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ONTOLOGY REPORT - ANNOTATIONS


Term:trans-synaptic signaling by trans-synaptic complex
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Accession:GO:0099545 term browser browse the term
Definition:Cell-cell signaling between presynapse and postsynapse mediated by a trans-synaptic protein complex.



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trans-synaptic signaling by trans-synaptic complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1rap interleukin 1 receptor accessory protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5315316|PMID:22357843)
Ensembl
RGD
PMID:22357843 GO_REF:0000107 MGI:5315316 NCBI chr11:74,062,999...74,199,530
Ensembl chr11:74,070,304...74,199,530
JBrowse link
G Il1rapl1 interleukin 1 receptor accessory protein-like 1 involved_in ISO
IEA
(PMID:21926414)
GO_REF:0000107
RGD
Ensembl
PMID:21926414 GO_REF:0000107 NCBI chr  X:51,371,969...52,876,726
Ensembl chr  X:51,378,215...52,876,772
JBrowse link
G Ptprd protein tyrosine phosphatase, receptor type, D involved_in ISO (PMID:21926414) RGD PMID:21926414 NCBI chr 5:90,046,993...90,698,977
Ensembl chr 5:90,048,966...92,369,396
JBrowse link
retrograde trans-synaptic signaling by trans-synaptic protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in ISO (MGI:5476896|PMID:23209303) RGD PMID:23209303 MGI:5476896 NCBI chr 8:47,847,836...48,178,703
Ensembl chr 8:47,847,325...48,182,833
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (MGI:5804030|PMID:27707967) RGD PMID:27707967 MGI:5804030 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 involved_in IMP
IDA
PMID:23209303 SynGO PMID:23209303 PMID:23209303 RGD:8554251, RGD:8554251 NCBI chr15:98,124,304...98,363,299
Ensembl chr15:98,182,329...98,363,299
JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP PMID:17237775 SynGO PMID:17237775 RGD:12050104 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Tenm2 teneurin transmembrane protein 2 involved_in ISO (PMID:21724987) RGD PMID:21724987 NCBI chr10:20,480,662...21,706,415
Ensembl chr10:20,481,854...21,705,597
JBrowse link
trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb3 ephrin B3 involved_in ISO (MGI:3620453|PMID:16571754) RGD PMID:16571754 MGI:3620453 NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
JBrowse link
G Ephb2 Eph receptor B2 involved_in ISO (MGI:5819355|PMID:12052960) RGD PMID:12052960 MGI:5819355 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Nptn neuroplastin involved_in IDA PMID:10759566 SynGO PMID:10759566 RGD:8553916 NCBI chr 8:58,996,876...59,063,402
Ensembl chr 8:58,996,887...59,063,401
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18737
    signaling 7370
      cell-cell signaling 1766
        synaptic signaling 924
          trans-synaptic signaling 897
            trans-synaptic signaling by trans-synaptic complex 11
              anterograde trans-synaptic signaling by trans-synaptic protein complex 0
              retrograde trans-synaptic signaling by trans-synaptic protein complex + 5
              trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission 3
Path 2
Term Annotations click to browse term
  biological_process 18737
    cellular process 17432
      cell communication 7465
        cell-cell signaling 1766
          synaptic signaling 924
            trans-synaptic signaling 897
              trans-synaptic signaling by trans-synaptic complex 11
                anterograde trans-synaptic signaling by trans-synaptic protein complex 0
                retrograde trans-synaptic signaling by trans-synaptic protein complex + 5
                trans-synaptic signaling by trans-synaptic complex, modulating synaptic transmission 3
paths to the root