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ONTOLOGY REPORT - ANNOTATIONS


Term:cell cortex region
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Accession:GO:0099738 term browser browse the term
Definition:The complete extent of cell cortex that underlies some some region of the plasma membrane.
Synonyms:exact_synonym: perimembrane region



show annotations for term's descendants           Sort by:
 
apical cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fabp1 fatty acid binding protein 1 IDA intestinal epithelial cells of fasted rats RGD PMID:10666570 RGD:1582399 NCBI chr 4:103,191,015...103,194,791
Ensembl chr 4:103,191,006...103,194,788
JBrowse link
G Fabp2 fatty acid binding protein 2 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:211,040,032...211,044,089
JBrowse link
G Hamp hepcidin antimicrobial peptide IDA RGD PMID:15684344 RGD:1599359 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Insc INSC, spindle orientation adaptor protein is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:168,993,032...169,100,438
Ensembl chr 1:168,993,032...169,100,433
JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member located_in ISO (MGI:3771666|PMID:18057100) RGD PMID:18057100 MGI:3771666 NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248
JBrowse link
G Myo5b myosin Vb located_in ISO
IEA
ISS
(PMID:21206382)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21206382 GO_REF:0000024 GO_REF:0000107 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 located_in ISO (MGI:3771666|PMID:18057100) RGD PMID:18057100 MGI:3771666 NCBI chr 1:67,778,037...67,810,946
Ensembl chr 1:67,777,948...68,023,736
JBrowse link
G Prkcz protein kinase C, zeta located_in ISO (MGI:3582101|PMID:15950600) RGD PMID:15950600 MGI:3582101 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Sapcd2 suppressor APC domain containing 2 located_in ISO (PMID:26766442)
(MGI:5882149|PMID:26766442)
RGD PMID:26766442 MGI:5882149 NCBI chr 3:8,186,089...8,195,119
Ensembl chr 3:8,187,266...8,192,546
JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 located_in ISO (MGI:3821785|PMID:18796539) RGD PMID:18796539 MGI:3821785 NCBI chr 3:107,013,783...107,054,878
Ensembl chr 3:107,013,265...107,054,324
JBrowse link
G Tchp trichoplein, keratin filament binding located_in ISO (PMID:15731013) RGD PMID:15731013 NCBI chr12:41,877,888...41,893,264
Ensembl chr12:41,877,889...41,892,427
JBrowse link
basal cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 located_in
is_active_in
ISO
IBA
(PMID:23940118)
PMID:21873635
RGD PMID:23940118 PMID:21873635 RGD:13792537 NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 located_in
is_active_in
ISO
IBA
(PMID:23940118)
PMID:21873635
RGD PMID:23940118 PMID:21873635 RGD:13792537 NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
JBrowse link
G Gck glucokinase IDA preferentially localized in regions closest to blood vessels in pancreatic beta cells of fed, not fasted, rats RGD PMID:10071239 RGD:2301948 NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995
JBrowse link
G Mark2 microtubule affinity regulating kinase 2 located_in ISO (MGI:3582101|PMID:15950600) RGD PMID:15950600 MGI:3582101 NCBI chr 1:204,461,029...204,526,247
Ensembl chr 1:204,461,030...204,525,652
JBrowse link
G Phldb1 pleckstrin homology-like domain, family B, member 1 located_in
is_active_in
ISO
IBA
(PMID:23940118)
PMID:21873635
RGD PMID:23940118 PMID:21873635 RGD:13792537 NCBI chr 8:45,003,538...45,051,541
Ensembl chr 8:45,003,538...45,051,522
JBrowse link
G Phldb2 pleckstrin homology-like domain, family B, member 2 located_in
is_active_in
ISO
IBA
(PMID:23940118)
PMID:21873635
RGD PMID:23940118 PMID:21873635 RGD:13792537 NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:10770959)
(MGI:4942265|PMID:10770959)
RGD PMID:10770959 MGI:4942265 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) is_active_in
located_in
IDA
IBA
PMID:21873635
PMID:9679147
RGD
GO_Central
SynGO-UCL
PMID:11596050 PMID:21873635 PMID:9679147 RGD:9850129, RGD:13792537, RGD:69780 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11596050 PMID:21873635 RGD:9850129, RGD:13792537 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
JBrowse link
lateral cell cortex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpsm2 G-protein signaling modulator 2 located_in ISO (PMID:26766442)
(MGI:5882149|PMID:26766442)
RGD PMID:26766442 MGI:5882149 NCBI chr 2:196,327,149...196,375,322
Ensembl chr 2:196,327,149...196,375,154
JBrowse link
G Numa1 nuclear mitotic apparatus protein 1 located_in ISO (MGI:5882149|PMID:26766442) RGD PMID:26766442 MGI:5882149 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
JBrowse link
postsynaptic endocytic zone cytoplasmic component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clta clathrin, light chain A located_in
is_active_in
ISO
IBA
(MGI:5819350|PMID:17880892)
PMID:21873635
RGD PMID:17880892 PMID:21873635 MGI:5819350, RGD:13792537 NCBI chr 5:58,244,253...58,263,480
Ensembl chr 5:58,245,442...58,263,472
JBrowse link
G Cltb clathrin, light chain B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
presynaptic active zone cytoplasmic component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) located_in
is_active_in
IEA
IDA
ISO
GO_REF:0000107
PMID:9679147
PMID:10340516
(MGI:5816444|PMID:21144999)
Ensembl
RGD
PMID:21144999 PMID:9679147 PMID:10340516 GO_REF:0000107 MGI:5816444, RGD:69780, RGD:13702152 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Ctbp1 C-terminal binding protein 1 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:6189269|PMID:22745816)
Ensembl
RGD
PMID:22745816 GO_REF:0000107 MGI:6189269 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Ctbp2 C-terminal binding protein 2 is_active_in ISO (MGI:6189269|PMID:22745816)
(MGI:3577130|PMID:15728193), (MGI:6189269|PMID:22745816)
RGD PMID:15728193 PMID:22745816 MGI:3577130 MGI:6189269 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222
JBrowse link
G Ctnna2 catenin alpha 2 is_active_in ISO (MGI:83903|PMID:8909549) RGD PMID:8909549 MGI:83903 NCBI chr 4:109,293,978...110,443,413
Ensembl chr 4:109,293,978...110,443,522
JBrowse link
G Ctnnb1 catenin beta 1 is_active_in
located_in
ISO
IEA
(MGI:83903|PMID:8909549)
GO_REF:0000107
RGD
Ensembl
PMID:8909549 GO_REF:0000107 MGI:83903 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ctnnd1 catenin delta 1 is_active_in IDA PMID:12727444 SynGO PMID:12727444 RGD:2316208 NCBI chr 3:69,683,328...69,734,550
Ensembl chr 3:69,683,313...69,734,516
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in IDA PMID:12391317 SynGO PMID:12391317 RGD:632516 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in IDA
ISO
PMID:12391317
(MGI:6120581|PMID:29439199)
RGD PMID:29439199 PMID:12391317 MGI:6120581, RGD:632516 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776
JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 is_active_in IDA PMID:12388603 SynGO PMID:12388603 RGD:12050093 NCBI chr 2:167,348,824...167,398,983
Ensembl chr 2:167,348,825...167,398,916
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 is_active_in ISO (MGI:6189645|PMID:19811534) RGD PMID:19811534 MGI:6189645 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 is_active_in IDA PMID:21179518 SynGO PMID:21179518 RGD:4892203 NCBI chr19:30,715,648...31,059,885
Ensembl chr19:30,715,648...31,059,885
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) located_in
is_active_in
ISO
IDA
IEA
(MGI:5816444|PMID:21144999)
PMID:31959215
GO_REF:0000107
PMID:21712437
RGD
Ensembl
PMID:21144999 PMID:31959215 PMID:21712437 GO_REF:0000107 MGI:5816444, RGD:155230771, RGD:9850098 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:6120581|PMID:29439199)
Ensembl
RGD
PMID:29439199 GO_REF:0000107 MGI:6120581 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798
JBrowse link
G Rimbp2 RIMS binding protein 2 is_active_in ISO (MGI:5822951|PMID:27671655) RGD PMID:27671655 MGI:5822951 NCBI chr12:27,747,615...27,946,256
Ensembl chr12:27,747,980...27,956,763
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in
located_in
IDA
ISO
PMID:9252191
(MGI:5816444|PMID:21144999)
(MGI:6189473|PMID:27537483)
PMID:27462810
RGD PMID:21144999 PMID:27537483 PMID:9252191 PMID:27462810 MGI:5816444 MGI:6189473, RGD:633897, RGD:13702367 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in IDA PMID:9252191 SynGO PMID:9252191 RGD:633897 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Stxbp1 syntaxin binding protein 1 is_active_in ISO (MGI:7316543|PMID:32494600) RGD PMID:32494600 MGI:7316543 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Unc13a unc-13 homolog A located_in
is_active_in
IDA
IBA
PMID:21712437
PMID:21873635
SynGO
GO_Central
PMID:21712437 PMID:21873635 RGD:9850098, RGD:13792537 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20520
    cellular anatomical entity 20277
      cell periphery 6825
        cell cortex 347
          cell cortex region 43
            anterior cell cortex 0
            apical cortex + 11
            basal cortex 7
            cell cortex of cell tip + 0
            cell leading edge cell cortex 0
            equatorial cell cortex 0
            lateral cell cortex + 2
            medial cortex + 0
            posterior cell cortex 0
            postsynaptic endocytic zone cytoplasmic component 2
            presynaptic active zone cytoplasmic component + 21
            presynaptic endocytic zone cytoplasmic component 0
Path 2
Term Annotations click to browse term
  cellular_component 20520
    cellular anatomical entity 20277
      intracellular anatomical structure 14775
        cytoplasm 11614
          cytoplasmic region 305
            cell cortex region 43
              anterior cell cortex 0
              apical cortex + 11
              basal cortex 7
              cell cortex of cell tip + 0
              cell leading edge cell cortex 0
              equatorial cell cortex 0
              lateral cell cortex + 2
              medial cortex + 0
              posterior cell cortex 0
              postsynaptic endocytic zone cytoplasmic component 2
              presynaptic active zone cytoplasmic component + 21
              presynaptic endocytic zone cytoplasmic component 0
paths to the root