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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle endosomal processing
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Accession:GO:0099532 term browser browse the term
Definition:The process in which synaptic vesicles fuse to the presynaptic endosome followed by sorting of synaptic vesicle components and budding of new synaptic vesicles.
Comment:This covers processing of synaptic vesicles trafficked to synapse as well as of endocytosed vesicles as part of recycling. It is there for not part of the synaptic vesicle cycle.
Synonyms:exact_synonym: synaptic vesicle processing via endosome



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clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itsn1 intersectin 1 (SH3 domain protein 1A) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr16:91,526,198...91,717,479
Ensembl chr16:91,526,169...91,717,485
JBrowse link
G Itsn2 intersectin 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr12:4,642,792...4,763,952
Ensembl chr12:4,642,638...4,763,962
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 NCBI chr  X:7,656,009...7,686,805
Ensembl chr  X:7,656,004...7,686,806
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor protein complex AP-1, gamma 1 subunit involved_in ISO PMID:22539861 SynGO PMID:22539861 RGD:12050120 NCBI chr 8:110,505,215...110,590,842
Ensembl chr 8:110,505,186...110,590,836
JBrowse link
G Ap1s2 adaptor-related protein complex 1, sigma 2 subunit involved_in IDA
IMP
(MGI:5617942|PMID:20203623) SynGO PMID:20203623 MGI:5617942 NCBI chr  X:162,691,427...162,716,662
Ensembl chr  X:162,692,013...162,716,662
JBrowse link
G Ap3d1 adaptor-related protein complex 3, delta 1 subunit involved_in ISO
IBA
IMP
IDA
(MGI:6201960|PMID:21873635)
(MGI:6189637|PMID:11588176)
MGI
GO_Central
SynGO
PMID:11588176 PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6189637 MGI:6201960 NCBI chr10:80,542,790...80,578,137
Ensembl chr10:80,542,790...80,578,098
JBrowse link
G Btbd8 BTB domain containing 8 involved_in IMP
IDA
(MGI:6104538|PMID:29262337) SynGO PMID:29262337 MGI:6104538 NCBI chr 5:107,585,796...107,660,426
Ensembl chr 5:107,585,863...107,659,073
JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2-like 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:152,600,652...152,673,632
Ensembl chr 2:152,622,588...152,673,648
JBrowse link
G Dnm1l dynamin 1-like involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr16:16,130,092...16,176,863
Ensembl chr16:16,130,094...16,176,823
JBrowse link
G Myo5b myosin VB involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:74,575,435...74,905,769
Ensembl chr18:74,574,007...74,904,564
JBrowse link
synaptic vesicle to endosome fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stx12 syntaxin 12 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:132,581,375...132,611,769
Ensembl chr 4:132,580,812...132,611,820
JBrowse link
G Stx6 syntaxin 6 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:155,034,374...155,083,405
Ensembl chr 1:155,034,461...155,084,002
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:162,398,084...162,426,651
Ensembl chr 1:162,398,084...162,426,653
JBrowse link
G Vti1a vesicle transport through interaction with t-SNAREs 1A involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr19:55,304,489...55,615,893
Ensembl chr19:55,304,727...55,615,741
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28558
    cellular process 17563
      vesicle-mediated transport 1607
        endosomal transport 287
          synaptic vesicle endosomal processing 14
            endocytosed synaptic vesicle processing via endosome 0
            synaptic vesicle recycling via endosome + 10
            synaptic vesicle to endosome fusion + 4
Path 2
Term Annotations click to browse term
  biological_process 28558
    localization 5517
      establishment of localization 4808
        establishment of localization in cell 2113
          intracellular transport 1371
            endosomal transport 287
              synaptic vesicle endosomal processing 14
                endocytosed synaptic vesicle processing via endosome 0
                synaptic vesicle recycling via endosome + 10
                synaptic vesicle to endosome fusion + 4
paths to the root