Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic membrane adhesion
go back to main search page
Accession:GO:0099560 term browser browse the term
Definition:The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.
Synonyms:exact_synonym: synapse adhesion between pre- and post-synapse


show annotations for term's descendants           Sort by:
synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADM1 cell adhesion molecule 1 involved_in ISO (PMID:18003830) SynGO PMID:18003830 NCBI chr11:115,169,236...115,504,415
Ensembl chr11:115,169,218...115,504,957 		JBrowse link
G CDH10 cadherin 10 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:24,487,100...24,644,978
Ensembl chr 5:24,487,100...24,644,978 		JBrowse link
G CDH6 cadherin 6 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:31,193,686...31,329,146
Ensembl chr 5:31,193,686...31,329,146 		JBrowse link
G CDH9 cadherin 9 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 5:26,880,597...27,038,586
Ensembl chr 5:26,880,597...27,121,150 		JBrowse link
G EFNA5 ephrin A5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:107,376,894...107,670,937
Ensembl chr 5:107,376,894...107,670,937 		JBrowse link
G ELFN1 extracellular leucine rich repeat and fibronectin type III domain containing 1 involved_in ISO (PMID:25047565) SynGO PMID:25047565 NCBI chr 7:1,666,064...1,747,946
Ensembl chr 7:1,665,745...1,747,946 		JBrowse link
G ELFN2 extracellular leucine rich repeat and fibronectin type III domain containing 2 involved_in ISO (PMID:31485013) SynGO PMID:31485013 NCBI chr22:37,340,644...37,427,479
Ensembl chr22:37,367,960...37,427,479
Ensembl chr22:37,367,960...37,427,479 		JBrowse link
G EPHA3 EPH receptor A3 involved_in ISO (PMID:22275477) SynGO PMID:22275477 NCBI chr 3:89,107,621...89,482,134
Ensembl chr 3:89,107,621...89,482,134 		JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:14,322,985...14,337,612
Ensembl chr20:14,322,985...14,337,614 		JBrowse link
G GPC4 glypican 4 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:133,300,103...133,415,489
Ensembl chr  X:133,300,103...133,415,489 		JBrowse link
G IGSF9B immunoglobulin superfamily member 9B involved_in ISO (PMID:23751499) SynGO PMID:23751499 NCBI chr11:133,896,438...133,956,968
Ensembl chr11:133,896,438...133,956,968 		JBrowse link
G IL1RAP interleukin 1 receptor accessory protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:190,514,085...190,659,750
Ensembl chr 3:190,514,051...190,659,750 		JBrowse link
G IL1RAPL1 interleukin 1 receptor accessory protein like 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr  X:28,587,446...29,956,718
Ensembl chr  X:28,587,446...29,956,718 		JBrowse link
G ITGA3 integrin subunit alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,056,110...50,090,481
Ensembl chr17:50,055,968...50,090,481 		JBrowse link
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:35,936,374...35,946,624
Ensembl chr19:35,935,358...35,946,624 		JBrowse link
G LRFN4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:66,857,064...66,860,475
Ensembl chr11:66,856,647...66,860,475 		JBrowse link
G LRFN5 leucine rich repeat and fibronectin type III domain containing 5 involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr14:41,606,876...41,904,549
Ensembl chr14:41,606,876...41,904,549 		JBrowse link
G LRRC4 leucine rich repeat containing 4 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:128,027,071...128,032,128
Ensembl chr 7:128,027,071...128,032,107 		JBrowse link
G LRRC4B leucine rich repeat containing 4B involved_in IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:50,516,892...50,568,435
Ensembl chr19:50,516,892...50,568,435 		JBrowse link
G LRRC4C leucine rich repeat containing 4C involved_in IGI
IEA
IBA		 (PMID:23986473) SynGO-UCL
Ensembl
TreeGrafter
GO_Central		 PMID:23986473 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr11:40,114,199...41,459,652
Ensembl chr11:40,114,203...41,459,773 		JBrowse link
G NLGN1 neuroligin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:173,395,952...174,294,372
Ensembl chr 3:173,396,284...174,294,372 		JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:10686589) SynGO PMID:10686589 NCBI chr 8:31,639,245...32,774,046
Ensembl chr 8:31,639,222...32,855,666 		JBrowse link
G NRXN1 neurexin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:49,918,503...51,032,132
Ensembl chr 2:49,918,503...51,225,575 		JBrowse link
G NTNG1 netrin G1 involved_in IGI
IEA		 (PMID:23986473) SynGO-UCL
Ensembl		 PMID:23986473 GO_REF:0000107 NCBI chr 1:107,140,088...107,484,923
Ensembl chr 1:107,140,007...107,484,923 		JBrowse link
G NTNG2 netrin G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:132,161,689...132,244,526
Ensembl chr 9:132,162,058...132,244,526 		JBrowse link
G PCDH17 protocadherin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:57,630,108...57,729,311
Ensembl chr13:57,631,744...57,729,311 		JBrowse link
G PTPRD protein tyrosine phosphatase receptor type D involved_in IMP
ISS
IBA
IDA		 (PMID:23345436) SynGO
BHF-UCL
GO_Central		 PMID:23345436 GO_REF:0000024 GO_REF:0000033 NCBI chr 9:8,314,246...10,613,002
Ensembl chr 9:8,314,246...10,613,002 		JBrowse link
G PTPRF protein tyrosine phosphatase receptor type F involved_in IDA
IBA
IMP		 (PMID:26321637) SynGO
GO_Central		 PMID:26321637 GO_REF:0000033 NCBI chr 1:43,522,051...43,623,666
Ensembl chr 1:43,525,187...43,623,666 		JBrowse link
G PTPRS protein tyrosine phosphatase receptor type S involved_in IDA
IBA
IMP		 (PMID:23345436) SynGO
GO_Central		 PMID:23345436 GO_REF:0000033 NCBI chr19:5,205,508...5,340,812
Ensembl chr19:5,158,495...5,340,812 		JBrowse link
G SLITRK1 SLIT and NTRK like family member 1 involved_in IDA
IMP		 (PMID:23345436) SynGO PMID:23345436 NCBI chr13:83,877,205...83,882,474
Ensembl chr13:83,877,205...83,882,474 		JBrowse link
G SLITRK2 SLIT and NTRK like family member 2 involved_in IDA
IMP		 (PMID:23345436) SynGO PMID:23345436 NCBI chr  X:145,817,829...145,829,856
Ensembl chr  X:145,817,829...145,829,856 		JBrowse link
G SLITRK3 SLIT and NTRK like family member 3 involved_in IMP
IDA		 (PMID:23345436) SynGO PMID:23345436 NCBI chr 3:165,186,720...165,197,109
Ensembl chr 3:165,186,720...165,197,109 		JBrowse link
G SLITRK5 SLIT and NTRK like family member 5 involved_in IMP
IDA		 (PMID:23345436) SynGO PMID:23345436 NCBI chr13:87,671,371...87,679,616
Ensembl chr13:87,671,371...87,696,272 		JBrowse link
G SPARCL1 SPARC like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:87,473,335...87,529,376
Ensembl chr 4:87,473,335...87,531,061 		JBrowse link
G TENM3 teneurin transmembrane protein 3 involved_in ISO (PMID:35484136) SynGO PMID:35484136 NCBI chr 4:181,447,613...182,803,024
Ensembl chr 4:182,143,987...182,803,024 		JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in ISO (PMID:35484136) SynGO PMID:35484136 NCBI chr11:78,652,829...79,441,030
Ensembl chr11:78,652,829...79,441,030 		JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRFN3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:35,936,374...35,946,624
Ensembl chr19:35,935,358...35,946,624 		JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO PMID:23751499 SynGO PMID:23751499 RGD:13702234 NCBI chr 7:78,017,055...79,453,667
Ensembl chr 7:78,017,055...79,453,667 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,027,808...36,124,214
Ensembl chr 6:36,027,782...36,111,236 		JBrowse link
G MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in IMP
IDA		 (PMID:28641112) SynGO PMID:28641112 NCBI chr 6:37,630,679...37,697,883
Ensembl chr 6:37,630,679...37,699,306 		JBrowse link
G MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (PMID:27608760) SynGO PMID:27608760 NCBI chr14:46,839,623...47,675,605
Ensembl chr14:46,840,092...47,675,605 		JBrowse link
G PCDH8 protocadherin 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:52,842,889...52,848,640
Ensembl chr13:52,842,889...52,848,641 		JBrowse link
G TAOK2 TAO kinase 2 involved_in ISO PMID:17988630 SynGO PMID:17988630 RGD:13702360 NCBI chr16:29,973,868...29,992,261
Ensembl chr16:29,973,868...29,992,261 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    cellular process 18300
      cell adhesion 1667
        cell-cell adhesion 1077
          cell-cell adhesion via plasma-membrane adhesion molecules 307
            synaptic membrane adhesion 42
              regulation of synaptic membrane adhesion 7
Path 2
Term Annotations click to browse term
  biological_process 19669
    cellular process 18300
      cellular component organization or biogenesis 7533
        cellular component organization 7308
          cell junction organization 975
            synapse organization 684
              synaptic membrane adhesion 42
                regulation of synaptic membrane adhesion 7
paths to the root