protein-DNA covalent cross-linking repair - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS	{{ watchLinkText }}

Term:	protein-DNA covalent cross-linking repair	go back to main search page
Accession:	GO:0106300	browse the term
Definition:	The removal of covalent cross-link between DNA and a protein.
Synonyms:	exact_synonym:	resolution of protein-DNA covalent cross-linking

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Rat (5) Mouse (6) Human (7) Chinchilla (6) Bonobo (6) Dog (6) Squirrel (6) Pig (6) Green Monkey (6) Naked Mole-rat (6) All
Genes (5)

protein-DNA covalent cross-linking repair

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fam111a

FAM111 trypsin like peptidase A

involved_in

ISO

(PMID:32165630)

RGD

PMID:32165630

NCBI chr 1:209,640,865...209,656,551
Ensembl chr 1:209,640,953...209,656,547

Sprtn

SprT-like N-terminal domain

involved_in

ISO
ISS
IEA

(PMID:27852435), (PMID:27871365), (PMID:27871366), (PMID:32152270), (PMID:32649882)
GO_REF:0000024
(MGI:5922101|PMID:28199696)
GO_REF:0000107

RGD
UniProt
Ensembl

PMID:27852435 PMID:27871365 PMID:27871366 PMID:28199696 PMID:32152270 More...

GO_REF:0000024 GO_REF:0000107 MGI:5922101

NCBI chr19:52,857,612...52,864,864
Ensembl chr19:52,857,866...52,864,864

Tex264

testis expressed 264

involved_in

ISO
IBA

(PMID:32152270)
PMID:21873635

RGD

PMID:32152270 PMID:21873635

RGD:13792537

NCBI chr 8:107,295,806...107,322,858
Ensembl chr 8:107,295,806...107,323,232

Vcp

valosin-containing protein

involved_in

ISO
ISS

(PMID:32152270)
GO_REF:0000024

RGD
UniProt

PMID:32152270

GO_REF:0000024

NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571

Vcpip1

valosin containing protein interacting protein 1

involved_in

ISO
ISS

(PMID:32649882)
GO_REF:0000024

RGD
UniProt

PMID:32649882

GO_REF:0000024

NCBI chr 5:9,534,247...9,560,889
Ensembl chr 5:9,534,129...9,562,040

Term paths to the root

Path 1
Term	Annotations
biological_process	19553
cellular process	18233
cellular response to stimulus	8778
cellular response to stress	2097
DNA damage response	830
DNA repair	525
protein-DNA covalent cross-linking repair	5
Path 2
Term	Annotations
biological_process	19553
metabolic process	11538
cellular metabolic process	10124
cellular aromatic compound metabolic process	5773
nucleobase-containing compound metabolic process	5539
nucleic acid metabolic process	4966
DNA metabolic process	993
DNA repair	525
protein-DNA covalent cross-linking repair	5

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InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
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Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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ONTOLOGY REPORT - ANNOTATIONS