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ONTOLOGY REPORT - ANNOTATIONS

Term:presynaptic cytoskeleton
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Accession:GO:0099569 term browser browse the term
Definition:The portion of the cytoskeleton contained within the presynapse.


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presynaptic cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Septin3 septin 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:113,783,217...113,811,089
Ensembl chr 7:113,783,095...113,811,087 		JBrowse link
cytoskeleton of presynaptic active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) located_in
is_active_in		 IDA
IBA		 PMID:9679147
GO_REF:0000033		 GO_Central
RGD		 PMID:11596050 PMID:9679147 GO_REF:0000033, RGD:9850129, RGD:69780 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:152,763,664...153,055,724
Ensembl chr 4:152,767,419...153,055,639 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11596050 GO_REF:0000033, RGD:9850129 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:24,696,959...25,196,404
Ensembl chr 9:24,698,854...25,196,631 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491 		JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489 		JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 is_active_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:152,520,982...152,585,070
Ensembl chr 3:152,524,095...152,584,780 		JBrowse link
presynaptic actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 is_active_in IDA PMID:9875357 SynGO PMID:9875357 RGD:13702432 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232 		JBrowse link
G Actg1l1 actin, gamma 1 like 1 is_active_in IDA PMID:9875357 SynGO PMID:9875357 RGD:13702432 NCBI chr 3:72,977,767...72,979,691
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232 		JBrowse link
G Fam107a family with sequence similarity 107, member A is_active_in ISO (PMID:21969592) RGD PMID:21969592 NCBI chr15:16,608,362...16,630,398
Ensembl chr15:16,607,205...16,630,396 		JBrowse link
presynaptic intermediate filament cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nefl neurofilament light chain is_active_in ISO (PMID:25232125) RGD PMID:25232125 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793 		JBrowse link
G Nefm neurofilament medium chain is_active_in ISO (PMID:25869803) RGD PMID:25869803 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755 		JBrowse link
G Rad51 RAD51 recombinase is_active_in ISO (PMID:18003859) RGD PMID:18003859 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20815
    cellular anatomical entity 20578
      presynapse 895
        presynaptic cytoskeleton 15
          cytoskeleton of presynaptic active zone + 8
          presynaptic actin cytoskeleton 3
          presynaptic intermediate filament cytoskeleton 3
Path 2
Term Annotations click to browse term
  cellular_component 20815
    cellular anatomical entity 20578
      organelle 14002
        non-membrane-bounded organelle 5254
          intracellular non-membrane-bounded organelle 5254
            cytoskeleton 2367
              presynaptic cytoskeleton 15
                cytoskeleton of presynaptic active zone + 8
                presynaptic actin cytoskeleton 3
                presynaptic intermediate filament cytoskeleton 3
paths to the root