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ONTOLOGY REPORT - ANNOTATIONS


Term:region of cytosol
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Accession:GO:0099522 term browser browse the term
Definition:Any (proper) part of the cytosol of a single cell of sufficient size to still be considered cytosol.


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postsynaptic cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07011951.1 RGD:13792537
G AABR07033324.1 RGD:13792537
G AABR07048992.1 RGD:13792537
G Aldoc aldolase, fructose-bisphosphate C JBrowse link 10 65,586,504 65,590,093 RGD:13702209
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684988
G Calb1 calbindin 1 JBrowse link 5 29,538,380 29,562,774 RGD:13702370
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:12050143
RGD:13702290
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:13702366
G Dbn1 drebrin 1 JBrowse link 17 9,679,511 9,693,878 RGD:1600115
RGD:1624291
G Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 JBrowse link 19 24,747,178 24,750,919 RGD:10059325
G Eif4a3 eukaryotic translation initiation factor 4A3 JBrowse link 10 108,415,201 108,425,195 RGD:10044262
G Eif4e eukaryotic translation initiation factor 4E JBrowse link 2 243,819,616 243,853,987 RGD:13702327
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 JBrowse link 16 68,954,860 68,968,248 RGD:13702327
G Fbxo45 F-box protein 45 JBrowse link 11 71,795,977 71,811,858 RGD:1600115
RGD:1624291
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:11059594
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:13702459
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:13702460
G Homer1 homer scaffold protein 1 JBrowse link 2 22,909,550 23,012,303 RGD:1624291
RGD:1600115
G Hsc70-ps1 heat shock cognate protein 70, pseudogene 1 JBrowse link 2 177,651,231 177,653,349 RGD:13792537
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059325
RGD:13792537
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1600115
RGD:1624291
G LOC100363133 heat shock cognate 71 kDa protein-like JBrowse link 5 99,030,998 99,033,110 RGD:13792537
G LOC680121 similar to heat shock protein 8 JBrowse link 11 13,499,168 13,501,271 RGD:13792537
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:13702327
G Ncs1 neuronal calcium sensor 1 JBrowse link 3 10,556,250 10,602,672 RGD:13702284
G Nedd4 NEDD4 E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:1600115
RGD:1624291
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 JBrowse link 8 21,669,236 21,680,615 RGD:1624291
G Plcb3 phospholipase C beta 3 JBrowse link 1 222,207,887 222,224,993 RGD:1600115
RGD:1624291
G Prkcd protein kinase C, delta JBrowse link 16 6,655,131 6,675,746 RGD:13702395
G Prkcg protein kinase C, gamma JBrowse link 1 64,407,098 64,433,698 RGD:13702285
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:11352897
G Rims3 regulating synaptic membrane exocytosis 3 JBrowse link 5 139,790,395 139,819,014 RGD:13702423
presynaptic cytosol term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07011951.1 RGD:13792537
G AABR07033324.1 RGD:13792537
G AABR07048992.1 RGD:13792537
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B JBrowse link 7 30,507,135 31,684,604 RGD:13702247
G Baiap2 BAR/IMD domain containing adaptor protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:9684988
G Calb1 calbindin 1 JBrowse link 5 29,538,380 29,562,774 RGD:727642
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:13702290
G Ctbp2 C-terminal binding protein 2 JBrowse link 1 205,001,354 205,030,565 RGD:1624291
G Fbxo45 F-box protein 45 JBrowse link 11 71,795,977 71,811,858 RGD:1600115
RGD:1624291
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:1624291
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:13702459
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B JBrowse link 10 34,955,713 34,961,662 RGD:1624291
G Hsc70-ps1 heat shock cognate protein 70, pseudogene 1 JBrowse link 2 177,651,231 177,653,349 RGD:13792537
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059325
RGD:13792537
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1600115
RGD:1624291
G LOC100363133 heat shock cognate 71 kDa protein-like JBrowse link 5 99,030,998 99,033,110 RGD:13792537
G LOC680121 similar to heat shock protein 8 JBrowse link 11 13,499,168 13,501,271 RGD:13792537
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:1624291
G Marcks myristoylated alanine rich protein kinase C substrate JBrowse link 20 42,966,140 42,971,838 RGD:9685308
G Marcksl1 MARCKS-like 1 JBrowse link 5 147,714,163 147,716,486 RGD:13702350
G Ncs1 neuronal calcium sensor 1 JBrowse link 3 10,556,250 10,602,672 RGD:13702284
G Ppfia2 PTPRF interacting protein alpha 2 JBrowse link 7 48,548,932 49,045,852 RGD:1624291
G Ppp3cc protein phosphatase 3 catalytic subunit gamma JBrowse link 15 51,896,427 51,968,075 RGD:1624291
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:1624291
G Prkcb protein kinase C, beta JBrowse link 1 192,233,569 192,575,339 RGD:1600115
RGD:1624291
G Prkce protein kinase C, epsilon JBrowse link 6 9,483,400 9,973,396 RGD:13702341
G Prkcg protein kinase C, gamma JBrowse link 1 64,407,098 64,433,698 RGD:1624291
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 JBrowse link 5 103,479,767 103,654,507 RGD:1624291
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:13702277
G Stxbp5 syntaxin binding protein 5 JBrowse link 1 3,858,917 4,011,684 RGD:1299498
G Trim9 tripartite motif-containing 9 JBrowse link 6 92,660,026 92,760,036 RGD:631246

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20300
    cellular anatomical entity 19956
      cytosol 4143
        region of cytosol 47
          postsynaptic cytosol 32
          presynaptic cytosol 31
Path 2
Term Annotations click to browse term
  cellular_component 20300
    intracellular 14243
      cytoplasm 11099
        cytosol 4143
          region of cytosol 47
            postsynaptic cytosol 32
            presynaptic cytosol 31
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.