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ONTOLOGY REPORT - ANNOTATIONS


Term:region of cytosol
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Accession:GO:0099522 term browser browse the term
Definition:Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.


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postsynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOC aldolase, fructose-bisphosphate C located_in ISO PMID:9570792 SynGO PMID:9570792 RGD:13702209 NCBI chr17:28,573,115...28,576,963
Ensembl chr17:28,573,115...28,576,948
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:81,035,131...81,117,434
Ensembl chr17:81,035,122...81,117,432
JBrowse link
G CALB1 calbindin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:90,058,608...90,082,879
Ensembl chr 8:90,058,608...90,095,475
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:10102820
PMID:17957478
SynGO PMID:10102820 PMID:17957478 RGD:12050143 RGD:13702290 NCBI chr 5:150,219,491...150,290,130
Ensembl chr 5:150,219,491...150,290,291
JBrowse link
G DAG1 dystroglycan 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:49,468,703...49,535,618
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G DBN1 drebrin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:177,456,610...177,480,368
Ensembl chr 5:177,456,608...177,474,401
JBrowse link
G DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 located_in ISO PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr19:14,514,769...14,530,597
Ensembl chr19:14,514,769...14,529,770
Ensembl chr19:14,514,769...14,529,770
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:80,134,369...80,147,128
Ensembl chr17:80,134,369...80,147,151
JBrowse link
G EIF4E eukaryotic translation initiation factor 4E located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:98,879,276...98,929,133
Ensembl chr 4:98,871,684...98,930,637
Ensembl chr 4:98,871,684...98,930,637
JBrowse link
G EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:38,030,534...38,060,365
Ensembl chr 8:38,030,534...38,060,365
JBrowse link
G FBXO45 F-box protein 45 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:196,568,660...196,589,059
Ensembl chr 3:196,568,611...196,589,059
JBrowse link
G FMR1 FMRP translational regulator 1 located_in ISO PMID:9144248 SynGO PMID:9144248 RGD:11059594 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,951...147,951,125
Ensembl chr  X:147,911,951...147,951,125
JBrowse link
G HAP1 huntingtin associated protein 1 located_in ISO PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr17:41,717,739...41,734,646
Ensembl chr17:41,717,742...41,734,644
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 located_in ISO PMID:25286195 SynGO PMID:25286195 RGD:13702460 NCBI chr 7:26,189,920...26,200,775
Ensembl chr 7:26,173,057...26,201,529
Ensembl chr 7:26,173,057...26,201,529
JBrowse link
G HOMER1 homer scaffold protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 5:79,372,636...79,514,134
Ensembl chr 5:79,372,636...79,514,134
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
ISO
IBA
PMID:9878698
(PMID:21873635)
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325 NCBI chr11:123,057,489...123,062,366
Ensembl chr11:123,057,489...123,063,230
JBrowse link
G HTT huntingtin located_in IDA (PMID:7748555) SynGO PMID:7748555 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,422...3,243,960
Ensembl chr 4:3,041,422...3,243,960
JBrowse link
G MTOR mechanistic target of rapamycin kinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G NCS1 neuronal calcium sensor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:130,172,404...130,237,303
Ensembl chr 9:130,172,404...130,237,303
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase located_in ISO (MGI:5763359|PMID:25505317) SynGO PMID:25505317 MGI:5763359 NCBI chr15:55,826,917...55,993,612
Ensembl chr15:55,826,922...55,993,746
Ensembl chr15:55,826,922...55,993,746
JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 located_in IDA (PMID:28458925) SynGO PMID:28458925 NCBI chr19:9,835,318...9,849,689
Ensembl chr19:9,835,257...9,849,682
Ensembl chr19:9,835,257...9,849,682
JBrowse link
G PLCB3 phospholipase C beta 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:64,251,530...64,269,452
Ensembl chr11:64,251,530...64,269,398
Ensembl chr11:64,251,530...64,269,398
Ensembl chr11:64,251,530...64,269,398
JBrowse link
G PRKCD protein kinase C delta located_in ISO PMID:8263228 SynGO PMID:8263228 RGD:13702395 NCBI chr 3:53,161,209...53,192,717
Ensembl chr 3:53,156,009...53,192,717
JBrowse link
G PRKCG protein kinase C gamma located_in IEA Ensembl GO_REF:0000107 NCBI chr19:53,882,197...53,907,652
Ensembl chr19:53,879,190...53,907,652
JBrowse link
G PTEN phosphatase and tensin homolog located_in IEA Ensembl GO_REF:0000107 NCBI chr10:87,863,625...87,971,930
Ensembl chr10:87,863,625...87,971,930
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 located_in ISO PMID:17534942 SynGO PMID:17534942 RGD:13702423 NCBI chr 1:40,620,680...40,692,104
Ensembl chr 1:40,620,680...40,665,682
JBrowse link
presynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B located_in ISO PMID:20575057 SynGO PMID:20575057 RGD:13702247 NCBI chr12:98,729,904...99,984,936
Ensembl chr12:98,726,457...99,984,654
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr17:81,035,131...81,117,434
Ensembl chr17:81,035,122...81,117,432
JBrowse link
G CALB1 calbindin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 8:90,058,608...90,082,879
Ensembl chr 8:90,058,608...90,095,475
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:17957478 SynGO PMID:17957478 RGD:13702290 NCBI chr 5:150,219,491...150,290,130
Ensembl chr 5:150,219,491...150,290,291
JBrowse link
G CTBP2 C-terminal binding protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr10:124,984,317...125,161,039
Ensembl chr10:124,984,317...125,161,170
JBrowse link
G FBXO45 F-box protein 45 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:196,568,660...196,589,059
Ensembl chr 3:196,568,611...196,589,059
JBrowse link
G FMR1 FMRP translational regulator 1 located_in ISO (MGI:3833000|PMID:19193898) SynGO PMID:19193898 MGI:3833000 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,951...147,951,125
Ensembl chr  X:147,911,951...147,951,125
JBrowse link
G HAP1 huntingtin associated protein 1 located_in ISO PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr17:41,717,739...41,734,646
Ensembl chr17:41,717,742...41,734,644
JBrowse link
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B located_in ISO (MGI:5317239|PMID:21471000) SynGO PMID:21471000 MGI:5317239 NCBI chr 5:178,204,533...178,211,163
Ensembl chr 5:178,204,533...178,211,163
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
ISO
IBA
PMID:9878698
(PMID:21873635)
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325 NCBI chr11:123,057,489...123,062,366
Ensembl chr11:123,057,489...123,063,230
JBrowse link
G HTT huntingtin located_in IDA (PMID:7748555) SynGO PMID:7748555 NCBI chr 4:3,074,681...3,243,960
Ensembl chr 4:3,041,422...3,243,960
Ensembl chr 4:3,041,422...3,243,960
JBrowse link
G LRRK2 leucine rich repeat kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:40,224,890...40,369,285
Ensembl chr12:40,196,744...40,369,285
JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate located_in ISO PMID:2332803 SynGO PMID:2332803 RGD:9685308 NCBI chr 6:113,857,345...113,863,475
Ensembl chr 6:113,857,345...113,863,475
JBrowse link
G MARCKSL1 MARCKS like 1 located_in ISO PMID:8557647 SynGO PMID:8557647 RGD:13702350 NCBI chr 1:32,333,839...32,336,233
Ensembl chr 1:32,333,839...32,336,233
JBrowse link
G NCS1 neuronal calcium sensor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:130,172,404...130,237,303
Ensembl chr 9:130,172,404...130,237,303
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 located_in ISO (MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:6120581 NCBI chr12:81,257,975...81,759,749
Ensembl chr12:81,257,975...81,759,553
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma located_in ISO (MGI:5755317|PMID:26627835) SynGO PMID:26627835 MGI:5755317 NCBI chr 8:22,441,053...22,541,466
Ensembl chr 8:22,440,819...22,541,142
JBrowse link
G PRKCA protein kinase C alpha located_in ISO (MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:5141567 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743
JBrowse link
G PRKCB protein kinase C beta located_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,835,983...24,220,611
Ensembl chr16:23,835,983...24,220,611
JBrowse link
G PRKCE protein kinase C epsilon located_in ISO PMID:8481800 SynGO PMID:8481800 RGD:13702341 NCBI chr 2:45,651,315...46,187,990
Ensembl chr 2:45,651,345...46,187,990
JBrowse link
G PRKCG protein kinase C gamma located_in IEA Ensembl GO_REF:0000107 NCBI chr19:53,882,197...53,907,652
Ensembl chr19:53,879,190...53,907,652
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 located_in ISO (MGI:5504308|PMID:23785143) SynGO PMID:23785143 MGI:5504308 NCBI chr 9:17,579,066...17,797,124
Ensembl chr 9:17,579,066...17,797,124
JBrowse link
G SNCB synuclein beta located_in ISO PMID:7877458 SynGO PMID:7877458 RGD:13702277 NCBI chr 5:176,620,082...176,630,556
Ensembl chr 5:176,620,082...176,630,556
JBrowse link
G STXBP5 syntaxin binding protein 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:147,204,184...147,390,476
Ensembl chr 6:147,204,425...147,390,476
JBrowse link
G TRIM9 tripartite motif containing 9 located_in ISO PMID:11524423 SynGO PMID:11524423 RGD:631246 NCBI chr14:50,975,261...51,105,173
Ensembl chr14:50,975,262...51,096,061
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19348
    cellular anatomical entity 19120
      cytosol 5495
        region of cytosol 41
          postsynaptic cytosol 26
          presynaptic cytosol 25
Path 2
Term Annotations click to browse term
  cellular_component 19348
    cellular anatomical entity 19120
      intracellular anatomical structure 15249
        cytoplasm 12330
          cytosol 5495
            region of cytosol 41
              postsynaptic cytosol 26
              presynaptic cytosol 25
paths to the root