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ONTOLOGY REPORT - ANNOTATIONS

Term:tRNA pseudouridine synthase activity
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Accession:GO:0106029 term browser browse the term
Definition:Catalysis of the reaction: tRNA uridine = tRNA pseudouridine. Conversion of uridine in a tRNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.
Synonyms:narrow_synonym: tRNA-uridine isomerase activity;   tRNA-uridine uracilmutase activity;   transfer RNA pseudouridine synthetase activity;   transfer ribonucleate pseudouridine synthetase activity
 xref: RHEA:54572


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tRNA pseudouridine synthase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pus1 pseudouridine synthase 1 enables ISO (MGI:1928672|PMID:10094309) RGD PMID:10094309 MGI:1928672 NCBI chr12:45,880,364...45,889,196
Ensembl chr12:45,880,440...45,889,196 		JBrowse link
G Pus10 pseudouridine synthase 10 enables ISO (PMID:30530625), (PMID:31819270) RGD PMID:30530625 PMID:31819270 NCBI chr14:97,621,228...97,684,059
Ensembl chr14:97,621,391...97,684,046 		JBrowse link
G Pusl1 pseudouridine synthase like 1 enables IEA GO_REF:0000003 UniProt GO_REF:0000003 NCBI chr 5:166,497,643...166,500,647
Ensembl chr 5:166,496,755...166,500,611 		JBrowse link
G Rpusd4 RNA pseudouridine synthase D4 enables IEA GO_REF:0000116 RHEA GO_REF:0000116 NCBI chr 8:33,617,384...33,626,873
Ensembl chr 8:33,617,379...33,626,873 		JBrowse link
G Trub1 TruB pseudouridine synthase family member 1 enables IEA GO_REF:0000116 RHEA GO_REF:0000116 NCBI chr 1:256,513,418...256,554,549
Ensembl chr 1:256,515,562...256,552,814 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20890
    catalytic activity 6118
      catalytic activity, acting on a nucleic acid 638
        catalytic activity, acting on RNA 399
          catalytic activity, acting on a tRNA 134
            tRNA pseudouridine synthase activity 5
              mitochondrial tRNA pseudouridine(27/28) synthase activity 0
              tRNA pseudouridine(13) synthase activity 0
              tRNA pseudouridine(31) synthase activity 0
              tRNA pseudouridine(32) synthase activity 0
              tRNA pseudouridine(38-40) synthase activity 0
              tRNA pseudouridine(38/39) synthase activity 0
              tRNA pseudouridine(55) synthase activity 0
              tRNA pseudouridine(65) synthase activity 0
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