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ONTOLOGY REPORT - ANNOTATIONS


Term:region of cytosol
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Accession:GO:0099522 term browser browse the term
Definition:Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.


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postsynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOC aldolase, fructose-bisphosphate C located_in ISO PMID:9570792 SynGO PMID:9570792 RGD:13702209 NCBI chr12:44,823,376...44,827,273
Ensembl chr12:44,808,341...44,848,519
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 located_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr12:1,609,420...1,666,965
Ensembl chr12:1,603,538...1,670,076
JBrowse link
G CALB1 calbindin 1 located_in ISO PMID:15355314 SynGO PMID:15355314 RGD:13702370 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,198
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:10102820
PMID:17957478
SynGO PMID:10102820 PMID:17957478 RGD:12050143 RGD:13702290 NCBI chr 2:151,248,356...151,353,907
Ensembl chr 2:151,248,356...151,308,658
JBrowse link
G DAG1 dystroglycan 1 located_in ISO PMID:9446825 SynGO PMID:9446825 RGD:13702366 NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,329...32,092,453
JBrowse link
G DBN1 drebrin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:80,480,603...80,495,797
Ensembl chr 2:80,479,460...80,496,873
JBrowse link
G DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 located_in ISO PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr 2:64,761,672...64,764,482
Ensembl chr 2:64,750,820...64,765,485
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 located_in ISO PMID:17632064 SynGO PMID:17632064 RGD:10044262 NCBI chr12:2,285,679...2,311,750
Ensembl chr12:2,285,225...2,311,750
JBrowse link
G EIF4E eukaryotic translation initiation factor 4E located_in ISO PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr 8:121,409,633...121,464,467
Ensembl chr 8:121,409,731...121,466,899
JBrowse link
G EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 located_in ISO PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr15:48,423,001...48,443,373
Ensembl chr15:48,422,816...48,443,399
JBrowse link
G FBXO45 F-box protein 45 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,544,915...133,560,687
Ensembl chr13:133,545,394...133,560,707
JBrowse link
G FMR1 FMRP translational regulator 1 located_in ISO PMID:9144248 SynGO PMID:9144248 RGD:11059594 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G HAP1 huntingtin associated protein 1 located_in ISO PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr12:20,938,463...20,950,053
Ensembl chr12:20,939,554...20,950,051
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 located_in ISO PMID:25286195 SynGO PMID:25286195 RGD:13702460 NCBI chr18:46,205,164...46,215,861
Ensembl chr18:46,205,418...46,215,858
JBrowse link
G HOMER1 homer scaffold protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,116,664...88,253,843
Ensembl chr 2:88,122,877...88,255,281
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
ISO
IBA
PMID:9878698
(PMID:21873635)
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G HTT huntingtin located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G MTOR mechanistic target of rapamycin kinase located_in ISO PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G NCS1 neuronal calcium sensor 1 located_in ISO PMID:11910115 SynGO PMID:11910115 RGD:13702284 NCBI chr 1:270,274,504...270,334,908
Ensembl chr 1:270,274,499...270,334,907
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase located_in ISO (MGI:5763359|PMID:25505317) SynGO PMID:25505317 MGI:5763359 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,937...116,070,317
JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,715,898...68,729,471
Ensembl chr 2:68,715,880...68,729,469
JBrowse link
G PLCB3 phospholipase C beta 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,844,931...7,860,183
Ensembl chr 2:7,843,340...7,860,193
JBrowse link
G PRKCD protein kinase C delta located_in ISO PMID:8263228 SynGO PMID:8263228 RGD:13702395 NCBI chr13:35,290,835...35,323,245
Ensembl chr13:35,290,264...35,323,356
JBrowse link
G PRKCG protein kinase C gamma located_in ISO PMID:2202488 SynGO PMID:2202488 RGD:13702285 NCBI chr 6:56,213,479...56,235,683
Ensembl chr 6:56,213,483...56,234,656
JBrowse link
G PTEN phosphatase and tensin homolog located_in ISO PMID:26780512 SynGO PMID:26780512 RGD:11352897 NCBI chr14:99,929,590...100,021,619 JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 located_in ISO PMID:17534942 SynGO PMID:17534942 RGD:13702423 NCBI chr 6:170,506,392...170,546,939
Ensembl chr 6:170,506,426...170,546,939
JBrowse link
presynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B located_in ISO PMID:20575057 SynGO PMID:20575057 RGD:13702247 NCBI chr 5:84,080,505...85,148,742
Ensembl chr 5:84,080,666...85,166,486
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 located_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr12:1,609,420...1,666,965
Ensembl chr12:1,603,538...1,670,076
JBrowse link
G CALB1 calbindin 1 located_in ISO PMID:12528187 SynGO PMID:12528187 RGD:727642 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,198
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:17957478 SynGO PMID:17957478 RGD:13702290 NCBI chr 2:151,248,356...151,353,907
Ensembl chr 2:151,248,356...151,308,658
JBrowse link
G CTBP2 C-terminal binding protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:134,329,312...134,488,805
Ensembl chr14:134,329,941...134,487,755
JBrowse link
G FBXO45 F-box protein 45 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,544,915...133,560,687
Ensembl chr13:133,545,394...133,560,707
JBrowse link
G FMR1 FMRP translational regulator 1 located_in ISO (MGI:3833000|PMID:19193898) SynGO PMID:19193898 MGI:3833000 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G HAP1 huntingtin associated protein 1 located_in ISO PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr12:20,938,463...20,950,053
Ensembl chr12:20,939,554...20,950,051
JBrowse link
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B located_in ISO (MGI:5317239|PMID:21471000) SynGO PMID:21471000 MGI:5317239 NCBI chr 2:80,186,998...80,194,155 JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
ISO
IBA
PMID:9878698
(PMID:21873635)
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G HTT huntingtin located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:1,809,768...1,934,002
Ensembl chr 8:1,809,785...1,934,024
JBrowse link
G LRRK2 leucine rich repeat kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:71,800,337...71,945,828
Ensembl chr 5:71,800,240...71,944,938
JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate located_in ISO PMID:2332803 SynGO PMID:2332803 RGD:9685308 NCBI chr 1:79,789,796...79,795,895
Ensembl chr 1:79,789,815...79,795,762
JBrowse link
G MARCKSL1 MARCKS like 1 located_in ISO PMID:8557647 SynGO PMID:8557647 RGD:13702350 NCBI chr 6:88,785,412...88,787,772
Ensembl chr 6:88,786,175...88,787,769
JBrowse link
G NCS1 neuronal calcium sensor 1 located_in ISO PMID:11910115 SynGO PMID:11910115 RGD:13702284 NCBI chr 1:270,274,504...270,334,908
Ensembl chr 1:270,274,499...270,334,907
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 located_in ISO (MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:6120581 NCBI chr 5:99,818,591...100,279,029
Ensembl chr 5:99,819,405...100,279,028
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma located_in ISO (MGI:5755317|PMID:26627835) SynGO PMID:26627835 MGI:5755317 NCBI chr14:6,711,789...6,799,318
Ensembl chr14:6,639,206...6,803,670
JBrowse link
G PRKCA protein kinase C alpha located_in ISO (MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:5141567 NCBI chr12:12,882,287...13,268,647
Ensembl chr12:12,882,064...13,263,554
JBrowse link
G PRKCB protein kinase C beta located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:21,995,227...22,383,628
Ensembl chr 3:21,995,231...22,383,264
JBrowse link
G PRKCE protein kinase C epsilon located_in ISO PMID:8481800 SynGO PMID:8481800 RGD:13702341 NCBI chr 3:94,351,277...94,864,549
Ensembl chr 3:94,349,889...94,909,020
JBrowse link
G PRKCG protein kinase C gamma located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:56,213,479...56,235,683
Ensembl chr 6:56,213,483...56,234,656
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 located_in ISO (MGI:5504308|PMID:23785143) SynGO PMID:23785143 MGI:5504308 NCBI chr 1:205,081,227...205,285,359
Ensembl chr 1:205,081,227...205,285,343
JBrowse link
G SNCB synuclein beta located_in ISO PMID:7877458 SynGO PMID:7877458 RGD:13702277 NCBI chr 2:81,287,764...81,302,859
Ensembl chr 2:81,287,878...81,302,863
JBrowse link
G STXBP5 syntaxin binding protein 5 located_in ISO PMID:9620695 SynGO PMID:9620695 RGD:1299498 NCBI chr 1:18,343,826...18,512,750
Ensembl chr 1:18,345,363...18,513,252
JBrowse link
G TRIM9 tripartite motif containing 9 located_in ISO PMID:11524423 SynGO PMID:11524423 RGD:631246 NCBI chr 1:180,723,281...180,830,555
Ensembl chr 1:180,723,287...180,830,243
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16919
    cellular anatomical entity 16790
      cytosol 3467
        region of cytosol 41
          postsynaptic cytosol 26
          presynaptic cytosol 25
Path 2
Term Annotations click to browse term
  cellular_component 16919
    cellular anatomical entity 16790
      intracellular anatomical structure 12611
        cytoplasm 9857
          cytosol 3467
            region of cytosol 41
              postsynaptic cytosol 26
              presynaptic cytosol 25
paths to the root