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ONTOLOGY REPORT - ANNOTATIONS


Term:cytosolic region
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Accession:GO:0099522 term browser browse the term
Definition:Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.
Synonyms:exact_synonym: region of cytosol


show annotations for term's descendants           Sort by:
 
postsynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07011951.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07033324.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:17,466,782...17,468,721 JBrowse link
G AABR07048992.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Aldoc aldolase, fructose-bisphosphate C part_of
is_active_in
IDA PMID:9570792 SynGO PMID:9570792 PMID:9570792 RGD:13702209, RGD:13702209 NCBI chr10:63,217,477...63,221,066
Ensembl chr10:63,217,451...63,221,066
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 is_active_in
part_of
IDA PMID:15673667 SynGO PMID:15673667 PMID:15673667 RGD:9684988, RGD:9684988 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Calb1 calbindin 1 part_of
is_active_in
IDA PMID:15355314 SynGO PMID:15355314 PMID:15355314 RGD:13702370, RGD:13702370 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha located_in
part_of
is_active_in
IDA PMID:10102820
PMID:17957478
SynGO PMID:10102820 PMID:17957478 PMID:17957478 RGD:12050143, RGD:13702290, RGD:13702290 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Dag1 dystroglycan 1 is_active_in
part_of
IDA PMID:9446825 SynGO PMID:9446825 PMID:9446825 RGD:13702366, RGD:13702366 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Dbn1 drebrin 1 located_in IEA
ISO
GO_REF:0000107
(MGI:6189372|PMID:17559090)
Ensembl
RGD
PMID:17559090 GO_REF:0000107 MGI:6189372 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 located_in IDA PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr19:24,522,717...24,526,458
Ensembl chr19:24,522,717...24,526,458
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 is_active_in
part_of
IDA PMID:17632064 SynGO PMID:17632064 PMID:17632064 RGD:10044262, RGD:10044262 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E is_active_in
part_of
IDA PMID:11756682 SynGO PMID:11756682 PMID:11756682 RGD:13702327, RGD:13702327 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 is_active_in
part_of
IDA PMID:11756682 SynGO PMID:11756682 PMID:11756682 RGD:13702327, RGD:13702327 NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984
JBrowse link
G Fbxo45 F-box protein 45 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:4452423|PMID:19996097)
Ensembl
RGD
PMID:19996097 GO_REF:0000107 MGI:4452423 NCBI chr11:68,551,430...68,567,053 JBrowse link
G Fmr1 FMRP translational regulator 1 is_active_in
part_of
IDA PMID:9144248 SynGO PMID:9144248 PMID:9144248 RGD:11059594, RGD:11059594 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Hap1 huntingtin-associated protein 1 part_of
is_active_in
IDA PMID:9742138 SynGO PMID:9742138 PMID:9742138 RGD:13702459, RGD:13702459 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 part_of
is_active_in
IDA PMID:25286195 SynGO PMID:25286195 PMID:25286195 RGD:13702460, RGD:13702460 NCBI chr 4:80,534,659...80,545,297
Ensembl chr 4:80,534,651...80,545,249
JBrowse link
G Homer1 homer scaffold protein 1 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:5570507|PMID:24530450)
Ensembl
RGD
PMID:24530450 GO_REF:0000107 MGI:5570507 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Hsc70-ps1 heat shock cognate protein 70, pseudogene 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:164,044,226...164,046,344 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
IDA
IBA
PMID:9878698
PMID:21873635
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325, RGD:13792537 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Htt huntingtin located_in
is_active_in
part_of
IEA
ISO
GO_REF:0000107
(PMID:7748555)
Ensembl
RGD
PMID:7748555 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G LOC100363133 heat shock cognate 71 kDa protein-like is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:155,934,803...155,936,915 JBrowse link
G LOC680121 similar to heat shock protein 8 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
JBrowse link
G Mtor mechanistic target of rapamycin kinase is_active_in
part_of
IDA PMID:11756682 SynGO PMID:11756682 PMID:11756682 RGD:13702327, RGD:13702327 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Ncs1 neuronal calcium sensor 1 part_of
is_active_in
IDA PMID:11910115 SynGO PMID:11910115 PMID:11910115 RGD:13702284, RGD:13702284 NCBI chr 3:14,523,220...14,568,829
Ensembl chr 3:14,523,220...14,568,829
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase located_in
is_active_in
ISO (MGI:5763359|PMID:25505317) RGD PMID:25505317 MGI:5763359 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 part_of
is_active_in
ISO (PMID:28458925) RGD PMID:28458925 NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785
JBrowse link
G Plcb3 phospholipase C beta 3 located_in IEA
ISO
GO_REF:0000107
(MGI:3703180|PMID:17298601)
Ensembl
RGD
PMID:17298601 GO_REF:0000107 MGI:3703180 NCBI chr 1:204,143,257...204,160,384
Ensembl chr 1:204,144,956...204,160,228
JBrowse link
G Prkcd protein kinase C, delta is_active_in
part_of
IDA PMID:8263228 SynGO PMID:8263228 PMID:8263228 RGD:13702395, RGD:13702395 NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
JBrowse link
G Prkcg protein kinase C, gamma is_active_in
part_of
IDA PMID:2202488 SynGO PMID:2202488 PMID:2202488 RGD:13702285, RGD:13702285 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Pten phosphatase and tensin homolog is_active_in
part_of
IDA
IMP
PMID:26780512 SynGO PMID:26780512 PMID:26780512 PMID:26780512 PMID:26780512 RGD:11352897, RGD:11352897, RGD:11352897, RGD:11352897 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 is_active_in
part_of
IDA PMID:17534942 SynGO PMID:17534942 PMID:17534942 RGD:13702423, RGD:13702423 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
JBrowse link
presynaptic cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07011951.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07033324.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr11:17,466,782...17,468,721 JBrowse link
G AABR07048992.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B is_active_in
part_of
IDA PMID:20575057 SynGO PMID:20575057 PMID:20575057 RGD:13702247, RGD:13702247 NCBI chr 7:24,313,810...25,479,307
Ensembl chr 7:24,312,843...25,477,693
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 part_of
is_active_in
IDA PMID:15673667 SynGO PMID:15673667 PMID:15673667 RGD:9684988, RGD:9684988 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Calb1 calbindin 1 part_of
is_active_in
IDA PMID:12528187 SynGO PMID:12528187 PMID:12528187 RGD:727642, RGD:727642 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha part_of
is_active_in
IDA PMID:17957478 SynGO PMID:17957478 PMID:17957478 RGD:13702290, RGD:13702290 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Ctbp2 C-terminal binding protein 2 is_active_in ISO (MGI:6189269|PMID:22745816) RGD PMID:22745816 MGI:6189269 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222
JBrowse link
G Fbxo45 F-box protein 45 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:4452423|PMID:19996097)
Ensembl
RGD
PMID:19996097 GO_REF:0000107 MGI:4452423 NCBI chr11:68,551,430...68,567,053 JBrowse link
G Fmr1 FMRP translational regulator 1 is_active_in
located_in
ISO (MGI:3833000|PMID:19193898) RGD PMID:19193898 MGI:3833000 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Hap1 huntingtin-associated protein 1 part_of
is_active_in
IDA PMID:9742138 SynGO PMID:9742138 PMID:9742138 RGD:13702459, RGD:13702459 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B located_in ISO (MGI:5317239|PMID:21471000) RGD PMID:21471000 MGI:5317239 NCBI chr10:35,857,040...35,862,935
Ensembl chr10:35,857,041...35,863,344
JBrowse link
G Hsc70-ps1 heat shock cognate protein 70, pseudogene 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:164,044,226...164,046,344 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 located_in
is_active_in
IDA
IBA
PMID:9878698
PMID:21873635
SynGO
GO_Central
PMID:9878698 PMID:21873635 RGD:10059325, RGD:13792537 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Htt huntingtin located_in
is_active_in
part_of
IEA
ISO
GO_REF:0000107
(PMID:7748555)
Ensembl
RGD
PMID:7748555 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G LOC100363133 heat shock cognate 71 kDa protein-like is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:155,934,803...155,936,915 JBrowse link
G LOC680121 similar to heat shock protein 8 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 is_active_in
located_in
ISO (MGI:3711602|PMID:17341485) RGD PMID:17341485 MGI:3711602 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Marcks myristoylated alanine rich protein kinase C substrate part_of
is_active_in
EXP
IDA
PMID:2332803 SynGO PMID:2332803 PMID:2332803 PMID:2332803 PMID:2332803 RGD:9685308, RGD:9685308, RGD:9685308, RGD:9685308 NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
JBrowse link
G Marcksl1 MARCKS-like 1 part_of
is_active_in
IDA PMID:8557647 SynGO PMID:8557647 PMID:8557647 RGD:13702350, RGD:13702350 NCBI chr 5:141,851,491...141,853,814
Ensembl chr 5:141,850,110...141,853,817
JBrowse link
G Ncs1 neuronal calcium sensor 1 part_of
is_active_in
IDA PMID:11910115 SynGO PMID:11910115 PMID:11910115 RGD:13702284, RGD:13702284 NCBI chr 3:14,523,220...14,568,829
Ensembl chr 3:14,523,220...14,568,829
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 located_in ISO (MGI:6120581|PMID:29439199) RGD PMID:29439199 MGI:6120581 NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma is_active_in
located_in
ISO (MGI:5755317|PMID:26627835) RGD PMID:26627835 MGI:5755317 NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
JBrowse link
G Prkca protein kinase C, alpha is_active_in ISO (MGI:5141567|PMID:21658591) RGD PMID:21658591 MGI:5141567 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Prkcb protein kinase C, beta located_in IEA
ISO
GO_REF:0000107
(MGI:5141567|PMID:21658591)
Ensembl
RGD
PMID:21658591 GO_REF:0000107 MGI:5141567 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Prkce protein kinase C, epsilon part_of
is_active_in
IDA PMID:8481800 SynGO PMID:8481800 PMID:8481800 RGD:13702341, RGD:13702341 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Prkcg protein kinase C, gamma located_in ISO (MGI:5637456|PMID:24794094) RGD PMID:24794094 MGI:5637456 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 located_in ISO (MGI:5504308|PMID:23785143) RGD PMID:23785143 MGI:5504308 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Sncb synuclein, beta is_active_in
part_of
IDA PMID:7877458 SynGO PMID:7877458 PMID:7877458 RGD:13702277, RGD:13702277 NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012
JBrowse link
G Stxbp5 syntaxin binding protein 5 is_active_in
part_of
IDA PMID:9620695 SynGO PMID:9620695 PMID:9620695 RGD:1299498, RGD:1299498 NCBI chr 1:4,182,489...4,335,271
Ensembl chr 1:4,185,529...4,335,101
JBrowse link
G Trim9 tripartite motif-containing 9 part_of
is_active_in
IDA PMID:11524423 SynGO PMID:11524423 PMID:11524423 RGD:631246, RGD:631246 NCBI chr 6:88,756,824...88,856,588
Ensembl chr 6:88,757,303...88,856,542
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      cytosol 4227
        cytosolic region 47
          postsynaptic cytosol 32
          presynaptic cytosol 31
Path 2
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      intracellular anatomical structure 14388
        cytoplasm 11359
          cytosol 4227
            cytosolic region 47
              postsynaptic cytosol 32
              presynaptic cytosol 31
paths to the root