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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA strand resection involved in replication fork processing
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Accession:GO:0110025 term browser browse the term
Definition:The 5' to 3' exonucleolytic resection of DNA at the site of a stalled replication fork that contributes to replication fork processing.


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DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exo1 exonuclease 1 involved_in ISO (PMID:26240375) RGD PMID:26240375 NCBI chr13:87,809,725...87,834,654
Ensembl chr13:87,809,810...87,834,654 		JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:18854157)
(PMID:27814491), (PMID:27889449), (PMID:29670289), (PMID:30464262), (PMID:30612738), (PMID:30787182), (PMID:37696958)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:18854157 PMID:27814491 PMID:27889449 PMID:29670289 PMID:30464262 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 8:11,618,876...11,680,451
Ensembl chr 8:11,632,354...11,678,279 		JBrowse link
G Nbn nibrin involved_in IEA
ISO		 GO_REF:0000107
(PMID:27814491), (PMID:27889449), (PMID:30787182)		 Ensembl
RGD		 PMID:27814491 PMID:27889449 PMID:30787182 GO_REF:0000107 NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150 		JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:27889449)		 Ensembl
RGD		 PMID:27889449 GO_REF:0000107 NCBI chr10:37,809,353...37,861,309
Ensembl chr10:37,808,726...37,861,396 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO (PMID:23273981), (PMID:27814491), (PMID:27889449), (PMID:30787182) RGD PMID:23273981 PMID:27814491 PMID:27889449 PMID:30787182 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:28834754), (PMID:29670289) RGD PMID:28834754 PMID:29670289 NCBI chr 3:145,761,549...145,794,420
Ensembl chr 3:145,761,558...145,794,386 		JBrowse link
negative regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynll1 dynein light chain LC8-type 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:30464262), (PMID:37696958)		 UniProt
RGD		 PMID:30464262 PMID:37696958 GO_REF:0000024 NCBI chr12:41,312,365...41,316,157
Ensembl chr12:41,312,367...41,314,741 		JBrowse link
regulation of DNA strand resection involved in replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp365 zinc finger protein 365 involved_in ISS
IEA
IBA		 GO_REF:0000024
GO_REF:0000107
GO_REF:0000033		 UniProt
Ensembl
GO_Central		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20076
    cellular process 19155
      metabolic process 11953
        macromolecule metabolic process 9812
          nucleic acid metabolic process 5186
            DNA metabolic process 967
              DNA strand resection involved in replication fork processing 8
                negative regulation of DNA strand resection involved in replication fork processing 1
                positive regulation of DNA strand resection involved in replication fork processing 0
                regulation of DNA strand resection involved in replication fork processing + 2
Path 2
Term Annotations click to browse term
  biological_process 20076
    cellular process 19155
      metabolic process 11953
        primary metabolic process 10582
          nucleobase-containing compound metabolic process 5795
            nucleic acid metabolic process 5186
              DNA metabolic process 967
                DNA replication 271
                  DNA-templated DNA replication 160
                    DNA-templated DNA replication maintenance of fidelity 56
                      replication fork processing 50
                        DNA strand resection involved in replication fork processing 8
                          negative regulation of DNA strand resection involved in replication fork processing 1
                          positive regulation of DNA strand resection involved in replication fork processing 0
                          regulation of DNA strand resection involved in replication fork processing + 2
paths to the root