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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic vesicle cycle
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Accession:GO:0099504 term browser browse the term
Definition:A biological process in which synaptic vesicles are loaded with neurotransmitters, move to the active zone, exocytose and are then recycled via endocytosis, ultimately leading to reloading with neurotransmitters.

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synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISO (PMID:22542182) SynGO PMID:22542182 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290 		JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (MGI:5707546|PMID:26444684) ARUK-UCL PMID:26444684 MGI:5707546 NCBI chrNW_004624832:1,975,448...1,995,102
Ensembl chrNW_004624832:1,975,314...1,995,056 		JBrowse link
G Stxbp5 syntaxin binding protein 5 involved_in ISO PMID:27807164 SynGO PMID:27807164 RGD:13702312 NCBI chrNW_004624785:10,692,573...10,874,358
Ensembl chrNW_004624785:10,692,257...10,874,285 		JBrowse link
G Syn1 synapsin I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624978:110,640...179,910
Ensembl chrNW_004624978:110,506...180,568 		JBrowse link
G Syn2 synapsin II involved_in ISO (PMID:7777057) SynGO PMID:7777057 NCBI chrNW_004624956:302,239...467,319
Ensembl chrNW_004624956:303,011...349,857 		JBrowse link
G Syn3 synapsin III involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624750:1,663,309...1,976,738
Ensembl chrNW_004624750:1,699,107...1,972,252 		JBrowse link
aminergic neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chrNW_004624740:3,674,727...3,732,058
Ensembl chrNW_004624740:3,674,609...3,732,676 		JBrowse link
G Slc18a1 solute carrier family 18 member A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:15,863,410...15,894,958
Ensembl chrNW_004624758:15,864,204...15,894,529 		JBrowse link
G Slc18a2 solute carrier family 18 member A2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:19903816 GO_REF:0000118 RGD:5128868 NCBI chrNW_004624737:29,356,590...29,388,099
Ensembl chrNW_004624737:29,358,696...29,387,808 		JBrowse link
G Th tyrosine hydroxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chrNW_004624767:15,003,073...15,010,207
Ensembl chrNW_004624767:15,003,092...15,010,154 		JBrowse link
calcium ion-regulated exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (PMID:10670432) MGI PMID:10670432 NCBI chrNW_004624901:707,322...932,658
Ensembl chrNW_004624901:708,234...932,643 		JBrowse link
G Doc2b double C2 domain beta involved_in ISO (MGI:4439222|PMID:20150444) UniProt PMID:20150444 MGI:4439222 RGD:8554647 NCBI chrNW_004624786:4,029,384...4,060,676
Ensembl chrNW_004624786:4,029,390...4,060,196 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17124501) MGI
TreeGrafter		 PMID:17124501 GO_REF:0000118 NCBI chrNW_004624763:20,027,601...20,567,288
Ensembl chrNW_004624763:20,027,574...20,567,688 		JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:83,904...122,978
Ensembl chrNW_004624892:89,691...123,037 		JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:9,654,266...9,720,522
Ensembl chrNW_004624790:9,658,850...9,721,084 		JBrowse link
G Snap25 synaptosome associated protein 25 ISO RGD PMID:14980208 RGD:1581082 NCBI chrNW_004624741:11,218,259...11,303,406
Ensembl chrNW_004624741:11,274,490...11,302,813 		JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:3803800|PMID:18703708) ParkinsonsUK-UCL PMID:18703708 MGI:3803800 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911 		JBrowse link
G Syt1 synaptotagmin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21521611) Ensembl
TreeGrafter
MGI		 PMID:21521611 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624750:18,774,670...19,313,932
Ensembl chrNW_004624750:18,774,570...18,989,659 		JBrowse link
G Syt11 synaptotagmin 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:1,246,768...1,266,418
Ensembl chrNW_004624885:1,246,719...1,266,420 		JBrowse link
G Syt13 synaptotagmin 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:3,073,269...3,121,172
Ensembl chrNW_004624767:3,073,168...3,122,183 		JBrowse link
G Syt17 synaptotagmin 17 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:2,459,992...2,594,007
Ensembl chrNW_004624782:2,512,174...2,593,877 		JBrowse link
G Syt2 synaptotagmin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:8,103,665...8,201,567
Ensembl chrNW_004624807:8,160,431...8,196,916 		JBrowse link
G Syt4 synaptotagmin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624779:17,593,760...17,603,217
Ensembl chrNW_004624779:17,592,669...17,603,403 		JBrowse link
G Syt5 synaptotagmin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:2,071,782...2,080,680
Ensembl chrNW_004624832:2,071,770...2,078,376 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:5707519|PMID:26738595) UniProt PMID:26738595 MGI:5707519 NCBI chrNW_004624926:722,201...765,834
Ensembl chrNW_004624926:722,224...765,033 		JBrowse link
G Syt8 synaptotagmin 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:14,673,307...14,733,984
Ensembl chrNW_004624767:14,731,508...14,733,893 		JBrowse link
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Doc2a double C2 domain alpha involved_in ISO PMID:22036572
(PMID:20150444)		 SynGO PMID:20150444 PMID:22036572 RGD:155230732 NCBI chrNW_004624782:13,217,553...13,221,763
Ensembl chrNW_004624782:13,217,736...13,221,457 		JBrowse link
G Doc2b double C2 domain beta involved_in ISO PMID:22036572
(PMID:20150444)		 SynGO PMID:20150444 PMID:22036572 RGD:155230732 NCBI chrNW_004624786:4,029,384...4,060,676
Ensembl chrNW_004624786:4,029,390...4,060,196 		JBrowse link
G Syt1 synaptotagmin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624750:18,774,670...19,313,932
Ensembl chrNW_004624750:18,774,570...18,989,659 		JBrowse link
G Syt2 synaptotagmin 2 involved_in ISO (PMID:17192432) SynGO PMID:17192432 NCBI chrNW_004624807:8,103,665...8,201,567
Ensembl chrNW_004624807:8,160,431...8,196,916 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (PMID:24267651) SynGO PMID:24267651 NCBI chrNW_004624926:722,201...765,834
Ensembl chrNW_004624926:722,224...765,033 		JBrowse link
G Syt9 synaptotagmin 9 involved_in ISO (PMID:17521570) SynGO PMID:17521570 NCBI chrNW_004624817:8,996,880...9,171,226
Ensembl chrNW_004624817:8,996,893...9,166,331 		JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Reps1 RALBP1 associated Eps domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:14,970,693...15,057,033
Ensembl chrNW_004624753:14,970,706...15,057,037 		JBrowse link
fast, calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt1 synaptotagmin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624750:18,774,670...19,313,932
Ensembl chrNW_004624750:18,774,570...18,989,659 		JBrowse link
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393), (MGI:3772418|PMID:18082964) CACAO PMID:16675393 PMID:18082964 MGI:3629385 MGI:3772418 NCBI chrNW_004624791:13,975,235...14,056,900 JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chrNW_004624885:1,246,768...1,266,418
Ensembl chrNW_004624885:1,246,719...1,266,420 		JBrowse link
negative regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:23616533) MGI PMID:23616533 NCBI chrNW_004624765:20,766,368...20,951,560
Ensembl chrNW_004624765:20,773,885...20,951,736 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO PMID:24709664 UniProt PMID:24709664 RGD:11059581 NCBI chrNW_004624883:645,524...681,705
Ensembl chrNW_004624883:645,449...682,292 		JBrowse link
G LOC101714409 ras-related protein Rap-1b involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624774:16,529,352...16,530,422 JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23616533) Ensembl
TreeGrafter
MGI		 PMID:23616533 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:7,340,152...7,425,218
Ensembl chrNW_004624772:7,368,653...7,424,938 		JBrowse link
G Rap1b RAP1B, member of RAS oncogene family acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23616533) MGI
TreeGrafter		 PMID:23616533 GO_REF:0000118 NCBI chrNW_004624948:623,527...664,044
Ensembl chrNW_004624948:623,527...664,000 		JBrowse link
G Syt4 synaptotagmin 4 involved_in ISO (MGI:4457852|PMID:19448629) SynGO-UCL PMID:19448629 MGI:4457852 NCBI chrNW_004624779:17,593,760...17,603,217
Ensembl chrNW_004624779:17,592,669...17,603,403 		JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 NCBI chrNW_004624896:2,726,622...2,774,671
Ensembl chrNW_004624896:2,723,462...2,800,113 		JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:5603022|PMID:24587181) ParkinsonsUK-UCL PMID:24587181 MGI:5603022 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911 		JBrowse link
neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc17a5 solute carrier family 17 member 5 involved_in ISO (PMID:18695252) SynGO PMID:18695252 NCBI chrNW_004624819:766,332...816,255
Ensembl chrNW_004624819:767,340...815,903 		JBrowse link
G Slc17a6 solute carrier family 17 member 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:13,335,186...13,376,634
Ensembl chrNW_004624766:13,335,130...13,376,712 		JBrowse link
G Slc17a7 solute carrier family 17 member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:4,765,233...4,775,515
Ensembl chrNW_004624832:4,765,212...4,775,515 		JBrowse link
G Slc17a8 solute carrier family 17 member 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:7,345,411...7,396,445
Ensembl chrNW_004624750:7,345,557...7,396,154 		JBrowse link
G Slc18a2 solute carrier family 18 member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:29,356,590...29,388,099
Ensembl chrNW_004624737:29,358,696...29,387,808 		JBrowse link
G Slc18a3 solute carrier family 18 member A3 involved_in ISO PMID:9182805
(PMID:4075114)		 SynGO PMID:4075114 PMID:9182805 RGD:13702424 NCBI chrNW_004624928:403,114...405,560
Ensembl chrNW_004624928:403,503...405,095 		JBrowse link
G Slc32a1 solute carrier family 32 member 1 involved_in ISO PMID:9349821 SynGO PMID:9349821 RGD:730037 NCBI chrNW_004624842:949,907...955,002
Ensembl chrNW_004624842:946,211...954,768 		JBrowse link
positive regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt1 synaptotagmin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624750:18,774,670...19,313,932
Ensembl chrNW_004624750:18,774,570...18,989,659 		JBrowse link
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Cdh2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chrNW_004624739:27,132,533...28,430,765
Ensembl chrNW_004624739:27,134,993...28,430,686 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:5284797 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nlgn2 neuroligin 2 involved_in ISO (MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:5284797 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) CACAO PMID:21808020 MGI:5286761 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:22851330 RGD:13506174 NCBI chrNW_004624845:3,875,601...3,990,347
Ensembl chrNW_004624845:3,891,061...3,990,342 		JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:22851330 RGD:13506174 NCBI chrNW_004624799:10,913,834...11,060,185
Ensembl chrNW_004624799:10,915,477...11,060,312 		JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937) UniProt PMID:33478937 MGI:6694370 NCBI chrNW_004624740:5,112,422...5,488,394
Ensembl chrNW_004624740:5,114,019...5,488,385 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chrNW_004624730:72,386,376...72,395,392 JBrowse link
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chrNW_004624760:6,605,902...6,646,575
Ensembl chrNW_004624760:6,604,787...6,646,622 		JBrowse link
G Dnm1l dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Mff mitochondrial fission factor involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624843:1,626,800...1,664,906 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:4355770|PMID:19628693) BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004624845:3,875,601...3,990,347
Ensembl chrNW_004624845:3,891,061...3,990,342 		JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chrNW_004624758:17,969,777...18,048,476
Ensembl chrNW_004624758:17,969,705...18,049,904 		JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chrNW_004624828:5,304,887...5,330,440
Ensembl chrNW_004624828:5,305,070...5,330,440 		JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004624799:10,913,834...11,060,185
Ensembl chrNW_004624799:10,915,477...11,060,312 		JBrowse link
G Tor1a torsin family 1 member A involved_in ISO (PMID:21102408) UniProt PMID:21102408 NCBI chrNW_004624760:5,602,011...5,606,784
Ensembl chrNW_004624760:5,601,943...5,606,162 		JBrowse link
positive regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Dnm1l dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:4355770|PMID:19628693) BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Slc4a8 solute carrier family 4 member 8 acts_upstream_of_or_within ISO (MGI:5013899|PMID:21593314) ARUK-UCL PMID:21593314 MGI:5013899 NCBI chrNW_004624816:714,766...821,340
Ensembl chrNW_004624816:738,237...822,140 		JBrowse link
positive regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Unc13b unc-13 homolog B involved_in ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chrNW_004624760:6,605,902...6,646,575
Ensembl chrNW_004624760:6,604,787...6,646,622 		JBrowse link
G Dnm3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chrNW_004624771:9,247,463...9,838,276
Ensembl chrNW_004624771:9,247,218...9,838,254 		JBrowse link
G Pclo piccolo presynaptic cytomatrix protein ISO RGD PMID:31074746 RGD:41408338 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Plaa phospholipase A2 activating protein involved_in ISO (MGI:5883825|PMID:28413018) UniProt PMID:28413018 MGI:5883825 NCBI chrNW_004624736:31,127,955...31,169,680
Ensembl chrNW_004624736:31,127,955...31,169,739 		JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator involved_in ISO (MGI:5634021|PMID:25719439)
(PMID:25719439)		 SynGO PMID:25719439 MGI:5634021 NCBI chrNW_004624888:2,985,966...3,443,542 JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:11,218,259...11,303,406
Ensembl chrNW_004624741:11,274,490...11,302,813 		JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in ISO (MGI:3621672|PMID:11545717) SynGO PMID:11545717 MGI:3621672 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484 		JBrowse link
G Syt10 synaptotagmin 10 involved_in ISO (PMID:28683263) SynGO PMID:28683263 NCBI chrNW_004624778:2,700,545...2,763,134 JBrowse link
G Unc13a unc-13 homolog A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:418,248...464,203 JBrowse link
G Unc13b unc-13 homolog B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:21106823) MGI PMID:21106823 NCBI chrNW_004624747:21,509,360...21,567,424
Ensembl chrNW_004624747:21,509,366...21,568,098 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (MGI:3652690|PMID:16782817) ParkinsonsUK-UCL PMID:16782817 MGI:3652690 NCBI chrNW_004624732:34,450,616...34,593,675
Ensembl chrNW_004624732:34,450,630...34,593,675 		JBrowse link
regulation of calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B involved_in ISO PMID:7832825 SynGO PMID:7832825 RGD:13792530 NCBI chrNW_004624760:78,754...257,901
Ensembl chrNW_004624760:81,236...257,787 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in ISO (PMID:25209271) SynGO PMID:25209271 NCBI chrNW_004624735:11,398,603...11,907,553
Ensembl chrNW_004624735:11,400,159...11,841,920 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in ISO (PMID:25209271) SynGO PMID:25209271 NCBI chrNW_004624822:756,532...1,806,129
Ensembl chrNW_004624822:756,550...1,807,175 		JBrowse link
G Prrt2 proline rich transmembrane protein 2 involved_in ISO (PMID:27052163) SynGO PMID:27052163 NCBI chrNW_004624782:13,390,347...13,393,775 JBrowse link
G Rimbp2 RIMS binding protein 2 involved_in ISO (PMID:27671655) SynGO PMID:27671655 NCBI chrNW_004624747:27,107,951...27,245,303
Ensembl chrNW_004624747:27,108,508...27,144,190 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in ISO (PMID:21241895) SynGO PMID:21241895 NCBI chrNW_004624763:20,027,601...20,567,288
Ensembl chrNW_004624763:20,027,574...20,567,688 		JBrowse link
regulation of neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc10a4 solute carrier family 10 member 4 involved_in ISO (PMID:25176177) SynGO PMID:25176177 NCBI chrNW_004624761:18,489,636...18,495,607
Ensembl chrNW_004624761:18,489,683...18,495,507 		JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx7 purinergic receptor P2X 7 involved_in ISO PMID:24037803 SynGO PMID:24037803 RGD:13702177 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISO PMID:14627637 SynGO PMID:14627637 RGD:8554199 NCBI chrNW_004624828:1,165,877...1,174,306
Ensembl chrNW_004624828:1,165,327...1,174,417 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO (PMID:31679900) SynGO PMID:31679900 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Unc13b unc-13 homolog B involved_in ISO PMID:31679900 SynGO PMID:31679900 RGD:155230690 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624893:753,111...778,563
Ensembl chrNW_004624893:753,111...778,539 		JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chrNW_004624786:9,903,176...9,908,953
Ensembl chrNW_004624786:9,902,509...9,909,684 		JBrowse link
regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (PMID:23684785) MGI PMID:23684785 NCBI chrNW_004624748:18,958,250...19,056,278
Ensembl chrNW_004624748:18,958,276...19,054,381 		JBrowse link
regulation of synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgdia Rho GDP dissociation inhibitor alpha involved_in ISO (PMID:18829665) SynGO PMID:18829665 NCBI chrNW_004624801:10,719,987...10,723,263
Ensembl chrNW_004624801:10,717,133...10,722,840 		JBrowse link
G Bsn bassoon presynaptic cytomatrix protein involved_in ISO (PMID:21092860) SynGO PMID:21092860 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450 		JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:31,737,606...31,787,900
Ensembl chrNW_004624736:31,751,268...31,788,253 		JBrowse link
G Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 involved_in ISO PMID:24254883 SynGO PMID:24254883 RGD:13702178 NCBI chrNW_004624875:538,752...542,874
Ensembl chrNW_004624875:538,790...543,044 		JBrowse link
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:29,515,338...29,562,619
Ensembl chrNW_004624741:29,515,298...29,562,617 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 involved_in ISO PMID:25996636 SynGO PMID:25996636 RGD:155230734 NCBI chrNW_004624758:518,070...668,915
Ensembl chrNW_004624758:519,249...669,471 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:19822762) SynGO PMID:19822762 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Pld1 phospholipase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:49,665,432...49,885,242
Ensembl chrNW_004624730:49,665,432...49,885,184 		JBrowse link
G Pls3 plastin 3 involved_in ISO (PMID:23263861) SynGO PMID:23263861 NCBI chrNW_004624940:120,073...216,522
Ensembl chrNW_004624940:120,073...216,622 		JBrowse link
G Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha involved_in ISO (PMID:23825400) SynGO PMID:23825400 NCBI chrNW_004624762:5,087,726...5,156,526
Ensembl chrNW_004624762:5,087,705...5,156,922 		JBrowse link
G Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:26,202,882...26,315,987
Ensembl chrNW_004624740:26,202,375...26,315,352 		JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:17088253) SynGO PMID:17088253 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743 		JBrowse link
G Rab3b RAB3B, member RAS oncogene family involved_in ISO (PMID:20007772) SynGO PMID:20007772 NCBI chrNW_004624859:1,184,733...1,250,402
Ensembl chrNW_004624859:1,193,503...1,249,972 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in ISO (PMID:25904804) SynGO PMID:25904804 NCBI chrNW_004624787:10,062,677...10,369,132
Ensembl chrNW_004624787:10,062,717...10,369,632 		JBrowse link
G Scrn1 secernin 1 involved_in ISO PMID:31441084 SynGO PMID:31441084 RGD:155230704 NCBI chrNW_004624739:802,642...939,884
Ensembl chrNW_004624739:802,425...866,982 		JBrowse link
G Snap29 synaptosome associated protein 29 involved_in ISO PMID:15890653 SynGO PMID:15890653 RGD:13702146 NCBI chrNW_004624945:799,831...837,720
Ensembl chrNW_004624945:801,833...837,564 		JBrowse link
G Syn1 synapsin I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624978:110,640...179,910
Ensembl chrNW_004624978:110,506...180,568 		JBrowse link
regulation of synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2a calcium/calmodulin dependent protein kinase II alpha involved_in ISO (PMID:17660813) SynGO PMID:17660813 NCBI chrNW_004624774:9,526,323...9,585,647
Ensembl chrNW_004624774:9,526,323...9,585,649 		JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512 		JBrowse link
G Actg1 actin gamma 1 involved_in ISO (PMID:27840001) SynGO PMID:27840001 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637 		JBrowse link
G Arpc3 actin related protein 2/3 complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:21,438,602...21,451,154
Ensembl chrNW_004624747:21,438,612...21,454,753 		JBrowse link
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO (PMID:22536397) MGI PMID:22536397 NCBI chrNW_004624754:19,562,532...20,014,323
Ensembl chrNW_004624754:19,616,547...20,011,989 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624832:6,957,775...6,966,505
Ensembl chrNW_004624832:6,958,820...6,966,514 		JBrowse link
G Cxadr CXADR Ig-like cell adhesion molecule involved_in ISO (PMID:31043663) SynGO PMID:31043663 NCBI chrNW_004624745:5,900,933...5,954,584
Ensembl chrNW_004624745:5,900,886...5,958,765 		JBrowse link
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:26748701) SynGO PMID:26748701 NCBI chrNW_004624755:26,179,099...26,197,764
Ensembl chrNW_004624755:26,179,162...26,189,901 		JBrowse link
G Dnm1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chrNW_004624760:6,605,902...6,646,575
Ensembl chrNW_004624760:6,604,787...6,646,622 		JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 involved_in ISO (PMID:33508244) SynGO PMID:33508244 NCBI chrNW_004624832:4,161,510...4,175,744
Ensembl chrNW_004624832:4,161,068...4,175,721 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:25501810) SynGO PMID:25501810 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Mylk myosin light chain kinase involved_in ISO PMID:27062289 SynGO PMID:27062289 RGD:405650266 NCBI chrNW_004624912:1,952,053...2,213,196
Ensembl chrNW_004624912:1,953,838...2,172,561 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO PMID:19481455 SynGO PMID:19481455 RGD:155230799 NCBI chrNW_004624891:1,907,233...2,429,714
Ensembl chrNW_004624891:1,908,044...2,425,144 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:29386384) SynGO PMID:29386384 NCBI chrNW_004624818:3,900,917...3,915,457
Ensembl chrNW_004624818:3,900,917...3,911,042 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004624845:3,875,601...3,990,347
Ensembl chrNW_004624845:3,891,061...3,990,342 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (PMID:15386003) SynGO PMID:15386003 NCBI chrNW_004624828:6,324,156...6,369,394 JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in ISO (PMID:20810903) SynGO PMID:20810903 NCBI chrNW_004624754:7,045,532...7,097,658
Ensembl chrNW_004624754:7,045,532...7,097,652 		JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma involved_in ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chrNW_004624758:17,969,777...18,048,476
Ensembl chrNW_004624758:17,969,705...18,049,904 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:29311685) SynGO PMID:29311685 NCBI chrNW_004624855:430,148...1,992,121
Ensembl chrNW_004624855:430,260...1,989,747 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (PMID:34269176) SynGO PMID:34269176 NCBI chrNW_004624740:30,912,841...30,933,882
Ensembl chrNW_004624740:30,911,598...30,934,025 		JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chrNW_004624770:10,592,304...10,731,640 JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chrNW_004624894:152,064...170,637 JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chrNW_004624828:5,304,887...5,330,440
Ensembl chrNW_004624828:5,305,070...5,330,440 		JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chrNW_004624832:4,765,233...4,775,515
Ensembl chrNW_004624832:4,765,212...4,775,515 		JBrowse link
G Snap91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chrNW_004624799:10,913,834...11,060,185
Ensembl chrNW_004624799:10,915,477...11,060,312 		JBrowse link
G Snx9 sorting nexin 9 involved_in ISO PMID:17681954 SynGO PMID:17681954 RGD:155230781 NCBI chrNW_004624785:283,886...374,740
Ensembl chrNW_004624785:282,512...374,378 		JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO (PMID:29311685) SynGO PMID:29311685 NCBI chrNW_004624885:1,246,768...1,266,418
Ensembl chrNW_004624885:1,246,719...1,266,420 		JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO PMID:14532108 SynGO PMID:14532108 RGD:155230716 NCBI chrNW_004624926:722,201...765,834
Ensembl chrNW_004624926:722,224...765,033 		JBrowse link
G Vamp4 vesicle associated membrane protein 4 involved_in ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chrNW_004624771:9,986,835...10,034,112 JBrowse link
regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1e calcium voltage-gated channel subunit alpha1 E involved_in ISO PMID:19193890 SynGO PMID:19193890 RGD:13792544 NCBI chrNW_004624771:1,554,875...2,047,597
Ensembl chrNW_004624771:1,733,215...2,039,784 		JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in ISO (PMID:10322048) SynGO PMID:10322048 NCBI chrNW_004624866:4,973,087...5,287,477
Ensembl chrNW_004624866:4,973,207...5,281,746 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624832:6,957,775...6,966,505
Ensembl chrNW_004624832:6,958,820...6,966,514 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:13,723,347...14,106,844
Ensembl chrNW_004624762:13,722,691...14,106,844 		JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 involved_in ISO (PMID:15848802) SynGO PMID:15848802 NCBI chrNW_004624730:73,860,578...73,871,515
Ensembl chrNW_004624730:73,861,847...73,873,521 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:10,810,368...10,932,801
Ensembl chrNW_004624756:10,810,413...10,942,034 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:26400647) SynGO PMID:26400647 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725 		JBrowse link
G Fbxl20 F-box and leucine rich repeat protein 20 involved_in ISO (PMID:17803915) SynGO PMID:17803915 NCBI chrNW_004624795:3,606,791...3,696,944
Ensembl chrNW_004624795:3,607,567...3,691,684 		JBrowse link
G Fbxo45 F-box protein 45 involved_in ISO (PMID:19996097) SynGO PMID:19996097 NCBI chrNW_004624730:61,667,177...61,684,162 JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (PMID:26637799) SynGO PMID:26637799 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910 		JBrowse link
G Git2 GIT ArfGAP 2 involved_in ISO (PMID:26637799) SynGO PMID:26637799 NCBI chrNW_004624747:10,518,651...10,580,179
Ensembl chrNW_004624747:10,518,671...10,580,179 		JBrowse link
G Gpr151 G protein-coupled receptor 151 involved_in ISO (PMID:32098843) SynGO PMID:32098843 NCBI chrNW_004624774:5,994,386...5,995,875 JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B involved_in ISO PMID:17067296 SynGO PMID:17067296 RGD:13702319 NCBI chrNW_004624819:4,425,271...4,429,165
Ensembl chrNW_004624819:4,427,827...4,428,999 		JBrowse link
G Htr1d 5-hydroxytryptamine receptor 1D involved_in ISO PMID:8522955 SynGO PMID:8522955 RGD:155230787 NCBI chrNW_004624764:7,854,576...7,874,874
Ensembl chrNW_004624764:7,855,472...7,856,602 		JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 involved_in ISO (PMID:25556795) SynGO PMID:25556795 NCBI chrNW_004624807:1,019,347...1,392,433
Ensembl chrNW_004624807:1,056,313...1,388,491 		JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in ISO (PMID:23949442) ParkinsonsUK-UCL PMID:23949442 NCBI chrNW_004624778:106,594...279,325
Ensembl chrNW_004624778:108,761...279,230 		JBrowse link
G Ncs1 neuronal calcium sensor 1 involved_in ISO PMID:12947410 SynGO PMID:12947410 RGD:13702435 NCBI chrNW_004624760:5,374,211...5,410,550
Ensembl chrNW_004624760:5,376,634...5,410,473 		JBrowse link
G Npy neuropeptide Y involved_in ISO PMID:16026936 SynGO PMID:16026936 RGD:155230755 NCBI chrNW_004624739:6,277,704...6,285,454
Ensembl chrNW_004624739:6,277,612...6,285,397 		JBrowse link
G Npy1r neuropeptide Y receptor Y1 involved_in ISO PMID:16026936 SynGO PMID:16026936 RGD:155230755 NCBI chrNW_004624758:13,542,467...13,545,106
Ensembl chrNW_004624758:13,536,493...13,545,599 		JBrowse link
G P2rx1 purinergic receptor P2X 1 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004624786:6,503,367...6,520,802
Ensembl chrNW_004624786:6,504,250...6,521,821 		JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004624747:28,019,305...28,023,558
Ensembl chrNW_004624747:28,020,652...28,023,392 		JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004624730:30,470,894...30,478,269
Ensembl chrNW_004624730:30,471,610...30,476,941 		JBrowse link
G P2ry2 purinergic receptor P2Y2 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004624817:3,706,017...3,721,045
Ensembl chrNW_004624817:3,706,017...3,719,649 		JBrowse link
G P2ry4 pyrimidinergic receptor P2Y4 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chrNW_004624903:221,985...257,903
Ensembl chrNW_004624903:223,520...259,111 		JBrowse link
G Pfn2 profilin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17541406) Ensembl
MGI		 PMID:17541406 GO_REF:0000107 NCBI chrNW_004624730:27,306,452...27,312,493
Ensembl chrNW_004624730:27,307,030...27,312,501 		JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in ISO PMID:23751498 SynGO PMID:23751498 RGD:13702233 NCBI chrNW_004624837:627,484...1,116,597
Ensembl chrNW_004624837:629,302...1,111,081 		JBrowse link
G Prepl prolyl endopeptidase like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624738:25,802,156...25,835,663
Ensembl chrNW_004624738:25,802,793...25,834,762 		JBrowse link
G Prkca protein kinase C alpha involved_in ISO (PMID:21658591) SynGO PMID:21658591 NCBI chrNW_004624870:1,589,775...2,023,160
Ensembl chrNW_004624870:1,596,102...2,023,172 		JBrowse link
G Prkcb protein kinase C beta involved_in ISO (PMID:21658591) SynGO PMID:21658591 NCBI chrNW_004624782:8,974,995...9,287,609
Ensembl chrNW_004624782:8,974,765...9,287,702 		JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (PMID:24794094) SynGO PMID:24794094 NCBI chrNW_004624832:2,548,286...2,566,365
Ensembl chrNW_004624832:2,547,535...2,566,402 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:16141272) ParkinsonsUK-UCL PMID:16141272 NCBI chrNW_004624821:5,271,246...5,311,469 JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624763:20,027,601...20,567,288
Ensembl chrNW_004624763:20,027,574...20,567,688 		JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:20452978 MGI
TreeGrafter		 PMID:20452978 GO_REF:0000118 RGD:8554325 NCBI chrNW_004624892:83,904...122,978
Ensembl chrNW_004624892:89,691...123,037 		JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:20452978 MGI
TreeGrafter		 PMID:20452978 GO_REF:0000118 RGD:8554325 NCBI chrNW_004624790:9,654,266...9,720,522
Ensembl chrNW_004624790:9,658,850...9,721,084 		JBrowse link
G Slc4a8 solute carrier family 4 member 8 involved_in ISO (PMID:21593314) SynGO PMID:21593314 NCBI chrNW_004624816:714,766...821,340
Ensembl chrNW_004624816:738,237...822,140 		JBrowse link
G Snap29 synaptosome associated protein 29 involved_in ISO PMID:11707603 SynGO PMID:11707603 RGD:155230727 NCBI chrNW_004624945:799,831...837,720
Ensembl chrNW_004624945:801,833...837,564 		JBrowse link
G Snapin SNAP associated protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624885:3,490,321...3,491,963
Ensembl chrNW_004624885:3,490,321...3,491,946 		JBrowse link
G Stxbp5 syntaxin binding protein 5 involved_in ISO (PMID:18936251) SynGO PMID:18936251 NCBI chrNW_004624785:10,692,573...10,874,358
Ensembl chrNW_004624785:10,692,257...10,874,285 		JBrowse link
G Stxbp5l syntaxin binding protein 5L involved_in ISO (PMID:24744148) SynGO PMID:24744148 NCBI chrNW_004624731:26,815,873...27,305,344
Ensembl chrNW_004624731:26,820,018...27,305,447 		JBrowse link
G Sv2b synaptic vesicle glycoprotein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624768:12,426,232...12,621,852
Ensembl chrNW_004624768:12,425,890...12,509,901 		JBrowse link
G Sv2c synaptic vesicle glycoprotein 2C involved_in ISO (PMID:28246328) SynGO PMID:28246328 NCBI chrNW_004624869:611,873...838,014
Ensembl chrNW_004624869:669,391...831,138 		JBrowse link
G Syn1 synapsin I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624978:110,640...179,910
Ensembl chrNW_004624978:110,506...180,568 		JBrowse link
G Syt1 synaptotagmin 1 involved_in ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chrNW_004624750:18,774,670...19,313,932
Ensembl chrNW_004624750:18,774,570...18,989,659 		JBrowse link
G Tprg1l tumor protein p63 regulated 1 like involved_in ISO PMID:26212709 SynGO PMID:26212709 RGD:13792549 NCBI chrNW_004624818:6,850,479...6,857,979
Ensembl chrNW_004624818:6,850,486...6,858,136 		JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:17027648) SynGO PMID:17027648 NCBI chrNW_004624804:8,148,920...8,157,552
Ensembl chrNW_004624804:8,148,180...8,157,552 		JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (PMID:26400647) SynGO PMID:26400647 NCBI chrNW_004624796:12,431,310...12,472,303
Ensembl chrNW_004624796:12,431,959...12,472,303 		JBrowse link
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:26,265,590...26,286,203
Ensembl chrNW_004624755:26,266,614...26,288,079 		JBrowse link
G Cplx2 complexin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:14,085,085...14,170,711
Ensembl chrNW_004624733:14,089,018...14,097,508 		JBrowse link
G Cplx3 complexin 3 involved_in ISO (PMID:27239031) SynGO PMID:27239031 NCBI chrNW_004624894:42,204...49,875
Ensembl chrNW_004624894:45,093...49,923 		JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 acts_upstream_of_or_within ISO (PMID:12533602) MGI PMID:12533602 NCBI chrNW_004624907:653,568...711,358
Ensembl chrNW_004624907:653,895...710,791 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11359932) MGI
TreeGrafter		 PMID:11359932 GO_REF:0000118 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Vamp1 vesicle associated membrane protein 1 involved_in ISO (PMID:21282288) SynGO PMID:21282288 NCBI chrNW_004624860:3,212,549...3,219,354
Ensembl chrNW_004624860:3,213,474...3,219,359 		JBrowse link
regulation of synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a6 solute carrier family 9 member A6 involved_in ISO PMID:33372133 SynGO PMID:33372133 RGD:405650253 NCBI chrNW_004624808:11,107,125...11,157,913 JBrowse link
regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 involved_in ISO PMID:16630837 SynGO PMID:16630837 RGD:8553864 NCBI chrNW_004624832:1,975,448...1,995,102
Ensembl chrNW_004624832:1,975,314...1,995,056 		JBrowse link
G Napa NSF attachment protein alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21040848) MGI
TreeGrafter		 PMID:21040848 GO_REF:0000118 NCBI chrNW_004624832:6,301,251...6,323,445 JBrowse link
G Napb NSF attachment protein beta acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21040848) MGI
TreeGrafter		 PMID:21040848 GO_REF:0000118 NCBI chrNW_004624741:23,046,856...23,085,234
Ensembl chrNW_004624741:23,046,779...23,085,229 		JBrowse link
G Osbpl2 oxysterol binding protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:28,099,384...28,145,179
Ensembl chrNW_004624741:28,116,827...28,144,263 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Stx1a syntaxin 1A involved_in ISO (MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:5521403 NCBI chrNW_004624740:14,104,033...14,120,133
Ensembl chrNW_004624740:14,104,050...14,120,133 		JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:5521403 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911 		JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in ISO PMID:21689256 UniProt
RGD		 PMID:19255244 PMID:21689256 RGD:14390056 RGD:2311128 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484 		JBrowse link
G Stxbp5 syntaxin binding protein 5 involved_in ISO (PMID:18936251) SynGO PMID:18936251 NCBI chrNW_004624785:10,692,573...10,874,358
Ensembl chrNW_004624785:10,692,257...10,874,285 		JBrowse link
G Syngr3 synaptogyrin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624913:266,296...270,420
Ensembl chrNW_004624913:265,316...270,491 		JBrowse link
G Syp synaptophysin involved_in ISO (PMID:31090538) SynGO PMID:31090538 NCBI chrNW_004624893:929,460...942,806
Ensembl chrNW_004624893:928,099...942,903 		JBrowse link
G Unc13a unc-13 homolog A involved_in ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chrNW_004624908:418,248...464,203 JBrowse link
regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf14 fibroblast growth factor 14 acts_upstream_of_or_within ISO PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chrNW_004624793:9,021,538...9,641,651
Ensembl chrNW_004624793:9,021,579...9,638,740 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649 		JBrowse link
spontaneous exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO PMID:17190793 UniProt PMID:17190793 RGD:10047304 NCBI chrNW_004624901:1,319,426...1,336,848
Ensembl chrNW_004624901:1,319,062...1,336,744 		JBrowse link
G Syt12 synaptotagmin 12 involved_in ISO PMID:17190793 GO_Central PMID:17190793 RGD:10047304 NCBI chrNW_004624767:19,412,314...19,436,939
Ensembl chrNW_004624767:19,412,359...19,436,931 		JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO PMID:22539861 SynGO PMID:22539861 RGD:12050120 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (PMID:20203623) SynGO PMID:20203623 NCBI chrNW_004624829:608,065...637,096
Ensembl chrNW_004624829:608,065...634,479 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:6,710,081...6,750,315
Ensembl chrNW_004624828:6,710,025...6,749,434 		JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chrNW_004624760:6,605,902...6,646,575
Ensembl chrNW_004624760:6,604,787...6,646,622 		JBrowse link
G Dnm3 dynamin 3 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chrNW_004624771:9,247,463...9,838,276
Ensembl chrNW_004624771:9,247,218...9,838,254 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624845:3,875,601...3,990,347
Ensembl chrNW_004624845:3,891,061...3,990,342 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624799:10,913,834...11,060,185
Ensembl chrNW_004624799:10,915,477...11,060,312 		JBrowse link
synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon presynaptic cytomatrix protein involved_in ISO (PMID:20332206) SynGO PMID:20332206 NCBI chrNW_004624730:3,498,118...3,600,488
Ensembl chrNW_004624730:3,498,257...3,593,450 		JBrowse link
G Cdh2 cadherin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:4,333,643...4,540,817
Ensembl chrNW_004624770:4,334,202...4,545,470 		JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO (PMID:32075774) SynGO PMID:32075774 NCBI chrNW_004624755:25,998,524...26,021,223
Ensembl chrNW_004624755:25,999,713...26,021,331 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624730:77,876,361...77,887,228
Ensembl chrNW_004624730:77,875,257...77,887,234 		JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:20534458
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652)
PMID:19628693		 BHF-UCL PMID:10892652 PMID:12796785 PMID:19628693 PMID:20534458 MGI:2665153 MGI:3694190 RGD:10047242 RGD:8554760 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chrNW_004624738:31,134,551...32,273,596
Ensembl chrNW_004624738:31,133,346...32,273,565 		JBrowse link
G Pclo piccolo presynaptic cytomatrix protein involved_in ISO (PMID:20332206) SynGO PMID:20332206 NCBI chrNW_004624739:31,143,872...31,448,524 JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO (MGI:4830800|PMID:20338242) UniProt PMID:20338242 MGI:4830800 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Syn1 synapsin I involved_in ISO (MGI:76610|PMID:7568108) SynGO PMID:7568108 MGI:76610 NCBI chrNW_004624978:110,640...179,910
Ensembl chrNW_004624978:110,506...180,568 		JBrowse link
G Syn2 synapsin II involved_in ISO (PMID:18945891)
(MGI:4830800|PMID:20338242), (PMID:18945891)		 SynGO PMID:18945891 PMID:20338242 MGI:4830800 NCBI chrNW_004624956:302,239...467,319
Ensembl chrNW_004624956:303,011...349,857 		JBrowse link
G Syn3 synapsin III involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624750:1,663,309...1,976,738
Ensembl chrNW_004624750:1,699,107...1,972,252 		JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624939:560,192...698,100
Ensembl chrNW_004624939:560,106...661,570 		JBrowse link
synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbp2 C-terminal binding protein 2 involved_in ISO (PMID:26929012) SynGO PMID:26929012 NCBI chrNW_004624737:22,135,046...22,166,580
Ensembl chrNW_004624737:22,003,871...22,165,257 		JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 involved_in ISO (PMID:29439199) SynGO PMID:29439199 NCBI chrNW_004624832:4,941,760...4,964,615
Ensembl chrNW_004624832:4,941,766...4,964,602 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in ISO (PMID:21241895) SynGO PMID:21241895 NCBI chrNW_004624763:20,027,601...20,567,288
Ensembl chrNW_004624763:20,027,574...20,567,688 		JBrowse link
G Stx1a syntaxin 1A involved_in ISO PMID:1321498 UniProt PMID:1321498 RGD:8553325 NCBI chrNW_004624740:14,104,033...14,120,133
Ensembl chrNW_004624740:14,104,050...14,120,133 		JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:5521403|PMID:24133272)
(MGI:5603022|PMID:24587181)		 ParkinsonsUK-UCL PMID:24133272 PMID:24587181 MGI:5521403 MGI:5603022 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911 		JBrowse link
G Stx4 syntaxin 4 ISO RGD PMID:7690687 RGD:68313 NCBI chrNW_004624782:14,094,727...14,101,210
Ensembl chrNW_004624782:14,090,850...14,105,058 		JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (PMID:23791195) MGI PMID:23791195 NCBI chrNW_004624901:2,191,219...2,197,786
Ensembl chrNW_004624901:2,191,241...2,197,877 		JBrowse link
G Tprg1l tumor protein p63 regulated 1 like acts_upstream_of_or_within ISO (PMID:33431696) MGI PMID:33431696 NCBI chrNW_004624818:6,850,479...6,857,979
Ensembl chrNW_004624818:6,850,486...6,858,136 		JBrowse link
G Unc13a unc-13 homolog A acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19558619) MGI
TreeGrafter		 PMID:19558619 GO_REF:0000118 NCBI chrNW_004624908:418,248...464,203 JBrowse link
G Unc13b unc-13 homolog B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19558619) MGI
TreeGrafter		 PMID:19558619 GO_REF:0000118 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 involved_in ISO (PMID:25374362) SynGO PMID:25374362 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649 		JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amph amphiphysin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11879655) MGI
TreeGrafter		 PMID:11879655 GO_REF:0000118 NCBI chrNW_004624740:22,399,302...22,615,736
Ensembl chrNW_004624740:22,399,244...22,614,608 		JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in ISO PMID:27534442 SynGO PMID:27534442 RGD:152025525 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 involved_in ISO (PMID:35014951) SynGO PMID:35014951 NCBI chrNW_004624832:4,513,977...4,540,080
Ensembl chrNW_004624832:4,513,977...4,540,277 		JBrowse link
G Ap2a2 adaptor related protein complex 2 subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624766:21,568,217...21,616,389
Ensembl chrNW_004624766:21,567,050...21,616,392 		JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in ISO (PMID:11102472) SynGO PMID:11102472 NCBI chrNW_004624875:3,085,518...3,206,930
Ensembl chrNW_004624875:3,090,656...3,208,593 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in ISO PMID:19321783
(PMID:11102472)		 SynGO PMID:11102472 PMID:19321783 RGD:12050109 NCBI chrNW_004624730:72,386,376...72,395,392 JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 involved_in ISO (PMID:11102472) SynGO PMID:11102472 NCBI chrNW_004624832:6,788,149...6,797,026
Ensembl chrNW_004624832:6,787,149...6,797,131 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in ISO (PMID:24133283) SynGO PMID:24133283 NCBI chrNW_004624768:18,476,562...18,507,933
Ensembl chrNW_004624768:18,476,447...18,507,998 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in ISO (PMID:15492041) SynGO PMID:15492041 NCBI chrNW_004624780:1,054,796...1,091,688
Ensembl chrNW_004624780:1,068,498...1,086,551 		JBrowse link
G Arf6 ADP ribosylation factor 6 involved_in ISO PMID:26731518 SynGO PMID:26731518 RGD:11556875 NCBI chrNW_004624731:18,880,065...18,883,456
Ensembl chrNW_004624731:18,882,690...18,883,217 		JBrowse link
G Atp8a1 ATPase phospholipid transporting 8A1 involved_in ISO (PMID:37723322) SynGO PMID:37723322 NCBI chrNW_004624761:24,285,317...24,508,837
Ensembl chrNW_004624761:24,285,280...24,508,915 		JBrowse link
G Bin1 bridging integrator 1 involved_in ISO PMID:9348539
(PMID:11879655)		 SynGO PMID:9348539 PMID:11879655 RGD:631926 NCBI chrNW_004624732:13,543,975...13,592,942
Ensembl chrNW_004624732:13,544,507...13,592,795 		JBrowse link
G Bltp1 bridge-like lipid transfer protein family member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624777:2,560,296...2,806,083
Ensembl chrNW_004624777:2,560,389...2,806,479 		JBrowse link
G Canx calnexin involved_in ISO (PMID:21747946) SynGO PMID:21747946 NCBI chrNW_004624733:42,588,680...42,616,624 JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO (PMID:16606832) MGI PMID:16606832 NCBI chrNW_004624780:15,287,426...15,292,292
Ensembl chrNW_004624780:15,287,433...15,292,292 		JBrowse link
G Cdk5 cyclin dependent kinase 5 ISO RGD PMID:12855954 RGD:1358501 NCBI chrNW_004624800:5,562,468...5,566,458
Ensembl chrNW_004624800:5,562,462...5,569,937 		JBrowse link
G Clta clathrin light chain A involved_in ISO PMID:14985443 SynGO PMID:14985443 RGD:2301373 NCBI chrNW_004624868:4,419,554...4,443,475
Ensembl chrNW_004624868:4,419,554...4,443,477 		JBrowse link
G Cltb clathrin light chain B involved_in ISO PMID:14985443 SynGO PMID:14985443 RGD:2301373 NCBI chrNW_004624733:13,707,594...13,738,814
Ensembl chrNW_004624733:13,707,155...13,738,814 		JBrowse link
G Cltc clathrin heavy chain involved_in ISO PMID:16982422 SynGO PMID:16982422 RGD:13702168 NCBI chrNW_004624871:1,439,975...1,507,514
Ensembl chrNW_004624871:1,439,838...1,510,911 		JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO (PMID:32075774) SynGO PMID:32075774 NCBI chrNW_004624755:25,998,524...26,021,223
Ensembl chrNW_004624755:25,999,713...26,021,331 		JBrowse link
G Dennd1a DENN domain containing 1A acts_upstream_of_or_within ISO (PMID:17182770) MGI PMID:17182770 NCBI chrNW_004624760:11,043,099...11,576,600
Ensembl chrNW_004624760:11,043,348...11,575,531 		JBrowse link
G Diaph1 diaphanous related formin 1 involved_in ISO (PMID:28231467) SynGO PMID:28231467 NCBI chrNW_004624774:738,717...845,187
Ensembl chrNW_004624774:739,206...845,272 		JBrowse link
G Dnm1 dynamin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:6,605,902...6,646,575
Ensembl chrNW_004624760:6,604,787...6,646,622 		JBrowse link
G Dnm1l dynamin 1 like involved_in ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Dnm2 dynamin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:2,727,136...2,805,248
Ensembl chrNW_004624828:2,727,112...2,807,319 		JBrowse link
G Dnm3 dynamin 3 involved_in ISO (PMID:21689597) SynGO PMID:21689597 NCBI chrNW_004624771:9,247,463...9,838,276
Ensembl chrNW_004624771:9,247,218...9,838,254 		JBrowse link
G Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 involved_in ISO (PMID:30692166) SynGO PMID:30692166 NCBI chrNW_004624908:965,948...1,014,235
Ensembl chrNW_004624908:966,087...1,014,130 		JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624905:2,027,709...2,139,312
Ensembl chrNW_004624905:2,029,808...2,140,721 		JBrowse link
G Grn granulin precursor ISO RGD PMID:21813674 RGD:5509044 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Itsn1 intersectin 1 involved_in ISO (PMID:18676989) SynGO PMID:18676989 NCBI chrNW_004624745:21,847,593...22,055,141
Ensembl chrNW_004624745:21,906,187...22,050,822 		JBrowse link
G Nlgn1 neuroligin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:10,019,307...10,034,624
Ensembl chrNW_004624786:10,022,717...10,034,624 		JBrowse link
G Nlgn3 neuroligin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624903:1,437,663...1,465,955
Ensembl chrNW_004624903:1,438,428...1,463,172 		JBrowse link
G Ophn1 oligophrenin 1 acts_upstream_of_or_within ISO (PMID:19481455) MGI PMID:19481455 NCBI chrNW_004624891:1,907,233...2,429,714
Ensembl chrNW_004624891:1,908,044...2,425,144 		JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in ISO (PMID:21926968) SynGO PMID:21926968 NCBI chrNW_004624754:22,723,479...22,762,262
Ensembl chrNW_004624754:22,723,317...22,734,344 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chrNW_004624845:3,875,601...3,990,347
Ensembl chrNW_004624845:3,891,061...3,990,342 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in ISO (PMID:35318705) SynGO PMID:35318705 NCBI chrNW_004624779:16,307,875...16,435,567
Ensembl chrNW_004624779:16,307,800...16,434,169 		JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chrNW_004624792:166,846...368,906
Ensembl chrNW_004624792:307,608...363,568 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO PMID:20956291 SynGO PMID:20956291 RGD:155230772 NCBI chrNW_004624821:5,271,246...5,311,469 JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (PMID:19458197) SynGO PMID:19458197 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533 		JBrowse link
G Sgip1 SH3GL interacting endocytic adaptor 1 involved_in ISO (PMID:31053155) SynGO PMID:31053155 NCBI chrNW_004624742:28,245,140...28,439,705
Ensembl chrNW_004624742:28,247,127...28,439,482 		JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in
acts_upstream_of_or_within		 ISO PMID:22099461
(PMID:19481455)		 SynGO
MGI		 PMID:19481455 PMID:22099461 RGD:13702445 NCBI chrNW_004624736:21,554,950...21,715,522
Ensembl chrNW_004624736:21,554,969...21,716,877 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chrNW_004624799:10,913,834...11,060,185
Ensembl chrNW_004624799:10,915,477...11,060,312 		JBrowse link
G Snca synuclein alpha involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Sncb synuclein beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624733:13,506,181...13,513,979
Ensembl chrNW_004624733:13,506,180...13,513,712 		JBrowse link
G Sncg synuclein gamma involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624841:192,396...196,568
Ensembl chrNW_004624841:192,398...196,064 		JBrowse link
G Ston1 stonin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:29,747,179...29,803,676
Ensembl chrNW_004624738:29,785,501...29,803,752 		JBrowse link
G Ston2 stonin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624734:20,618,244...20,770,266
Ensembl chrNW_004624734:20,657,303...20,763,692 		JBrowse link
G Stx1a syntaxin 1A involved_in ISO (PMID:26635000) UniProt PMID:26635000 NCBI chrNW_004624740:14,104,033...14,120,133
Ensembl chrNW_004624740:14,104,050...14,120,133 		JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18093523) MGI
TreeGrafter		 PMID:18093523 GO_REF:0000118 NCBI chrNW_004624745:20,881,312...20,984,242
Ensembl chrNW_004624745:20,881,317...20,984,184 		JBrowse link
G Synj2 synaptojanin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624785:157,455...265,926
Ensembl chrNW_004624785:145,228...266,022 		JBrowse link
G Syp synaptophysin involved_in ISO (MGI:5141572|PMID:21658579) SynGO PMID:21658579 MGI:5141572 NCBI chrNW_004624893:929,460...942,806
Ensembl chrNW_004624893:928,099...942,903 		JBrowse link
G Syt1 synaptotagmin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624750:18,774,670...19,313,932
Ensembl chrNW_004624750:18,774,570...18,989,659 		JBrowse link
G Syt17 synaptotagmin 17 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:2,459,992...2,594,007
Ensembl chrNW_004624782:2,512,174...2,593,877 		JBrowse link
G Syt2 synaptotagmin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:8,103,665...8,201,567
Ensembl chrNW_004624807:8,160,431...8,196,916 		JBrowse link
G Syt5 synaptotagmin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624832:2,071,782...2,080,680
Ensembl chrNW_004624832:2,071,770...2,078,376 		JBrowse link
G Syt8 synaptotagmin 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:14,673,307...14,733,984
Ensembl chrNW_004624767:14,731,508...14,733,893 		JBrowse link
G Tbc1d24 TBC1 domain family member 24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30335140) Ensembl
MGI		 PMID:30335140 GO_REF:0000107 NCBI chrNW_004624824:245,717...251,603
Ensembl chrNW_004624824:243,939...254,249 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 involved_in ISO (MGI:3573806|PMID:15475946) UniProt PMID:15475946 MGI:3573806 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649 		JBrowse link
synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of ISO (PMID:23616533) MGI PMID:23616533 NCBI chrNW_004624765:20,766,368...20,951,560
Ensembl chrNW_004624765:20,773,885...20,951,736 		JBrowse link
G Cadps calcium dependent secretion activator involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624888:2,985,966...3,443,542 JBrowse link
G Cadps2 calcium dependent secretion activator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624783:13,142,036...13,701,430
Ensembl chrNW_004624783:13,142,198...13,700,683 		JBrowse link
G Cplx1 complexin 1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:11751907 GO_REF:0000107 GO_REF:0000118 RGD:727333 NCBI chrNW_004624755:26,265,590...26,286,203
Ensembl chrNW_004624755:26,266,614...26,288,079 		JBrowse link
G Cplx2 complexin 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:11751907 GO_REF:0000118 RGD:727333 NCBI chrNW_004624733:14,085,085...14,170,711
Ensembl chrNW_004624733:14,089,018...14,097,508 		JBrowse link
G Cplx3 complexin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624894:42,204...49,875
Ensembl chrNW_004624894:45,093...49,923 		JBrowse link
G Doc2a double C2 domain alpha ISO RGD PMID:10651871 RGD:1357914 NCBI chrNW_004624782:13,217,553...13,221,763
Ensembl chrNW_004624782:13,217,736...13,221,457 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_positive_effect ISO (PMID:16818724) MGI PMID:16818724 NCBI chrNW_004624818:8,267,111...8,283,755
Ensembl chrNW_004624818:8,267,128...8,278,725 		JBrowse link
G Otof otoferlin involved_in
acts_upstream_of_or_within		 ISO (MGI:3692845|PMID:17055430), (PMID:17055430)
(PMID:17055430)
(MGI:3774237|PMID:18287496), (PMID:17055430)
(PMID:25609709)		 UniProt
SynGO
MGI		 PMID:17055430 PMID:18287496 PMID:25609709 MGI:3692845 MGI:3774237 NCBI chrNW_004624738:8,599,815...8,690,382
Ensembl chrNW_004624738:8,599,544...8,690,412 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (PMID:15713258) MGI PMID:15713258 NCBI chrNW_004624747:21,725,813...21,768,123
Ensembl chrNW_004624747:21,725,395...21,759,453 		JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 involved_in ISO (PMID:29439199) SynGO PMID:29439199 NCBI chrNW_004624832:4,941,760...4,964,615
Ensembl chrNW_004624832:4,941,766...4,964,602 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11359932) MGI
TreeGrafter		 PMID:11359932 GO_REF:0000118 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23616533) Ensembl
MGI		 PMID:23616533 GO_REF:0000107 NCBI chrNW_004624772:7,340,152...7,425,218
Ensembl chrNW_004624772:7,368,653...7,424,938 		JBrowse link
G Reln reelin involved_in ISO PMID:24210904 SynGO PMID:24210904 RGD:405650351 NCBI chrNW_004624739:25,472,626...25,918,064
Ensembl chrNW_004624739:25,472,561...25,918,167 		JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624741:11,218,259...11,303,406
Ensembl chrNW_004624741:11,274,490...11,302,813 		JBrowse link
G Snapin SNAP associated protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10195194) MGI
TreeGrafter
Ensembl		 PMID:10195194 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624885:3,490,321...3,491,963
Ensembl chrNW_004624885:3,490,321...3,491,946 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:28288128) UniProt PMID:28288128 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Sptbn2 spectrin beta, non-erythrocytic 2 involved_in ISO PMID:9826670 UniProt PMID:9826670 RGD:8553838 NCBI chrNW_004624767:19,694,471...19,734,653
Ensembl chrNW_004624767:19,694,241...19,734,650 		JBrowse link
G Stx1a syntaxin 1A involved_in ISO PMID:7901002
(PMID:27466336)
(PMID:26635000)		 SynGO
UniProt		 PMID:7901002 PMID:26635000 PMID:27466336 RGD:13702440 NCBI chrNW_004624740:14,104,033...14,120,133
Ensembl chrNW_004624740:14,104,050...14,120,133 		JBrowse link
G Stx1b syntaxin 1B involved_in ISO (PMID:27466336) SynGO PMID:27466336 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911 		JBrowse link
G Syt1 synaptotagmin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21040848) Ensembl
MGI		 PMID:21040848 GO_REF:0000107 NCBI chrNW_004624750:18,774,670...19,313,932
Ensembl chrNW_004624750:18,774,570...18,989,659 		JBrowse link
G Syt10 synaptotagmin 10 NOT|involved_in ISO (MGI:5751674|PMID:21496647) UniProt PMID:21496647 MGI:5751674 NCBI chrNW_004624778:2,700,545...2,763,134 JBrowse link
G Trim9 tripartite motif containing 9 ISO RGD PMID:11524423 RGD:631246 NCBI chrNW_004624731:17,851,106...17,969,461
Ensembl chrNW_004624731:17,851,116...17,969,453 		JBrowse link
G Unc13a unc-13 homolog A involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624908:418,248...464,203 JBrowse link
G Unc13b unc-13 homolog B involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
G Unc13c unc-13 homolog C involved_in ISO (PMID:11150314) SynGO PMID:11150314 NCBI chrNW_004624731:6,616,626...7,072,540
Ensembl chrNW_004624731:6,613,690...7,048,925 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:3573806|PMID:15475946)
(PMID:11691998)
PMID:1331807		 UniProt
MGI
SynGO		 PMID:1331807 PMID:11691998 PMID:15475946 MGI:3573806 RGD:13702243 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 involved_in ISO PMID:24210904 SynGO PMID:24210904 RGD:405650351 NCBI chrNW_004624980:40,937...94,547
Ensembl chrNW_004624980:40,843...94,528 		JBrowse link
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101706557 synaptosomal-associated protein 23-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:11,093,254...11,093,997 JBrowse link
G Prrt2 proline rich transmembrane protein 2 involved_in ISO (MGI:5792766|PMID:27052163) UniProt PMID:27052163 MGI:5792766 NCBI chrNW_004624782:13,390,347...13,393,775 JBrowse link
G Snap23 synaptosome associated protein 23 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:9,609,777...9,643,670
Ensembl chrNW_004624804:9,610,308...9,641,933 		JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:11,218,259...11,303,406
Ensembl chrNW_004624741:11,274,490...11,302,813 		JBrowse link
G Snap29 synaptosome associated protein 29 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624945:799,831...837,720
Ensembl chrNW_004624945:801,833...837,564 		JBrowse link
G Snap47 synaptosome associated protein 47 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624937:695,245...728,656
Ensembl chrNW_004624937:687,988...730,674 		JBrowse link
G Snapin SNAP associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19217378) Ensembl
MGI		 PMID:19217378 GO_REF:0000107 NCBI chrNW_004624885:3,490,321...3,491,963
Ensembl chrNW_004624885:3,490,321...3,491,946 		JBrowse link
G Stx11 syntaxin 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624753:10,150,811...10,180,794
Ensembl chrNW_004624753:10,148,416...10,191,153 		JBrowse link
G Stx19 syntaxin 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624789:6,740,514...6,757,694
Ensembl chrNW_004624789:6,744,858...6,756,127 		JBrowse link
G Stx1a syntaxin 1A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624740:14,104,033...14,120,133
Ensembl chrNW_004624740:14,104,050...14,120,133 		JBrowse link
G Stx1b syntaxin 1B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:14,054,762...14,073,890
Ensembl chrNW_004624782:14,057,346...14,073,911 		JBrowse link
G Stx4 syntaxin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624782:14,094,727...14,101,210
Ensembl chrNW_004624782:14,090,850...14,105,058 		JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap1 ATPase H+ transporting accessory protein 1 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624946:885,400...902,082
Ensembl chrNW_004624946:884,685...902,365 		JBrowse link
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:14,952,313...14,975,678
Ensembl chrNW_004624762:14,952,002...14,975,900 		JBrowse link
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624795:1,561,104...1,607,693
Ensembl chrNW_004624795:1,560,995...1,608,067 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624765:19,149,353...19,219,242
Ensembl chrNW_004624765:19,149,589...19,194,158 		JBrowse link
G Atp6v0c ATPase H+ transporting V0 subunit c involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624824:267,102...272,893
Ensembl chrNW_004624824:267,102...272,893 		JBrowse link
G Atp6v0d1 ATPase H+ transporting V0 subunit d1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:18,828,025...18,883,128
Ensembl chrNW_004624746:18,828,024...18,883,128 		JBrowse link
G Atp6v0e2 ATPase H+ transporting V0 subunit e2 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624800:6,160,091...6,164,426
Ensembl chrNW_004624800:6,156,364...6,164,455 		JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624731:34,721,142...34,780,632 JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624762:2,445,840...2,480,377
Ensembl chrNW_004624762:2,443,765...2,480,464 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:15,910,189...15,933,975
Ensembl chrNW_004624758:15,910,132...15,935,160 		JBrowse link
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624763:19,726,883...19,769,247
Ensembl chrNW_004624763:19,726,841...19,769,372 		JBrowse link
G Atp6v1d ATPase H+ transporting V1 subunit D involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624734:33,640,842...33,669,471
Ensembl chrNW_004624734:33,640,839...33,657,745 		JBrowse link
G Atp6v1e1 ATPase H+ transporting V1 subunit E1 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624735:9,704,600...9,726,297
Ensembl chrNW_004624735:9,703,863...9,726,275 		JBrowse link
G Atp6v1f ATPase H+ transporting V1 subunit F involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624783:7,328,113...7,331,648
Ensembl chrNW_004624783:7,328,113...7,331,666 		JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624760:20,627,985...20,636,670
Ensembl chrNW_004624760:20,624,624...20,636,631 		JBrowse link
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 involved_in ISO (PMID:28793259) SynGO PMID:28793259 NCBI chrNW_004624754:24,652,156...24,654,753
Ensembl chrNW_004624754:24,651,780...24,654,860 		JBrowse link
G Atp6v1h ATPase H+ transporting V1 subunit H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:1,785,558...1,957,103
Ensembl chrNW_004624735:1,831,597...1,961,669 		JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21378974) Ensembl
MGI		 PMID:21378974 GO_REF:0000107 NCBI chrNW_004624769:1,156,522...1,246,531
Ensembl chrNW_004624769:1,156,460...1,232,612 		JBrowse link
G Slc17a7 solute carrier family 17 member 7 acts_upstream_of_or_within ISO (PMID:19169251) MGI PMID:19169251 NCBI chrNW_004624832:4,765,233...4,775,515
Ensembl chrNW_004624832:4,765,212...4,775,515 		JBrowse link
synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator involved_in
acts_upstream_of_or_within		 ISO (MGI:5617001|PMID:25374362)
(PMID:18022372)
(PMID:21040848)		 SynGO
MGI		 PMID:18022372 PMID:21040848 PMID:25374362 MGI:5617001 NCBI chrNW_004624888:2,985,966...3,443,542 JBrowse link
G Cadps2 calcium dependent secretion activator 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:5617001|PMID:25374362)
(PMID:25437547)
(PMID:21040848)		 SynGO
MGI		 PMID:21040848 PMID:25374362 PMID:25437547 MGI:5617001 NCBI chrNW_004624783:13,142,036...13,701,430
Ensembl chrNW_004624783:13,142,198...13,700,683 		JBrowse link
G Efr3a EFR3 homolog A involved_in ISO (PMID:30867420) SynGO PMID:30867420 NCBI chrNW_004624735:23,875,299...23,964,030
Ensembl chrNW_004624735:23,873,431...23,964,093 		JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in ISO (PMID:27253063) SynGO PMID:27253063 NCBI chrNW_004624735:11,398,603...11,907,553
Ensembl chrNW_004624735:11,400,159...11,841,920 		JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in ISO (PMID:19874790), (PMID:27253063) SynGO PMID:19874790 PMID:27253063 NCBI chrNW_004624822:756,532...1,806,129
Ensembl chrNW_004624822:756,550...1,807,175 		JBrowse link
G LOC101706557 synaptosomal-associated protein 23-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:11,093,254...11,093,997 JBrowse link
G Napa NSF attachment protein alpha involved_in ISO (PMID:21040848) SynGO PMID:21040848 NCBI chrNW_004624832:6,301,251...6,323,445 JBrowse link
G Otof otoferlin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624738:8,599,815...8,690,382
Ensembl chrNW_004624738:8,599,544...8,690,412 		JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in ISO (PMID:21262469), (PMID:22753485) SynGO PMID:21262469 PMID:22753485 NCBI chrNW_004624763:20,027,601...20,567,288
Ensembl chrNW_004624763:20,027,574...20,567,688 		JBrowse link
G Rph3a rabphilin 3A involved_in ISO (PMID:16763567) SynGO PMID:16763567 NCBI chrNW_004624747:19,439,365...19,657,865
Ensembl chrNW_004624747:19,441,226...19,495,798 		JBrowse link
G Snap23 synaptosome associated protein 23 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624804:9,609,777...9,643,670
Ensembl chrNW_004624804:9,610,308...9,641,933 		JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:11,218,259...11,303,406
Ensembl chrNW_004624741:11,274,490...11,302,813 		JBrowse link
G Snap29 synaptosome associated protein 29 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624945:799,831...837,720
Ensembl chrNW_004624945:801,833...837,564 		JBrowse link
G Snap47 synaptosome associated protein 47 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624937:695,245...728,656
Ensembl chrNW_004624937:687,988...730,674 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:30404828) UniProt PMID:30404828 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in ISO (PMID:17110441) SynGO PMID:17110441 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484 		JBrowse link
G Sv2a synaptic vesicle glycoprotein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:17,684,061...17,698,728
Ensembl chrNW_004624772:17,681,299...17,696,884 		JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO (PMID:12481038) MGI PMID:12481038 NCBI chrNW_004624745:20,881,312...20,984,242
Ensembl chrNW_004624745:20,881,317...20,984,184 		JBrowse link
G Unc13a unc-13 homolog A involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:21499244 GO_REF:0000118 RGD:5686389 NCBI chrNW_004624908:418,248...464,203 JBrowse link
G Unc13b unc-13 homolog B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12070347) MGI
TreeGrafter		 PMID:12070347 GO_REF:0000118 NCBI chrNW_004624915:327,633...530,522
Ensembl chrNW_004624915:327,401...531,886 		JBrowse link
G Unc13c unc-13 homolog C involved_in ISO PMID:22966208 ParkinsonsUK-UCL PMID:22966208 RGD:11535109 NCBI chrNW_004624731:6,616,626...7,072,540
Ensembl chrNW_004624731:6,613,690...7,048,925 		JBrowse link
G Vamp1 vesicle associated membrane protein 1 involved_in ISO (PMID:24944211) SynGO PMID:24944211 NCBI chrNW_004624860:3,212,549...3,219,354
Ensembl chrNW_004624860:3,213,474...3,219,359 		JBrowse link
synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (PMID:20203623) MGI PMID:20203623 NCBI chrNW_004624829:608,065...637,096
Ensembl chrNW_004624829:608,065...634,479 		JBrowse link
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in ISO (MGI:4439191|PMID:20160091) UniProt PMID:20160091 MGI:4439191 NCBI chrNW_004624742:29,397,811...29,525,886
Ensembl chrNW_004624742:29,398,544...29,485,165 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624786:2,071,376...2,086,929
Ensembl chrNW_004624786:2,071,382...2,086,910 		JBrowse link
G Git2 GIT ArfGAP 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624747:10,518,651...10,580,179
Ensembl chrNW_004624747:10,518,671...10,580,179 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO PMID:16141272 ParkinsonsUK-UCL PMID:16141272 RGD:8693376 NCBI chrNW_004624908:1,532,857...1,537,159
Ensembl chrNW_004624908:1,530,312...1,536,129 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:16141272) ParkinsonsUK-UCL PMID:16141272 NCBI chrNW_004624821:5,271,246...5,311,469 JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:5560382|PMID:24569478) UniProt PMID:24569478 MGI:5560382 NCBI chrNW_004624926:722,201...765,834
Ensembl chrNW_004624926:722,224...765,033 		JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624741:788,445...838,513
Ensembl chrNW_004624741:789,355...839,507 		JBrowse link
G Dnm1l dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004624778:3,391,690...3,475,548 JBrowse link
G Myo5b myosin VB involved_in ISO PMID:18984164 SynGO PMID:18984164 RGD:11533643 NCBI chrNW_004624778:13,352,285...13,740,621
Ensembl chrNW_004624778:13,347,705...13,740,767 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO PMID:29950309 SynGO PMID:29950309 RGD:405650288 NCBI chrNW_004625042:56,509...112,519
Ensembl chrNW_004625042:56,517...112,612 		JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISO (MGI:3694190|PMID:10892652) UniProt PMID:10892652 MGI:3694190 NCBI chrNW_004624730:51,451,546...52,300,413
Ensembl chrNW_004624730:51,650,815...52,295,023 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (PMID:12805290) MGI PMID:12805290 NCBI chrNW_004624734:28,200,358...28,272,684
Ensembl chrNW_004624734:28,200,140...28,272,743 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) UniProt PMID:19458197 MGI:4365512 NCBI chrNW_004624735:12,997,358...13,018,765
Ensembl chrNW_004624735:12,997,408...13,018,533 		JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624742:29,397,811...29,525,886
Ensembl chrNW_004624742:29,398,544...29,485,165 		JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:5,304,887...5,330,440
Ensembl chrNW_004624828:5,305,070...5,330,440 		JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624736:21,554,950...21,715,522
Ensembl chrNW_004624736:21,554,969...21,716,877 		JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624768:19,168,922...19,320,366
Ensembl chrNW_004624768:19,168,951...19,321,184 		JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within
involved_in		 ISO (PMID:12481038)
(MGI:5300660|PMID:22099461), (PMID:10535736)
(PMID:10535736)		 MGI
SynGO		 PMID:10535736 PMID:12481038 PMID:22099461 MGI:5300660 NCBI chrNW_004624745:20,881,312...20,984,242
Ensembl chrNW_004624745:20,881,317...20,984,184 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15225
    localization 5008
      establishment of localization 4352
        establishment of localization in cell 1952
          synaptic vesicle cycle 257
            neurotransmitter loading into synaptic vesicle + 11
            regulation of synaptic vesicle cycle + 18
            synaptic vesicle clustering + 20
            synaptic vesicle exocytosis + 124
            synaptic vesicle lumen acidification + 20
            synaptic vesicle recycling + 106
Path 2
Term Annotations click to browse term
  biological_process 15225
    localization 5008
      establishment of localization 4352
        transport 4073
          vesicle-mediated transport 1463
            vesicle-mediated transport in synapse 311
              synaptic vesicle cycle 257
                neurotransmitter loading into synaptic vesicle + 11
                regulation of synaptic vesicle cycle + 18
                synaptic vesicle clustering + 20
                synaptic vesicle exocytosis + 124
                synaptic vesicle lumen acidification + 20
                synaptic vesicle recycling + 106
paths to the root