Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:protein localization to axon
go back to main search page
Accession:GO:0099612 term browser browse the term
Definition:A process in which a protein is transported to or maintained in a location within an axon.


show annotations for term's descendants           Sort by:
 
protein localization to axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank3 ankyrin 3 involved_in
acts_upstream_of_or_within		 IMP
ISO		 PMID:25950943
(MGI:5708763|PMID:26671463)		 RGD PMID:26671463 PMID:25950943 MGI:5708763, RGD:13800538 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300 		JBrowse link
G Copa COPI coat complex subunit alpha acts_upstream_of_or_within ISO (MGI:4946576|PMID:21300694) RGD PMID:21300694 MGI:4946576 NCBI chr13:84,546,483...84,586,879
Ensembl chr13:84,545,943...84,586,874 		JBrowse link
G Cope COPI coat complex subunit epsilon acts_upstream_of_or_within ISO (MGI:4946576|PMID:21300694) RGD PMID:21300694 MGI:4946576 NCBI chr16:19,114,871...19,125,527
Ensembl chr16:19,114,871...19,128,907 		JBrowse link
G Trim46 tripartite motif-containing 46 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:5708763|PMID:26671463)
GO_REF:0000107		 RGD
Ensembl		 PMID:26671463 GO_REF:0000107 MGI:5708763 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141 		JBrowse link
establishment of protein localization to juxtaparanode region of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntn2 contactin 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:2675529|PMID:12975355)		 Ensembl
RGD		 PMID:12975355 GO_REF:0000107 MGI:2675529 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887 		JBrowse link
protein localization to juxtaparanode region of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntn2 contactin 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:2675531|PMID:12963709)
MGI:2181052|MGI:2677610|UniProtKB:P22063 (MGI:3821526|PMID:18760366), (MGI:3829295|PMID:19109503), (MGI:4837554|PMID:20962216)		 RGD PMID:12963709 PMID:18760366 PMID:19109503 PMID:20962216 MGI:2675531 MGI:3821526 MGI:3829295 MGI:4837554 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887 		JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5613863|PMID:25378149)		 UniProt
RGD		 PMID:25378149 GO_REF:0000024 MGI:5613863 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611 		JBrowse link
G Cntnap2 contactin associated protein 2 acts_upstream_of_or_within
involved_in		 ISO MGI:2677631 (MGI:3829295|PMID:19109503)
(MGI:2675531|PMID:12963709), (MGI:5613863|PMID:25378149)		 RGD PMID:12963709 PMID:19109503 PMID:25378149 MGI:2675531 MGI:3829295 MGI:5613863 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO MGI:5140703 (MGI:5013978|PMID:21632923), (MGI:5296417|PMID:21966409) RGD PMID:21632923 PMID:21966409 MGI:5013978 MGI:5296417 NCBI chr 9:109,056,178...109,260,607
Ensembl chr 9:109,016,113...109,260,607 		JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within ISO MGI:4837620 (MGI:4452171|PMID:20371806) RGD PMID:20371806 MGI:4452171 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880 		JBrowse link
protein localization to paranode region of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO		 GO_REF:0000024
MGI:3026869 (MGI:3621602|PMID:16551741), (MGI:3624505|PMID:16687515), (MGI:4838147|PMID:19816196)		 BHF-UCL
RGD		 PMID:16551741 PMID:16687515 PMID:19816196 GO_REF:0000024 MGI:3621602 MGI:3624505 MGI:4838147 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611 		JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO MGI:5140703 (MGI:5013978|PMID:21632923), (MGI:5296417|PMID:21966409) RGD PMID:21632923 PMID:21966409 MGI:5013978 MGI:5296417 NCBI chr 9:109,056,178...109,260,607
Ensembl chr 9:109,016,113...109,260,607 		JBrowse link
G Mal mal, T-cell differentiation protein involved_in ISO MGI:3053860 (MGI:3053254|PMID:15337780) RGD PMID:15337780 MGI:3053254 NCBI chr 3:114,864,378...114,888,136
Ensembl chr 3:114,864,378...114,888,136 		JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within ISO MGI:4837620 (MGI:4452171|PMID:20371806) RGD PMID:20371806 MGI:4452171 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO (MGI:3621602|PMID:16551741) RGD PMID:16551741 MGI:3621602 NCBI chr 2:214,264,483...214,332,769
Ensembl chr 2:214,264,483...214,332,660 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20099
    localization 5650
      macromolecule localization 3090
        cellular macromolecule localization 2614
          protein localization 2606
            protein localization to axon 11
              protein localization to juxtaparanode region of axon + 5
              protein localization to paranode region of axon 5
paths to the root