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ONTOLOGY REPORT - ANNOTATIONS


Term:region of cytosol
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Accession:GO:0099522 term browser browse the term
Definition:Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.


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postsynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOC aldolase, fructose-bisphosphate C located_in ISO PMID:9570792 SynGO PMID:9570792 RGD:13702209 NCBI chr 9:42,778,637...42,782,950
Ensembl chr 9:42,778,637...42,782,479
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 located_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr 9:923,519...992,254
Ensembl chr 9:923,493...981,923
JBrowse link
G CALB1 calbindin 1 located_in ISO PMID:15355314 SynGO PMID:15355314 RGD:13702370 NCBI chr29:35,551,836...35,572,985
Ensembl chr29:35,552,436...35,572,925
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:10102820
PMID:17957478
SynGO PMID:10102820 PMID:17957478 RGD:12050143 RGD:13702290 NCBI chr 4:58,800,818...58,865,830
Ensembl chr 4:58,800,813...58,865,830
JBrowse link
G DAG1 dystroglycan 1 located_in ISO PMID:9446825 SynGO PMID:9446825 RGD:13702366 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G DBN1 drebrin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:35,899,969...35,913,015
Ensembl chr 4:35,889,392...35,912,507
JBrowse link
G DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 located_in ISO PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr20:48,120,604...48,131,091
Ensembl chr20:48,121,379...48,130,060
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 located_in ISO PMID:17632064 SynGO PMID:17632064 RGD:10044262 NCBI chr 9:1,582,950...1,593,893
Ensembl chr 9:1,582,993...1,593,892
JBrowse link
G EIF4E eukaryotic translation initiation factor 4E located_in ISO PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr32:21,064,202...21,108,998
Ensembl chr32:21,065,270...21,124,483
JBrowse link
G EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 located_in ISO PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr16:27,389,850...27,410,154
Ensembl chr16:27,390,181...27,410,110
JBrowse link
G FBXO45 F-box protein 45 located_in ISO (MGI:4452423|PMID:19996097) SynGO PMID:19996097 MGI:4452423 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189
JBrowse link
G FMR1 FMRP translational regulator 1 located_in ISO PMID:9144248 SynGO PMID:9144248 RGD:11059594 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G HAP1 huntingtin associated protein 1 located_in ISO PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr 9:21,065,770...21,074,462
Ensembl chr 9:21,065,846...21,072,991
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 located_in ISO PMID:25286195 SynGO PMID:25286195 RGD:13702460 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952
JBrowse link
G HOMER1 homer scaffold protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:27,395,337...27,525,822
Ensembl chr 3:27,400,839...27,523,320
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
ISO
IBA
PMID:9878698
(PMID:21873635)
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
G HTT huntingtin located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290
JBrowse link
G LOC607182 heat shock cognate 71 kDa protein-like is_active_in IBA (PMID:21873635) GO_Central PMID:21873635
G MTOR mechanistic target of rapamycin kinase located_in ISO PMID:11756682 SynGO PMID:11756682 RGD:13702327 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G NCS1 neuronal calcium sensor 1 located_in ISO PMID:11910115 SynGO PMID:11910115 RGD:13702284 NCBI chr 9:53,661,361...53,676,925
Ensembl chr 9:53,672,910...53,676,910
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase located_in ISO (MGI:5763359|PMID:25505317) SynGO PMID:25505317 MGI:5763359 NCBI chr30:21,123,333...21,229,907
Ensembl chr30:21,126,043...21,229,870
JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr20:51,156,887...51,168,131
Ensembl chr20:51,157,121...51,168,136
JBrowse link
G PLCB3 phospholipase C beta 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,793,848...52,809,065
Ensembl chr18:52,793,838...52,809,070
JBrowse link
G PRKCD protein kinase C delta located_in ISO PMID:8263228 SynGO PMID:8263228 RGD:13702395 NCBI chr20:36,723,491...36,751,982
Ensembl chr20:36,723,809...36,752,191
JBrowse link
G PRKCG protein kinase C gamma located_in ISO PMID:2202488 SynGO PMID:2202488 RGD:13702285 NCBI chr 1:103,295,110...103,312,562 JBrowse link
G PTEN phosphatase and tensin homolog located_in ISO PMID:26780512 SynGO PMID:26780512 RGD:11352897 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 located_in ISO PMID:17534942 SynGO PMID:17534942 RGD:13702423 NCBI chr15:2,353,876...2,391,742
Ensembl chr15:2,353,693...2,404,431
JBrowse link
presynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B located_in ISO PMID:20575057 SynGO PMID:20575057 RGD:13702247 NCBI chr15:38,128,114...39,186,341
Ensembl chr15:38,129,140...39,186,399
JBrowse link
G BAIAP2 BAR/IMD domain containing adaptor protein 2 located_in ISO PMID:15673667 SynGO PMID:15673667 RGD:9684988 NCBI chr 9:923,519...992,254
Ensembl chr 9:923,493...981,923
JBrowse link
G CALB1 calbindin 1 located_in ISO PMID:12528187 SynGO PMID:12528187 RGD:727642 NCBI chr29:35,551,836...35,572,985
Ensembl chr29:35,552,436...35,572,925
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha located_in ISO PMID:17957478 SynGO PMID:17957478 RGD:13702290 NCBI chr 4:58,800,818...58,865,830
Ensembl chr 4:58,800,813...58,865,830
JBrowse link
G CTBP2 C-terminal binding protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr28:34,259,912...34,415,113
Ensembl chr28:34,260,856...34,415,696
JBrowse link
G FBXO45 F-box protein 45 located_in ISO (MGI:4452423|PMID:19996097) SynGO PMID:19996097 MGI:4452423 NCBI chr33:29,627,762...29,642,175
Ensembl chr33:29,635,831...29,639,189
JBrowse link
G FMR1 FMRP translational regulator 1 located_in ISO (MGI:3833000|PMID:19193898) SynGO PMID:19193898 MGI:3833000 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G HAP1 huntingtin associated protein 1 located_in ISO PMID:9742138 SynGO PMID:9742138 RGD:13702459 NCBI chr 9:21,065,770...21,074,462
Ensembl chr 9:21,065,846...21,072,991
JBrowse link
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B located_in ISO (MGI:5317239|PMID:21471000) SynGO PMID:21471000 MGI:5317239 NCBI chr11:3,355,051...3,360,376
Ensembl chr11:3,355,050...3,360,258
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
ISO
IBA
PMID:9878698
(PMID:21873635)
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
G HTT huntingtin located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290
JBrowse link
G LOC607182 heat shock cognate 71 kDa protein-like is_active_in IBA (PMID:21873635) GO_Central PMID:21873635
G LRRK2 leucine rich repeat kinase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G MARCKS myristoylated alanine rich protein kinase C substrate located_in ISO PMID:2332803 SynGO PMID:2332803 RGD:9685308 NCBI chr12:69,980,003...69,987,150
Ensembl chr12:69,980,433...69,984,848
JBrowse link
G MARCKSL1 MARCKS like 1 located_in ISO PMID:8557647 SynGO PMID:8557647 RGD:13702350 NCBI chr 2:68,898,750...68,901,139
Ensembl chr 2:68,892,492...68,901,031
JBrowse link
G NCS1 neuronal calcium sensor 1 located_in ISO PMID:11910115 SynGO PMID:11910115 RGD:13702284 NCBI chr 9:53,661,361...53,676,925
Ensembl chr 9:53,672,910...53,676,910
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 located_in ISO (MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:6120581 NCBI chr15:23,481,370...23,950,412
Ensembl chr15:23,482,549...23,951,141
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma located_in ISO (MGI:5755317|PMID:26627835) SynGO PMID:26627835 MGI:5755317 NCBI chr25:34,732,268...34,839,743
Ensembl chr25:34,725,226...34,838,994
JBrowse link
G PRKCA protein kinase C alpha located_in ISO (MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:5141567 NCBI chr 9:13,638,106...13,879,571
Ensembl chr 9:13,644,010...13,967,630
JBrowse link
G PRKCB protein kinase C beta located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:21,742,970...22,064,360
Ensembl chr 6:21,742,973...22,065,185
JBrowse link
G PRKCE protein kinase C epsilon located_in ISO PMID:8481800 SynGO PMID:8481800 RGD:13702341 NCBI chr10:47,976,929...48,464,614
Ensembl chr10:47,976,768...48,535,296
JBrowse link
G PRKCG protein kinase C gamma located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,295,110...103,312,562 JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 located_in ISO (MGI:5504308|PMID:23785143) SynGO PMID:23785143 MGI:5504308 NCBI chr11:37,720,793...37,769,027
Ensembl chr11:37,577,053...37,767,572
JBrowse link
G SNCB synuclein beta located_in ISO PMID:7877458 SynGO PMID:7877458 RGD:13702277 NCBI chr 4:36,710,236...36,719,455
Ensembl chr 4:36,616,039...36,764,501
JBrowse link
G STXBP5 syntaxin binding protein 5 located_in ISO PMID:9620695 SynGO PMID:9620695 RGD:1299498 NCBI chr 1:38,271,238...38,439,088
Ensembl chr 1:38,271,154...38,434,042
JBrowse link
G TRIM9 tripartite motif containing 9 located_in ISO PMID:11524423 SynGO PMID:11524423 RGD:631246 NCBI chr 8:27,334,045...27,441,238
Ensembl chr 8:27,336,063...27,441,445
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16552
    cellular anatomical entity 16416
      cytosol 3530
        region of cytosol 42
          postsynaptic cytosol 27
          presynaptic cytosol 26
Path 2
Term Annotations click to browse term
  cellular_component 16552
    cellular anatomical entity 16416
      intracellular anatomical structure 12780
        cytoplasm 9967
          cytosol 3530
            region of cytosol 42
              postsynaptic cytosol 27
              presynaptic cytosol 26
paths to the root