ONTOLOGY REPORT - ANNOTATIONS |
|
|
Term: | cytosolic region |
|
Accession: | GO:0099522
|
browse the term
|
Definition: | Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol. |
Synonyms: | exact_synonym: | region of cytosol |
|
|
|
G |
Aldoc |
aldolase, fructose-bisphosphate C |
is_active_in |
IDA |
PMID:9570792 |
SynGO |
PMID:9570792 |
RGD:13702209 |
NCBI chr10:63,217,477...63,221,066
Ensembl chr10:63,217,451...63,221,066
|
|
G |
Baiap2 |
BAR/IMD domain containing adaptor protein 2 |
is_active_in |
IDA |
PMID:15673667 |
SynGO |
PMID:15673667 |
RGD:9684988 |
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
|
|
G |
Calb1 |
calbindin 1 |
is_active_in |
IDA |
PMID:15355314 |
SynGO |
PMID:15355314 |
RGD:13702370 |
NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
|
|
G |
Camk2a |
calcium/calmodulin-dependent protein kinase II alpha |
located_in is_active_in |
IDA |
PMID:10102820 PMID:17957478 |
SynGO |
PMID:10102820 PMID:17957478 |
RGD:12050143, RGD:13702290 |
NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
|
|
G |
Dag1 |
dystroglycan 1 |
is_active_in |
IDA |
PMID:9446825 |
SynGO |
PMID:9446825 |
RGD:13702366 |
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
|
|
G |
Dbn1 |
drebrin 1 |
located_in is_active_in |
IEA ISO |
GO_REF:0000107 (MGI:6189372|PMID:17559090) |
Ensembl RGD |
PMID:17559090 |
GO_REF:0000107 MGI:6189372 |
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
|
|
G |
Eif4e |
eukaryotic translation initiation factor 4E |
is_active_in |
IDA |
PMID:11756682 |
SynGO |
PMID:11756682 |
RGD:13702327 |
NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
|
|
G |
Eif4ebp1 |
eukaryotic translation initiation factor 4E binding protein 1 |
is_active_in |
IDA |
PMID:11756682 |
SynGO |
PMID:11756682 |
RGD:13702327 |
NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984
|
|
G |
Fbxo45 |
F-box protein 45 |
is_active_in located_in |
ISO IEA |
(MGI:4452423|PMID:19996097) GO_REF:0000107 |
RGD Ensembl |
PMID:19996097 |
GO_REF:0000107 MGI:4452423 |
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
|
|
G |
Fmr1 |
fragile X messenger ribonucleoprotein 1 |
is_active_in |
IDA |
PMID:9144248 |
SynGO |
PMID:9144248 |
RGD:11059594 |
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
|
|
G |
Hap1 |
huntingtin-associated protein 1 |
is_active_in |
IDA |
PMID:9742138 |
SynGO |
PMID:9742138 |
RGD:13702459 |
NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
|
|
G |
Haus8l2 |
HAUS augmin-like complex, subunit 8 like 2 |
located_in |
IEA |
GO_REF:0000118 |
TreeGrafter |
|
GO_REF:0000118 |
NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
|
|
G |
Hnrnpa2b1 |
heterogeneous nuclear ribonucleoprotein A2/B1 |
is_active_in |
IDA IEP |
PMID:25286195 |
SynGO |
PMID:25286195 PMID:25286195 |
RGD:13702460, RGD:13702460 |
NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
|
|
G |
Homer1 |
homer scaffold protein 1 |
located_in is_active_in |
IEA ISO |
GO_REF:0000107 (MGI:5570507|PMID:24530450) |
Ensembl RGD |
PMID:24530450 |
GO_REF:0000107 MGI:5570507 |
NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
|
|
G |
Hsc70-ps1 |
heat shock cognate protein 70, pseudogene 1 |
located_in |
IEA |
GO_REF:0000118 |
TreeGrafter |
|
GO_REF:0000118 |
NCBI chr 2:164,044,226...164,046,344
Ensembl chr 2:164,044,261...164,046,336
|
|
G |
Hspa8 |
heat shock protein family A (Hsp70) member 8 |
located_in |
IDA IEA |
PMID:9878698 GO_REF:0000118 |
TreeGrafter |
PMID:9878698 |
GO_REF:0000118, RGD:10059325 |
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
|
|
G |
Hspa8-ps23 |
heat shock protein family A (Hsp70) member 8, pseudogene 23 |
located_in |
IEA |
GO_REF:0000118 |
TreeGrafter |
|
GO_REF:0000118 |
NCBI chr X:32,535,167...32,537,203
Ensembl chr X:32,535,155...32,537,257
|
|
G |
Htt |
huntingtin |
located_in is_active_in |
IEA ISO |
GO_REF:0000107 (PMID:7748555) |
Ensembl RGD |
PMID:7748555 |
GO_REF:0000107 |
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
|
|
G |
Kif5c |
kinesin family member 5C |
is_active_in |
IDA |
PMID:20152113 |
SynGO |
PMID:20152113 |
RGD:10047142 |
NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
|
|
G |
Mtor |
mechanistic target of rapamycin kinase |
is_active_in |
IDA |
PMID:11756682 |
SynGO |
PMID:11756682 |
RGD:13702327 |
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
|
|
G |
Ncs1 |
neuronal calcium sensor 1 |
is_active_in |
IDA |
PMID:11910115 |
SynGO |
PMID:11910115 |
RGD:13702284 |
NCBI chr 3:14,523,220...14,568,829
Ensembl chr 3:14,523,220...14,568,829
|
|
G |
Nedd4 |
NEDD4 E3 ubiquitin protein ligase |
is_active_in |
ISO |
(MGI:5763359|PMID:25505317) |
RGD |
PMID:25505317 |
MGI:5763359 |
NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
|
|
G |
Ogt |
O-linked N-acetylglucosamine (GlcNAc) transferase |
is_active_in |
IDA |
PMID:12618343 |
SynGO |
PMID:12618343 |
RGD:155230725 |
NCBI chr X:66,771,278...66,816,148
Ensembl chr X:66,771,349...66,816,146
|
|
G |
Pin1 |
peptidylprolyl cis/trans isomerase, NIMA-interacting 1 |
is_active_in |
ISO |
(PMID:28458925) |
RGD |
PMID:28458925 |
|
NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785
|
|
G |
Plcb1 |
phospholipase C beta 1 |
is_active_in located_in |
ISO IEA |
(MGI:3826278|PMID:18973591) GO_REF:0000107 |
RGD Ensembl |
PMID:18973591 |
GO_REF:0000107 MGI:3826278 |
NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869
|
|
G |
Plcb3 |
phospholipase C beta 3 |
located_in is_active_in |
IEA ISO |
GO_REF:0000107 (MGI:3703180|PMID:17298601) |
Ensembl RGD |
PMID:17298601 |
GO_REF:0000107 MGI:3703180 |
NCBI chr 1:204,143,257...204,160,384
Ensembl chr 1:204,144,956...204,160,228
|
|
G |
Prkcd |
protein kinase C, delta |
is_active_in |
IDA |
PMID:8263228 |
SynGO |
PMID:8263228 |
RGD:13702395 |
NCBI chr16:5,769,217...5,799,380
Ensembl chr16:5,769,215...5,799,352
|
|
G |
Prkcg |
protein kinase C, gamma |
is_active_in |
IDA |
PMID:2202488 |
SynGO |
PMID:2202488 |
RGD:13702285 |
NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
|
|
G |
Pten |
phosphatase and tensin homolog |
is_active_in |
IDA IMP |
PMID:26780512 |
SynGO |
PMID:26780512 PMID:26780512 |
RGD:11352897, RGD:11352897 |
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
|
|
G |
Rims3 |
regulating synaptic membrane exocytosis 3 |
is_active_in |
IDA |
PMID:17534942 |
SynGO |
PMID:17534942 |
RGD:13702423 |
NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
|
|
|
G |
Anks1b |
ankyrin repeat and sterile alpha motif domain containing 1B |
is_active_in |
IDA |
PMID:20575057 |
SynGO |
PMID:20575057 |
RGD:13702247 |
NCBI chr 7:24,313,339...25,479,307
Ensembl chr 7:24,312,843...25,477,693
|
|
G |
Arl6ip5 |
ADP-ribosylation factor like GTPase 6 interacting protein 5 |
is_active_in located_in |
ISO IEA |
(MGI:7316521|PMID:17897781) GO_REF:0000107 |
RGD Ensembl |
PMID:17897781 |
GO_REF:0000107 MGI:7316521 |
NCBI chr 4:129,810,650...129,838,628
Ensembl chr 4:129,810,645...129,838,608
|
|
G |
Baiap2 |
BAR/IMD domain containing adaptor protein 2 |
is_active_in |
IDA |
PMID:15673667 |
SynGO |
PMID:15673667 |
RGD:9684988 |
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
|
|
G |
Calb1 |
calbindin 1 |
is_active_in |
IDA |
PMID:12528187 |
SynGO |
PMID:12528187 |
RGD:727642 |
NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
|
|
G |
Camk2a |
calcium/calmodulin-dependent protein kinase II alpha |
is_active_in |
IDA |
PMID:17957478 |
SynGO |
PMID:17957478 |
RGD:13702290 |
NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
|
|
G |
Ctbp2 |
C-terminal binding protein 2 |
is_active_in |
ISO |
(MGI:6189269|PMID:22745816) |
RGD |
PMID:22745816 |
MGI:6189269 |
NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222
|
|
G |
Erc1 |
ELKS/RAB6-interacting/CAST family member 1 |
is_active_in |
ISO |
(MGI:6445017|PMID:32521280) |
RGD |
PMID:32521280 |
MGI:6445017 |
NCBI chr 4:152,763,664...153,055,724
Ensembl chr 4:152,767,419...153,055,639
|
|
G |
Fbxo45 |
F-box protein 45 |
is_active_in located_in |
ISO IEA |
(MGI:4452423|PMID:19996097) GO_REF:0000107 |
RGD Ensembl |
PMID:19996097 |
GO_REF:0000107 MGI:4452423 |
NCBI chr11:68,551,430...68,567,053
Ensembl chr11:68,551,122...68,566,800
|
|
G |
Fmr1 |
fragile X messenger ribonucleoprotein 1 |
is_active_in |
ISO |
(MGI:3833000|PMID:19193898) |
RGD |
PMID:19193898 |
MGI:3833000 |
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
|
|
G |
Gdi1 |
GDP dissociation inhibitor 1 |
is_active_in |
IDA |
PMID:20926670 |
SynGO |
PMID:20926670 |
RGD:13432355 |
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
|
|
G |
Hap1 |
huntingtin-associated protein 1 |
is_active_in |
IDA |
PMID:9742138 |
SynGO |
PMID:9742138 |
RGD:13702459 |
NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
|
|
G |
Haus8l2 |
HAUS augmin-like complex, subunit 8 like 2 |
located_in |
IEA |
GO_REF:0000118 |
TreeGrafter |
|
GO_REF:0000118 |
NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
|
|
G |
Hnrnpab |
heterogeneous nuclear ribonucleoprotein A/B |
is_active_in |
ISO |
(MGI:5317239|PMID:21471000) |
RGD |
PMID:21471000 |
MGI:5317239 |
NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
|
|
G |
Hsc70-ps1 |
heat shock cognate protein 70, pseudogene 1 |
located_in |
IEA |
GO_REF:0000118 |
TreeGrafter |
|
GO_REF:0000118 |
NCBI chr 2:164,044,226...164,046,344
Ensembl chr 2:164,044,261...164,046,336
|
|
G |
Hspa8 |
heat shock protein family A (Hsp70) member 8 |
located_in |
IDA IEA |
PMID:9878698 GO_REF:0000118 |
TreeGrafter |
PMID:9878698 |
GO_REF:0000118, RGD:10059325 |
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
|
|
G |
Hspa8-ps23 |
heat shock protein family A (Hsp70) member 8, pseudogene 23 |
located_in |
IEA |
GO_REF:0000118 |
TreeGrafter |
|
GO_REF:0000118 |
NCBI chr X:32,535,167...32,537,203
Ensembl chr X:32,535,155...32,537,257
|
|
G |
Htt |
huntingtin |
located_in is_active_in |
IEA ISO |
GO_REF:0000107 (PMID:7748555) |
Ensembl RGD |
PMID:7748555 |
GO_REF:0000107 |
NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
|
|
G |
Lrrk2 |
leucine-rich repeat kinase 2 |
is_active_in |
ISO |
(MGI:3711602|PMID:17341485) |
RGD |
PMID:17341485 |
MGI:3711602 |
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
|
|
G |
Marcks |
myristoylated alanine rich protein kinase C substrate |
is_active_in |
EXP IDA |
PMID:2332803 |
SynGO |
PMID:2332803 PMID:2332803 |
RGD:9685308, RGD:9685308 |
NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
|
|
G |
Marcksl1 |
MARCKS-like 1 |
is_active_in |
IDA IEP |
PMID:8557647 |
SynGO |
PMID:8557647 PMID:8557647 |
RGD:13702350, RGD:13702350 |
NCBI chr 5:141,851,491...141,853,814
Ensembl chr 5:141,850,110...141,853,817
|
|
G |
Ncs1 |
neuronal calcium sensor 1 |
is_active_in |
IDA |
PMID:11910115 |
SynGO |
PMID:11910115 |
RGD:13702284 |
NCBI chr 3:14,523,220...14,568,829
Ensembl chr 3:14,523,220...14,568,829
|
|
G |
Ogt |
O-linked N-acetylglucosamine (GlcNAc) transferase |
is_active_in |
IDA |
PMID:12618343 |
SynGO |
PMID:12618343 |
RGD:155230725 |
NCBI chr X:66,771,278...66,816,148
Ensembl chr X:66,771,349...66,816,146
|
|
G |
Pnkd |
PNKD metallo-beta-lactamase domain containing |
is_active_in |
ISO |
(MGI:5634213|PMID:25730884) |
RGD |
PMID:25730884 |
MGI:5634213 |
NCBI chr 9:75,868,620...75,937,126
Ensembl chr 9:75,867,468...75,937,124
|
|
G |
Ppfia2 |
PTPRF interacting protein alpha 2 |
is_active_in |
ISO |
(MGI:6120581|PMID:29439199) |
RGD |
PMID:29439199 |
MGI:6120581 |
NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
|
|
G |
Ppp3cc |
protein phosphatase 3 catalytic subunit gamma |
is_active_in |
ISO |
(MGI:5755317|PMID:26627835) |
RGD |
PMID:26627835 |
MGI:5755317 |
NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
|
|
G |
Prkca |
protein kinase C, alpha |
is_active_in |
ISO |
(MGI:5141567|PMID:21658591) |
RGD |
PMID:21658591 |
MGI:5141567 |
NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
|
|
G |
Prkcb |
protein kinase C, beta |
located_in is_active_in |
IEA ISO |
GO_REF:0000107 (MGI:5141567|PMID:21658591) |
Ensembl RGD |
PMID:21658591 |
GO_REF:0000107 MGI:5141567 |
NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
|
|
G |
Prkce |
protein kinase C, epsilon |
is_active_in |
IDA |
PMID:8481800 |
SynGO |
PMID:8481800 |
RGD:13702341 |
NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
|
|
G |
Prkcg |
protein kinase C, gamma |
is_active_in |
ISO |
(MGI:5637456|PMID:24794094) |
RGD |
PMID:24794094 |
MGI:5637456 |
NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
|
|
G |
Rabep1 |
rabaptin, RAB GTPase binding effector protein 1 |
is_active_in |
IDA IEP |
PMID:9742146 |
SynGO |
PMID:9742146 PMID:9742146 |
RGD:155230775, RGD:155230775 |
NCBI chr10:55,566,156...55,667,595
Ensembl chr10:55,566,185...55,665,973
|
|
G |
Sh3gl2 |
SH3 domain containing GRB2 like 2, endophilin A1 |
is_active_in |
ISO |
(MGI:5504308|PMID:23785143) |
RGD |
PMID:23785143 |
MGI:5504308 |
NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
|
|
G |
Sncb |
synuclein, beta |
is_active_in |
IDA |
PMID:7877458 |
SynGO |
PMID:7877458 |
RGD:13702277 |
NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012
|
|
G |
Stxbp1 |
syntaxin binding protein 1 |
is_active_in |
ISO |
(MGI:5613442|PMID:24590174) |
RGD |
PMID:24590174 |
MGI:5613442 |
NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
|
|
G |
Stxbp5 |
syntaxin binding protein 5 |
is_active_in |
IDA IEP |
PMID:9620695 |
SynGO |
PMID:9620695 PMID:9620695 |
RGD:1299498, RGD:1299498 |
NCBI chr 1:4,182,489...4,335,290
Ensembl chr 1:4,185,529...4,335,101
|
|
G |
Trim9 |
tripartite motif-containing 9 |
is_active_in |
IDA IEP |
PMID:11524423 |
SynGO |
PMID:11524423 PMID:11524423 |
RGD:631246, RGD:631246 |
NCBI chr 6:88,756,824...88,856,588
Ensembl chr 6:88,757,303...88,856,542
|
|
Term paths to the root
|