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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic membrane adhesion
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Accession:GO:0099560 term browser browse the term
Definition:The attachment of presynaptic membrane to postsynaptic membrane via adhesion molecules that are at least partially embedded in the plasma membrane.
Synonyms:exact_synonym: synapse adhesion between pre- and post-synapse



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synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (MGI:6189417|PMID:18003830) RGD PMID:18003830 MGI:6189417 NCBI chr 8:47,847,836...48,178,703
Ensembl chr 8:47,847,325...48,182,833
JBrowse link
G Cdh2 cadherin 2 involved_in IC PMID:11086998 SynGO PMID:11086998 RGD:12050097 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Cdh9 cadherin 9 involved_in IMP
ISO
PMID:21867881
(MGI:5914212|PMID:21867881)
RGD PMID:21867881 PMID:21867881 MGI:5914212, RGD:13432233 NCBI chr 2:66,280,422...66,367,121
Ensembl chr 2:66,228,117...66,367,121
JBrowse link
G Efna5 ephrin A5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5532478|PMID:22275477)
Ensembl
RGD
PMID:22275477 GO_REF:0000107 MGI:5532478 NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
JBrowse link
G Epha3 Eph receptor A3 involved_in ISO (MGI:5532478|PMID:22275477) RGD PMID:22275477 MGI:5532478 NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5688833|PMID:22405201)
Ensembl
RGD
PMID:22405201 GO_REF:0000107 MGI:5688833 NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
JBrowse link
G Gpc4 glypican 4 involved_in IBA
ISO
PMID:21873635
(MGI:5515243|PMID:23911103)
RGD PMID:23911103 PMID:21873635 MGI:5515243, RGD:13792537 NCBI chr  X:131,644,711...131,755,349
Ensembl chr  X:131,644,704...131,755,284
JBrowse link
G Gpc6 glypican 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:94,030,218...95,027,883
Ensembl chr15:94,029,884...95,024,006
JBrowse link
G Igsf9b immunoglobulin superfamily, member 9B involved_in ISO (MGI:5514300|PMID:23751499) RGD PMID:23751499 MGI:5514300 NCBI chr 8:25,712,644...25,769,481
Ensembl chr 8:25,712,644...25,758,554
JBrowse link
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IDA
IMP
PMID:18227064 SynGO PMID:18227064 PMID:18227064 RGD:13702403, RGD:13702403 NCBI chr 1:85,616,862...85,623,725
Ensembl chr 1:85,616,868...85,623,725
JBrowse link
G Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 involved_in IBA
ISO
PMID:21873635
(MGI:4836132|PMID:20410109)
RGD PMID:20410109 PMID:21873635 MGI:4836132, RGD:13792537 NCBI chr 1:201,888,569...201,891,861
Ensembl chr 1:201,888,569...201,891,861
JBrowse link
G Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 involved_in EXP
IBA
IMP
IDA
PMID:27225731
PMID:21873635
SynGO
GO_Central
PMID:27225731 PMID:21873635 PMID:27225731 PMID:27225731 RGD:13702436, RGD:13792537, RGD:13702436, RGD:13702436 NCBI chr 6:79,466,403...79,822,821
Ensembl chr 6:79,467,961...79,822,815
JBrowse link
G Lrrc4 leucine rich repeat containing 4 involved_in IDA
IBA
IMP
PMID:16980967
PMID:21873635
SynGO
GO_Central
PMID:16980967 PMID:21873635 PMID:16980967 RGD:13702267, RGD:13792537, RGD:13702267 NCBI chr 4:57,433,518...57,437,114
Ensembl chr 4:57,433,428...57,437,911
JBrowse link
G Lrrc4b leucine rich repeat containing 4B involved_in IMP
IBA
IDA
PMID:19252495
PMID:21873635
SynGO
GO_Central
PMID:19252495 PMID:21873635 PMID:19252495 RGD:13702321, RGD:13792537, RGD:13702321 NCBI chr 1:94,922,034...94,956,309
Ensembl chr 1:94,935,603...94,956,263
JBrowse link
G Lrrc4c leucine rich repeat containing 4C involved_in ISO
IBA
UniProtKB:Q9Y2I2 (PMID:23986473)
PMID:21873635
(MGI:5616976|PMID:25411505)
RGD PMID:23986473 PMID:25411505 PMID:21873635 MGI:5616976, RGD:13792537 NCBI chr 3:82,305,244...83,684,039
Ensembl chr 3:83,483,851...83,687,774
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785), (MGI:5763518|PMID:26771491) RGD PMID:12796785 PMID:26771491 MGI:2665153 MGI:5763518 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:10686589) RGD PMID:10686589 NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785), (MGI:5763518|PMID:26771491) RGD PMID:12796785 PMID:26771491 MGI:2665153 MGI:5763518 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ntng1 netrin G1 involved_in ISO UniProtKB:Q9HCJ2 (PMID:23986473)
(MGI:5616976|PMID:25411505)
RGD PMID:23986473 PMID:25411505 MGI:5616976 NCBI chr 2:197,462,785...197,827,681
Ensembl chr 2:197,463,945...197,826,997
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:3664681|PMID:16980967) RGD PMID:16980967 MGI:3664681 NCBI chr 3:12,492,574...12,551,104
Ensembl chr 3:12,492,639...12,545,890
JBrowse link
G Pcdh17 protocadherin 17 involved_in ISO (MGI:5514320|PMID:23684785) RGD PMID:23684785 MGI:5514320 NCBI chr15:60,222,088...60,316,172
Ensembl chr15:60,222,004...60,313,999
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in IMP
IDA
ISO
IBA
PMID:20139422
PMID:27225731
(PMID:23345436)
PMID:21873635
RGD PMID:23345436 PMID:20139422 PMID:27225731 PMID:20139422 PMID:27225731 More... RGD:13702345, RGD:13702436, RGD:13702345, RGD:13702436, RGD:13792537 NCBI chr 5:90,046,993...90,698,977
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
G Ptprf protein tyrosine phosphatase, receptor type, F involved_in IDA
IMP
IEA
ISO
IBA
PMID:27225731
PMID:20139422
GO_REF:0000107
(PMID:26321637)
PMID:21873635
Ensembl
RGD
PMID:26321637 PMID:27225731 PMID:27225731 PMID:20139422 PMID:21873635 More... GO_REF:0000107, RGD:13702436, RGD:13702436, RGD:13702345, RGD:13792537, RGD:13702345 NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
JBrowse link
G Ptprs protein tyrosine phosphatase, receptor type, S involved_in IDA
IMP
ISO
IBA
IEA
PMID:20139422
PMID:27225731
(PMID:23345436)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:23345436 PMID:20139422 PMID:20139422 PMID:27225731 PMID:27225731 More... GO_REF:0000107, RGD:13702345, RGD:13702345, RGD:13702436, RGD:13702436, RGD:13792537 NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
JBrowse link
G Slitrk1 SLIT and NTRK-like family, member 1 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
JBrowse link
G Slitrk2 SLIT and NTRK-like family, member 2 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr  X:145,246,448...145,259,983
Ensembl chr  X:145,246,460...145,271,220
JBrowse link
G Slitrk3 SLIT and NTRK-like family, member 3 involved_in ISO (PMID:23345436) RGD PMID:23345436 NCBI chr 2:157,680,067...157,697,404
Ensembl chr 2:157,687,535...157,696,709
JBrowse link
G Sparcl1 SPARC like 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5763518|PMID:26771491)
Ensembl
RGD
PMID:26771491 GO_REF:0000107 MGI:5763518 NCBI chr14:5,632,816...5,663,866
Ensembl chr14:5,632,569...5,663,865
JBrowse link
regulation of synaptic membrane adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 involved_in IDA
IMP
PMID:27480238 SynGO PMID:27480238 PMID:27480238 RGD:13702184, RGD:13702184 NCBI chr 1:85,616,862...85,623,725
Ensembl chr 1:85,616,868...85,623,725
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in IMP
IDA
PMID:23751499 SynGO PMID:23751499 PMID:23751499 RGD:13702234, RGD:13702234 NCBI chr 4:14,388,322...15,870,036
Ensembl chr 4:14,386,399...15,870,240
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
GO_REF:0000107
(MGI:6189514|PMID:17988630)
Ensembl
RGD
PMID:17988630 GO_REF:0000107 MGI:6189514 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 involved_in ISO
IEA
(PMID:28641112)
GO_REF:0000107
RGD
Ensembl
PMID:28641112 GO_REF:0000107 NCBI chr20:7,900,327...7,963,471
Ensembl chr20:7,904,358...7,963,471
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 involved_in ISO (MGI:6109768|PMID:27608760) RGD PMID:27608760 MGI:6109768 NCBI chr 6:84,746,422...85,608,640
Ensembl chr 6:84,761,941...85,608,126
JBrowse link
G Pcdh8 protocadherin 8 involved_in IDA
IMP
PMID:17988630 SynGO PMID:17988630 PMID:17988630 RGD:13702360, RGD:13702360 NCBI chr15:55,198,475...55,203,021
Ensembl chr15:55,198,459...55,205,872
JBrowse link
G Taok2 TAO kinase 2 involved_in IDA
IMP
PMID:17988630 SynGO PMID:17988630 PMID:17988630 RGD:13702360, RGD:13702360 NCBI chr 1:181,475,708...181,494,738
Ensembl chr 1:181,475,711...181,494,613
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19541
    cellular process 18407
      cell adhesion 1423
        cell-cell adhesion 892
          cell-cell adhesion via plasma-membrane adhesion molecules 256
            synaptic membrane adhesion 35
              regulation of synaptic membrane adhesion 7
Path 2
Term Annotations click to browse term
  biological_process 19541
    cellular process 18407
      cellular component organization or biogenesis 6664
        cellular component organization 6422
          cell junction organization 808
            synapse organization 517
              synaptic membrane adhesion 35
                regulation of synaptic membrane adhesion 7
paths to the root