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ONTOLOGY REPORT - ANNOTATIONS


Term:postsynaptic specialization, intracellular component
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Accession:GO:0099091 term browser browse the term
Definition:A network of proteins adjacent to the postsynaptic membrane. Its major components include the proteins that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.



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postsynaptic specialization, intracellular component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gphn gephyrin part_of
located_in
is_active_in
IDA
ISO
PMID:9714149
(MGI:6189405|PMID:19955355)
RGD PMID:19955355 PMID:9714149 PMID:9714149 MGI:6189405, RGD:13702207, RGD:13702207 NCBI chr 6:96,954,365...97,483,617
Ensembl chr 6:96,892,148...97,483,612
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase is_active_in
part_of
IDA PMID:14529711 SynGO PMID:14529711 PMID:14529711 RGD:2303716, RGD:2303716 NCBI chr 5:141,888,319...141,916,992
Ensembl chr 5:141,888,326...141,903,794
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase is_active_in
part_of
IDA PMID:14529711 SynGO PMID:14529711 PMID:14529711 RGD:2303716, RGD:2303716 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
G Nos1 nitric oxide synthase 1 part_of
is_active_in
IDA PMID:12388603 SynGO PMID:12388603 PMID:12388603 RGD:12050093, RGD:12050093 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase is_active_in
part_of
IDA PMID:14529711 SynGO PMID:14529711 PMID:14529711 RGD:2303716, RGD:2303716 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Srgn serglycin is_active_in
located_in
ISO (MGI:4430657|PMID:19766573) RGD PMID:19766573 MGI:4430657 NCBI chr20:30,442,810...30,479,549
Ensembl chr20:30,442,813...30,457,406
JBrowse link
G Yes1 YES proto-oncogene 1, Src family tyrosine kinase part_of
is_active_in
IDA PMID:14529711 SynGO PMID:14529711 PMID:14529711 RGD:2303716, RGD:2303716 NCBI chr 9:113,200,256...113,275,942
Ensembl chr 9:113,200,256...113,299,837
JBrowse link
postsynaptic density, intracellular component term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase part_of
is_active_in
IDA PMID:20962234 SynGO PMID:20962234 PMID:20962234 RGD:13702252, RGD:13702252 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505
JBrowse link
G Actn2 actinin alpha 2 part_of
is_active_in
IDA PMID:9454847 SynGO PMID:9454847 PMID:9454847 RGD:13702332, RGD:13702332 NCBI chr17:58,143,334...58,210,622
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G Akap5 A-kinase anchoring protein 5 is_active_in
part_of
IDA
IMP
PMID:10939335 SynGO PMID:10939335 PMID:10939335 PMID:10939335 PMID:10939335 RGD:2313285, RGD:2313285, RGD:2313285, RGD:2313285 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
JBrowse link
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B is_active_in
part_of
IDA PMID:20575057 SynGO PMID:20575057 PMID:20575057 RGD:13702247, RGD:13702247 NCBI chr 7:24,313,810...25,479,307
Ensembl chr 7:24,312,843...25,477,693
JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 part_of
is_active_in
IMP
IDA
PMID:19208802 SynGO PMID:19208802 PMID:19208802 PMID:19208802 PMID:19208802 RGD:13432301, RGD:13432301, RGD:13432301, RGD:13432301 NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 part_of
is_active_in
IDA PMID:15673667 SynGO PMID:15673667 PMID:15673667 RGD:9684988, RGD:9684988 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase is_active_in
part_of
IDA PMID:20962234 SynGO PMID:20962234 PMID:20962234 RGD:13702252, RGD:13702252 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Cdkl5 cyclin-dependent kinase-like 5 part_of
is_active_in
IDA PMID:23671101 SynGO PMID:23671101 PMID:23671101 RGD:12791021, RGD:12791021 NCBI chr  X:33,757,605...33,988,075
Ensembl chr  X:33,821,257...33,986,582
JBrowse link
G Ctnna2 catenin alpha 2 is_active_in ISO (MGI:83903|PMID:8909549) RGD PMID:8909549 MGI:83903 NCBI chr 4:109,293,978...110,443,413
Ensembl chr 4:109,293,978...110,443,522
JBrowse link
G Ctnnb1 catenin beta 1 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:83903|PMID:8909549)
Ensembl
RGD
PMID:8909549 GO_REF:0000107 MGI:83903 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ctnnd1 catenin delta 1 is_active_in
part_of
IDA PMID:12727444 SynGO PMID:12727444 PMID:12727444 RGD:2316208, RGD:2316208 NCBI chr 3:69,683,328...69,734,550
Ensembl chr 3:69,683,313...69,734,516
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 part_of
is_active_in
IDA PMID:11029631 SynGO PMID:11029631 PMID:11029631 RGD:13702352, RGD:13702352 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Dlg3 discs large MAGUK scaffold protein 3 part_of
is_active_in
IDA PMID:20357126 SynGO PMID:20357126 PMID:20357126 RGD:13702192, RGD:13702192 NCBI chr  X:65,859,653...65,911,887
Ensembl chr  X:65,860,172...65,910,322
JBrowse link
G Dlgap1 DLG associated protein 1 is_active_in
part_of
IDA PMID:25775468 SynGO PMID:25775468 PMID:25775468 RGD:12050094, RGD:12050094 NCBI chr 9:109,857,500...110,726,817
Ensembl chr 9:110,167,448...110,726,817
JBrowse link
G Dnm2 dynamin 2 is_active_in
part_of
IMP
IDA
PMID:11583995 SynGO PMID:11583995 PMID:11583995 PMID:11583995 PMID:11583995 RGD:628513, RGD:628513, RGD:628513, RGD:628513 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase is_active_in
part_of
IDA PMID:27457929 SynGO PMID:27457929 PMID:27457929 RGD:11555024, RGD:11555024 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase part_of
is_active_in
IDA PMID:9371836 SynGO PMID:9371836 PMID:9371836 RGD:13702148, RGD:13702148 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 located_in
is_active_in
ISO (MGI:6191902|PMID:22886754) RGD PMID:22886754 MGI:6191902 NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172
JBrowse link
G Iqsec2 IQ motif and Sec7 domain ArfGEF 2 is_active_in
located_in
ISO (MGI:3772760|PMID:18164504) RGD PMID:18164504 MGI:3772760 NCBI chr  X:21,254,799...21,337,179
Ensembl chr  X:21,254,914...21,336,584
JBrowse link
G Nos1 nitric oxide synthase 1 is_active_in
part_of
IDA PMID:12388603 SynGO PMID:12388603 PMID:12388603 RGD:12050093, RGD:12050093 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 is_active_in
part_of
IDA PMID:21179518 SynGO PMID:21179518 PMID:21179518 RGD:4892203, RGD:4892203 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 part_of
is_active_in
IDA PMID:21179518 SynGO PMID:21179518 PMID:21179518 RGD:4892203, RGD:4892203 NCBI chr19:30,715,648...31,059,885
Ensembl chr19:30,715,648...31,059,885
JBrowse link
G Prr7 proline rich 7 (synaptic) part_of
is_active_in
IDA
IMP
PMID:15629447 SynGO PMID:15629447 PMID:15629447 PMID:15629447 PMID:15629447 RGD:1579799, RGD:1579799, RGD:1579799, RGD:1579799 NCBI chr17:9,164,375...9,173,669
Ensembl chr17:9,165,269...9,172,536
JBrowse link
G Psd pleckstrin and Sec7 domain containing located_in IEA
ISO
GO_REF:0000107
(MGI:5562465|PMID:24261326)
Ensembl
RGD
PMID:24261326 GO_REF:0000107 MGI:5562465 NCBI chr 1:245,173,279...245,188,681
Ensembl chr 1:245,173,279...245,189,356
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 is_active_in
part_of
IDA PMID:17088211 SynGO PMID:17088211 PMID:17088211 RGD:10047209, RGD:10047209 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 part_of
is_active_in
IMP
IDA
PMID:17088211 SynGO PMID:17088211 PMID:17088211 PMID:17088211 PMID:17088211 RGD:10047209, RGD:10047209, RGD:10047209, RGD:10047209 NCBI chr 1:136,124,502...136,255,669
Ensembl chr 1:136,124,499...136,255,584
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 is_active_in
part_of
IDA PMID:15894489 SynGO PMID:15894489 PMID:15894489 RGD:12050114, RGD:12050114 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Snx1 sorting nexin 1 is_active_in
located_in
ISO (MGI:5562465|PMID:24261326) RGD PMID:24261326 MGI:5562465 NCBI chr 8:66,630,086...66,670,418
Ensembl chr 8:66,630,086...66,670,360
JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 is_active_in
part_of
IDA PMID:21736925 SynGO PMID:21736925 PMID:21736925 RGD:7241542, RGD:7241542 NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 is_active_in
part_of
IDA
IMP
PMID:21068316 SynGO PMID:21068316 PMID:21068316 PMID:21068316 PMID:21068316 RGD:11353167, RGD:11353167, RGD:11353167, RGD:11353167 NCBI chr 3:44,099,387...44,335,478
Ensembl chr 3:44,134,016...44,331,627
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 is_active_in
part_of
IDA
IMP
PMID:21068316 SynGO PMID:21068316 PMID:21068316 PMID:21068316 PMID:21068316 RGD:11353167, RGD:11353167, RGD:11353167, RGD:11353167 NCBI chr10:90,553,124...90,873,477
Ensembl chr10:90,553,002...90,868,756
JBrowse link
G Tnik TRAF2 and NCK interacting kinase part_of
is_active_in
IDA PMID:20838393 SynGO PMID:20838393 PMID:20838393 RGD:13702418, RGD:13702418 NCBI chr 2:111,184,352...111,587,993
Ensembl chr 2:111,184,387...111,580,750
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19896
    cellular anatomical entity 19599
      organelle 13017
        postsynaptic specialization 462
          postsynaptic specialization, intracellular component 38
            postsynaptic density, intracellular component 32
            postsynaptic specialization of symmetric synapse, intracellular component 0
Path 2
Term Annotations click to browse term
  cellular_component 19896
    cellular anatomical entity 19599
      cell junction 2181
        synapse 1575
          postsynapse 788
            postsynaptic specialization 462
              postsynaptic specialization, intracellular component 38
                postsynaptic density, intracellular component 32
                postsynaptic specialization of symmetric synapse, intracellular component 0
paths to the root