Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:region of cytosol
go back to main search page
Accession:GO:0099522 term browser browse the term
Definition:Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.


show annotations for term's descendants           Sort by:
 
postsynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoc aldolase C, fructose-bisphosphate located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:78,323,073...78,327,781
Ensembl chr11:78,322,968...78,327,781
JBrowse link
G Baiap2 brain-specific angiogenesis inhibitor 1-associated protein 2 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:119,939,916...120,006,782
Ensembl chr11:119,942,763...120,006,782
JBrowse link
G Calb1 calbindin 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:60,925,307...60,988,152
Ensembl chr18:60,925,618...60,988,152
JBrowse link
G Dag1 dystroglycan 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:108,204,861...108,263,977
Ensembl chr 9:108,204,634...108,263,958
JBrowse link
G Dbn1 drebrin 1 located_in IDA (MGI:6189372|PMID:17559090) SynGO PMID:17559090 MGI:6189372 NCBI chr13:55,473,428...55,488,126
Ensembl chr13:55,473,429...55,488,111
JBrowse link
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:83,608,175...83,612,653
Ensembl chr 8:83,608,193...83,612,653
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:119,288,363...119,300,043
Ensembl chr11:119,288,363...119,300,089
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:138,526,191...138,559,696
Ensembl chr 3:138,526,179...138,559,696
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 8:27,260,327...27,275,656
Ensembl chr 8:27,260,329...27,276,674
JBrowse link
G Fbxo45 F-box protein 45 located_in IDA (MGI:4452423|PMID:19996097) SynGO PMID:19996097 MGI:4452423 NCBI chr16:32,230,112...32,247,025
Ensembl chr16:32,230,112...32,247,158
JBrowse link
G Fmr1 FMRP translational regulator 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr  X:68,678,536...68,717,963
Ensembl chr  X:68,678,541...68,717,963
JBrowse link
G Hap1 huntingtin-associated protein 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:100,347,327...100,356,982
Ensembl chr11:100,347,327...100,356,128
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:51,460,434...51,470,048
Ensembl chr 6:51,460,932...51,469,894
JBrowse link
G Homer1 homer scaffolding protein 1 located_in IDA (MGI:5570507|PMID:24530450) SynGO PMID:24530450 MGI:5570507 NCBI chr13:93,303,757...93,405,129
Ensembl chr13:93,299,635...93,405,129
JBrowse link
G Hspa8 heat shock protein 8 located_in
is_active_in
ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 NCBI chr 9:40,801,276...40,805,202
Ensembl chr 9:40,800,984...40,810,087
JBrowse link
G Htt huntingtin located_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:34,761,721...34,912,534
Ensembl chr 5:34,761,740...34,912,534
JBrowse link
G Mtor mechanistic target of rapamycin kinase located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:148,448,582...148,557,685
Ensembl chr 4:148,448,611...148,557,683
JBrowse link
G Ncs1 neuronal calcium sensor 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:31,245,708...31,295,989
Ensembl chr 2:31,245,823...31,295,989
JBrowse link
G Nedd4 neural precursor cell expressed, developmentally down-regulated 4 located_in IDA
IMP
(MGI:5763359|PMID:25505317) SynGO PMID:25505317 MGI:5763359 NCBI chr 9:72,662,331...72,749,851
Ensembl chr 9:72,662,346...72,749,852
JBrowse link
G Pin1 protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1 located_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:20,652,118...20,663,712
Ensembl chr 9:20,652,095...20,666,584
JBrowse link
G Plcb3 phospholipase C, beta 3 located_in IDA
IEP
(MGI:3703180|PMID:17298601) SynGO PMID:17298601 MGI:3703180 NCBI chr19:6,953,708...6,975,006
Ensembl chr19:6,952,325...6,976,470
JBrowse link
G Prkcd protein kinase C, delta located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr14:30,595,353...30,626,414
Ensembl chr14:30,595,354...30,626,210
JBrowse link
G Prkcg protein kinase C, gamma located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:3,303,532...3,331,099
Ensembl chr 7:3,289,179...3,331,099
JBrowse link
G Pten phosphatase and tensin homolog located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr19:32,757,577...32,826,160
Ensembl chr19:32,757,497...32,826,160
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:120,854,779...120,896,580
Ensembl chr 4:120,854,816...120,896,579
JBrowse link
presynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:89,872,915...90,973,300
Ensembl chr10:89,873,509...90,973,300
JBrowse link
G Baiap2 brain-specific angiogenesis inhibitor 1-associated protein 2 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:119,939,916...120,006,782
Ensembl chr11:119,942,763...120,006,782
JBrowse link
G Calb1 calbindin 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr18:60,925,307...60,988,152
Ensembl chr18:60,925,618...60,988,152
JBrowse link
G Ctbp2 C-terminal binding protein 2 located_in IDA (MGI:6189269|PMID:22745816) SynGO PMID:22745816 MGI:6189269 NCBI chr 7:132,986,998...133,124,009
Ensembl chr 7:132,987,563...133,124,354
JBrowse link
G Fbxo45 F-box protein 45 located_in IDA (MGI:4452423|PMID:19996097) SynGO PMID:19996097 MGI:4452423 NCBI chr16:32,230,112...32,247,025
Ensembl chr16:32,230,112...32,247,158
JBrowse link
G Fmr1 FMRP translational regulator 1 located_in IDA (MGI:3833000|PMID:19193898) SynGO PMID:19193898 MGI:3833000 NCBI chr  X:68,678,536...68,717,963
Ensembl chr  X:68,678,541...68,717,963
JBrowse link
G Hap1 huntingtin-associated protein 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:100,347,327...100,356,982
Ensembl chr11:100,347,327...100,356,128
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B located_in IDA (MGI:5317239|PMID:21471000) SynGO PMID:21471000 MGI:5317239 NCBI chr11:51,600,100...51,606,881
Ensembl chr11:51,600,100...51,606,847
JBrowse link
G Hspa8 heat shock protein 8 located_in
is_active_in
ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4417868 MGI:6201960 NCBI chr 9:40,801,276...40,805,202
Ensembl chr 9:40,800,984...40,810,087
JBrowse link
G Htt huntingtin located_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:34,761,721...34,912,534
Ensembl chr 5:34,761,740...34,912,534
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 located_in IDA (MGI:3711602|PMID:17341485) SynGO PMID:17341485 MGI:3711602 NCBI chr15:91,672,791...91,816,124
Ensembl chr15:91,673,175...91,816,120
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate located_in ISO PMID:2332803 SynGO PMID:2332803 RGD:9685308 NCBI chr10:37,133,243...37,138,926
Ensembl chr10:37,133,375...37,138,920
JBrowse link
G Marcksl1 MARCKS-like 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:129,513,581...129,515,981
Ensembl chr 4:129,513,581...129,515,985
JBrowse link
G Ncs1 neuronal calcium sensor 1 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:31,245,708...31,295,989
Ensembl chr 2:31,245,823...31,295,989
JBrowse link
G Ppfia2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 located_in IDA (MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:6120581 NCBI chr10:106,469,500...106,933,468
Ensembl chr10:106,470,339...106,935,952
JBrowse link
G Ppp3cc protein phosphatase 3, catalytic subunit, gamma isoform located_in IDA (MGI:5755317|PMID:26627835) SynGO PMID:26627835 MGI:5755317 NCBI chr14:70,217,864...70,289,536
Ensembl chr14:70,217,865...70,289,471
JBrowse link
G Prkca protein kinase C, alpha located_in IDA (MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:5141567 NCBI chr11:107,933,387...108,343,888
Ensembl chr11:107,933,387...108,343,928
JBrowse link
G Prkcb protein kinase C, beta located_in IDA (MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:5141567 NCBI chr 7:122,289,104...122,634,402
Ensembl chr 7:122,288,751...122,634,402
JBrowse link
G Prkce protein kinase C, epsilon located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr17:86,167,785...86,657,919
Ensembl chr17:86,167,785...86,657,919
JBrowse link
G Prkcg protein kinase C, gamma located_in IDA (MGI:5637456|PMID:24794094) SynGO PMID:24794094 MGI:5637456 NCBI chr 7:3,303,532...3,331,099
Ensembl chr 7:3,289,179...3,331,099
JBrowse link
G Sh3gl2 SH3-domain GRB2-like 2 located_in IDA (MGI:5504308|PMID:23785143) SynGO PMID:23785143 MGI:5504308 NCBI chr 4:85,205,456...85,389,380
Ensembl chr 4:85,205,126...85,639,195
JBrowse link
G Sncb synuclein, beta located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr13:54,758,860...54,766,622
Ensembl chr13:54,758,860...54,766,595
JBrowse link
G Stxbp5 syntaxin binding protein 5 (tomosyn) located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:9,755,547...9,901,287
Ensembl chr10:9,755,547...9,901,079
JBrowse link
G Trim9 tripartite motif-containing 9 located_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr12:70,244,533...70,347,869
Ensembl chr12:70,244,533...70,347,614
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28363
    cellular anatomical entity 19018
      cytosol 3778
        region of cytosol 41
          postsynaptic cytosol 26
          presynaptic cytosol 25
Path 2
Term Annotations click to browse term
  cellular_component 28363
    cellular anatomical entity 19018
      intracellular anatomical structure 14164
        cytoplasm 11389
          cytosol 3778
            region of cytosol 41
              postsynaptic cytosol 26
              presynaptic cytosol 25
paths to the root