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ONTOLOGY REPORT - ANNOTATIONS


Term:dense core granule cytoskeletal transport
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Accession:GO:0099519 term browser browse the term
Definition:The directed movement of dense core granules along cytoskeletal fibers, such as microtubules or actin filaments.
Synonyms:exact_synonym: dense core vesicle cytoskeletal trafficking



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dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IMP PMID:30021165
PMID:29166604
UniProt PMID:30021165 PMID:29166604 RGD:14995321, RGD:15023486 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO (PMID:30021165) RGD PMID:30021165 NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
JBrowse link
G Syt4 synaptotagmin 4 involved_in IMP
ISO
PMID:29166604
(MGI:6104122|PMID:29166604)
RGD PMID:29166604 PMID:29166604 MGI:6104122, RGD:15023486 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in IMP PMID:30021165 UniProt PMID:30021165 RGD:14995321 NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
JBrowse link
anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
JBrowse link
G Kif1b kinesin family member 1B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778
JBrowse link
G Kif1c kinesin family member 1C involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:55,414,412...55,444,587
Ensembl chr10:55,415,900...55,443,545
JBrowse link
G Sybu syntabulin IMP RGD PMID:17611281 RGD:13217407 NCBI chr 7:75,847,000...75,948,919
Ensembl chr 7:75,847,003...75,948,828
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
JBrowse link
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Trim46 tripartite motif-containing 46 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 IMP RGD PMID:22127389 RGD:12790715 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480
JBrowse link
G Kif1b kinesin family member 1B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778
JBrowse link
G Kif1c kinesin family member 1C involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr10:55,414,412...55,444,587
Ensembl chr10:55,415,900...55,443,545
JBrowse link
G Kif5a kinesin family member 5A involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
JBrowse link
G Kif5b kinesin family member 5B involved_in IGI PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr17:51,489,873...51,527,508
Ensembl chr17:51,489,944...51,527,508
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20094
    cellular process 18691
      cellular localization 3592
        intracellular transport 1617
          cytoskeleton-dependent intracellular transport 205
            vesicle cytoskeletal trafficking 72
              dense core granule cytoskeletal transport 12
                anterograde neuronal dense core vesicle transport + 7
                retrograde neuronal dense core vesicle transport + 6
Path 2
Term Annotations click to browse term
  biological_process 20094
    localization 5647
      cellular localization 3592
        establishment of localization in cell 2292
          intracellular transport 1617
            cytoskeleton-dependent intracellular transport 205
              vesicle cytoskeletal trafficking 72
                dense core granule cytoskeletal transport 12
                  anterograde neuronal dense core vesicle transport + 7
                  retrograde neuronal dense core vesicle transport + 6
paths to the root