GO_REF:0000024 NCBI chr12:41,312,365...41,316,157
Ensembl chr12:41,312,367...41,314,741
JBrowse link
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in ISS
IBA
IEA
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
UniProt
GO_Central
TreeGrafter
Ensembl
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20328
    metabolic process 11732
      organic substance metabolic process 11224
        macromolecule metabolic process 9474
          nucleic acid metabolic process 5123
            DNA metabolic process 985
              DNA strand resection involved in replication fork processing 7
                negative regulation of DNA strand resection involved in replication fork processing 1
                positive regulation of DNA strand resection involved in replication fork processing 0
                regulation of DNA strand resection involved in replication fork processing + 2
Path 2
Term Annotations click to browse term
  biological_process 20328
    cellular process 18788
      cellular metabolic process 10286
        cellular nitrogen compound metabolic process 6742
          nucleobase-containing compound metabolic process 5720
            nucleic acid metabolic process 5123
              DNA metabolic process 985
                DNA replication 273
                  DNA-templated DNA replication 157
                    DNA-templated DNA replication maintenance of fidelity 58
                      replication fork processing 52
                        DNA strand resection involved in replication fork processing 7
                          negative regulation of DNA strand resection involved in replication fork processing 1
                          positive regulation of DNA strand resection involved in replication fork processing 0
                          regulation of DNA strand resection involved in replication fork processing + 2
paths to the root