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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle-mediated transport in synapse
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Accession:GO:0099003 term browser browse the term
Definition:Any vesicle-mediated transport that occurs in a synapse.



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vesicle-mediated transport in synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in ISO (MGI:5819335|PMID:24217640) SynGO PMID:24217640 MGI:5819335 NCBI chr20:56,893,479...56,932,460
Ensembl chr20:56,893,535...56,931,830
JBrowse link
G CPLX1 complexin 1 involved_in ISO (MGI:5315203|PMID:22284181) SynGO PMID:22284181 MGI:5315203 NCBI chr 3:91,635,953...91,658,084
Ensembl chr 3:91,638,515...91,656,737
JBrowse link
G GRIP1 glutamate receptor interacting protein 1 involved_in ISO (MGI:4840152|PMID:20956289) SynGO PMID:20956289 MGI:4840152 NCBI chr10:8,801,023...9,187,684
Ensembl chr10:8,802,529...9,063,848
JBrowse link
G GRIP2 glutamate receptor interacting protein 2 involved_in ISO (MGI:4840152|PMID:20956289) SynGO PMID:20956289 MGI:4840152 NCBI chr20:4,618,702...4,677,040
Ensembl chr20:4,620,179...4,677,263
JBrowse link
G LOC479600 beta-catenin-interacting protein 1 involved_in ISO (MGI:5581343|PMID:24966372) SynGO PMID:24966372 MGI:5581343 NCBI chr 5:62,937,154...63,093,083
Ensembl chr 5:62,938,511...63,093,275
JBrowse link
G MAPK10 mitogen-activated protein kinase 10 involved_in ISO PMID:23838184 SynGO PMID:23838184 RGD:13702338 NCBI chr32:9,584,437...9,889,118
Ensembl chr32:9,575,492...9,884,325
JBrowse link
G MYO5B myosin VB involved_in ISO PMID:18984164 SynGO PMID:18984164 RGD:11533643 NCBI chr 7:78,671,636...79,006,010
Ensembl chr 7:78,671,616...79,006,006
JBrowse link
G NSG1 neuronal vesicle trafficking associated 1 involved_in ISO (MGI:5819354|PMID:16037816) SynGO PMID:16037816 MGI:5819354 NCBI chr 3:69,805,646...69,831,200
Ensembl chr 3:69,805,592...69,831,194
JBrowse link
G RAB11A RAB11A, member RAS oncogene family involved_in ISO PMID:18045925 SynGO PMID:18045925 RGD:2306457 NCBI chr30:30,200,831...30,218,412
Ensembl chr30:30,200,831...30,218,411
JBrowse link
G RAB8A RAB8A, member RAS oncogene family involved_in ISO PMID:18045925
PMID:15297461
SynGO PMID:15297461 PMID:18045925 RGD:2306456 RGD:2306457 NCBI chr20:46,334,601...46,351,907
Ensembl chr20:46,334,601...46,351,907
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in ISO PMID:25310985 SynGO PMID:25310985 RGD:12050130 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681
JBrowse link
G SNAP23 synaptosome associated protein 23 involved_in ISO PMID:26839408 SynGO PMID:26839408 RGD:12050145 NCBI chr30:9,453,931...9,493,506
Ensembl chr30:9,456,084...9,492,329
JBrowse link
G SNAP47 synaptosome associated protein 47 involved_in ISO (MGI:5494785|PMID:23395379) SynGO PMID:23395379 MGI:5494785 NCBI chr14:1,058,891...1,104,568
Ensembl chr14:1,056,802...1,104,574
JBrowse link
G STX3 syntaxin 3 involved_in ISO (MGI:5494785|PMID:23395379) SynGO PMID:23395379 MGI:5494785 NCBI chr21:50,298,040...50,322,773
Ensembl chr21:50,298,158...50,318,663
JBrowse link
G STX4 syntaxin 4 involved_in ISO PMID:20434989 SynGO PMID:20434989 RGD:13702188 NCBI chr 6:17,184,044...17,189,481
Ensembl chr 6:17,184,399...17,189,370
JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (MGI:6114586|PMID:28384478) SynGO PMID:28384478 MGI:6114586 NCBI chr15:8,428,073...8,454,601
Ensembl chr15:8,428,172...8,454,049
JBrowse link
aminergic neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDC dopa decarboxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chr18:1,802,239...1,876,714
Ensembl chr18:1,803,273...1,867,616
JBrowse link
G SLC18A1 solute carrier family 18 member A1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:36,859,047...36,904,057
Ensembl chr25:36,872,636...36,904,056
JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO RGD PMID:19903816 RGD:5128868 NCBI chr28:27,731,709...27,809,341
Ensembl chr28:27,731,004...27,767,993
JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:19903816 RGD:5128868 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602
JBrowse link
calcium ion-regulated exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1A calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO (MGI:1353373|PMID:10670432) MGI PMID:10670432 MGI:1353373 NCBI chr20:48,747,087...49,036,627
Ensembl chr20:48,821,025...49,036,032
JBrowse link
G DOC2B double C2 domain beta involved_in ISO (MGI:4439222|PMID:20150444) UniProt PMID:20150444 MGI:4439222 RGD:8554647 NCBI chr 9:45,450,270...45,488,638
Ensembl chr 9:45,450,302...45,485,247
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 acts_upstream_of_or_within ISO (MGI:3703478|PMID:17124501) MGI PMID:17124501 MGI:3703478 NCBI chr12:34,473,974...34,661,893
Ensembl chr12:34,474,033...34,659,410
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 acts_upstream_of_or_within ISO (MGI:3703478|PMID:17124501) MGI PMID:17124501 MGI:3703478 NCBI chr13:4,928,518...5,499,258
Ensembl chr13:4,927,121...5,496,629
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:2,353,876...2,391,742
Ensembl chr15:2,353,693...2,404,431
JBrowse link
G SNAP25 synaptosome associated protein 25 ISO RGD PMID:14980208 RGD:1581082 NCBI chr24:12,003,005...12,081,385
Ensembl chr24:12,004,117...12,081,329
JBrowse link
G STX1B syntaxin 1B involved_in ISO (MGI:3803800|PMID:18703708) ParkinsonsUK-UCL PMID:18703708 MGI:3803800 NCBI chr 6:17,209,972...17,219,903
Ensembl chr 6:17,210,433...17,241,363
JBrowse link
G SYT1 synaptotagmin 1 acts_upstream_of_or_within ISO (MGI:5141208|PMID:21521611) MGI PMID:21521611 MGI:5141208 NCBI chr15:21,629,061...22,042,734
Ensembl chr15:21,834,763...22,042,732
JBrowse link
G SYT5 synaptotagmin 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:102,456,767...102,463,750
Ensembl chr 1:102,456,782...102,463,749
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:5707519|PMID:26738595) UniProt PMID:26738595 MGI:5707519 NCBI chr18:54,863,072...54,926,121
Ensembl chr18:54,861,754...54,921,367
JBrowse link
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MVP major vault protein involved_in ISO (MGI:5792766|PMID:27052163) SynGO PMID:27052163 MGI:5792766 NCBI chr 6:17,872,670...17,877,502
Ensembl chr 6:17,873,521...17,903,184
JBrowse link
G SYT1 synaptotagmin 1 involved_in ISO (MGI:69538|PMID:7954835) SynGO PMID:7954835 MGI:69538 NCBI chr15:21,629,061...22,042,734
Ensembl chr15:21,834,763...22,042,732
JBrowse link
G SYT2 synaptotagmin 2 involved_in ISO (MGI:3695515|PMID:17192432) SynGO PMID:17192432 MGI:3695515 NCBI chr 7:497,387...509,338
Ensembl chr 7:497,394...502,952
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:5554634|PMID:24267651) SynGO PMID:24267651 MGI:5554634 NCBI chr18:54,863,072...54,926,121
Ensembl chr18:54,861,754...54,921,367
JBrowse link
G SYT9 synaptotagmin 9 involved_in ISO (MGI:3714434|PMID:17521570) SynGO PMID:17521570 MGI:3714434 NCBI chr21:30,985,059...31,123,986
Ensembl chr21:30,986,521...31,162,414
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD8 BTB domain containing 8 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:56,756,682...56,849,849
Ensembl chr 6:56,698,320...56,900,173
JBrowse link
G ITSN1 intersectin 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:29,144,754...29,360,134 JBrowse link
fast, calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT1 synaptotagmin 1 involved_in ISO (MGI:3653150|PMID:9194562), (MGI:69538|PMID:7954835)
(MGI:3040539|PMID:12526776)
ParkinsonsUK-UCL PMID:7954835 PMID:9194562 PMID:12526776 MGI:3040539 MGI:3653150 MGI:69538 NCBI chr15:21,629,061...22,042,734
Ensembl chr15:21,834,763...22,042,732
JBrowse link
induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1D calcium voltage-gated channel subunit alpha1 D involved_in IEA GOC GO_REF:0000108 NCBI chr20:36,189,986...36,488,460
Ensembl chr20:36,191,810...36,613,686
JBrowse link
G CNR1 cannabinoid receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr12:47,537,240...47,560,723
Ensembl chr12:47,509,583...47,560,983
JBrowse link
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTEN phosphatase and tensin homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT11 synaptotagmin 11 involved_in ISO PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 7:41,910,102...41,929,020
Ensembl chr 7:41,912,920...41,929,617
JBrowse link
negative regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRAF B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:5490391 NCBI chr16:8,222,909...8,318,179
Ensembl chr16:8,222,907...8,317,906
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in ISO PMID:24709664 UniProt PMID:24709664 RGD:11059581 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G RAP1A RAP1A, member of RAS oncogene family acts_upstream_of_or_within ISO (MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:5490391 NCBI chr17:63,725,812...63,795,359
Ensembl chr17:63,726,248...63,746,881
JBrowse link
G RAP1B RAP1B, member of RAS oncogene family acts_upstream_of_or_within ISO (MGI:5490391|PMID:23616533) MGI PMID:23616533 MGI:5490391 NCBI chr10:10,805,359...10,816,839
Ensembl chr10:10,805,357...10,815,575
JBrowse link
G SYT4 synaptotagmin 4 involved_in ISO (MGI:4457852|PMID:19448629) SynGO-UCL PMID:19448629 MGI:4457852 NCBI chr 7:47,555,110...47,565,313
Ensembl chr 7:47,509,852...47,563,714
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYFIP1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:26843638 RGD:11342679 NCBI chr 3:32,096,471...32,170,107
Ensembl chr 3:32,097,037...32,187,781
JBrowse link
G STX1B syntaxin 1B involved_in ISO (MGI:5603022|PMID:24587181) ParkinsonsUK-UCL PMID:24587181 MGI:5603022 NCBI chr 6:17,209,972...17,219,903
Ensembl chr 6:17,210,433...17,241,363
JBrowse link
neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC17A6 solute carrier family 17 member 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:44,015,161...44,056,286
Ensembl chr21:44,016,133...44,054,931
JBrowse link
G SLC17A7 solute carrier family 17 member 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:107,054,242...107,064,444
Ensembl chr 1:107,054,410...107,063,550
JBrowse link
G SLC17A8 solute carrier family 17 member 8 involved_in ISO (PMID:12097496) SynGO PMID:12097496 NCBI chr15:39,443,790...39,489,988
Ensembl chr15:39,443,518...39,486,595
JBrowse link
G SLC18A2 solute carrier family 18 member A2 involved_in ISO (MGI:1194523|PMID:9427251) SynGO PMID:9427251 MGI:1194523 NCBI chr28:27,731,709...27,809,341
Ensembl chr28:27,731,004...27,767,993
JBrowse link
G SLC18A3 solute carrier family 18 member A3 involved_in ISO PMID:9182805
(MGI:6189683|PMID:4075114)
SynGO PMID:4075114 PMID:9182805 MGI:6189683 RGD:13702424 NCBI chr28:1,476,873...1,478,538
Ensembl chr28:1,476,774...1,478,505
JBrowse link
G SLC32A1 solute carrier family 32 member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:27,142,153...27,146,986
Ensembl chr24:27,142,423...27,146,262
JBrowse link
positive regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SYT1 synaptotagmin 1 involved_in ISO (MGI:2179533|PMID:11242035) UniProt PMID:11242035 MGI:2179533 NCBI chr15:21,629,061...22,042,734
Ensembl chr15:21,834,763...22,042,732
JBrowse link
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G CDH2 cadherin 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chr 7:60,736,760...60,950,477
Ensembl chr 7:60,736,760...60,951,034
JBrowse link
G MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) BHF-UCL PMID:20534458 MGI:4457945 NCBI chr18:17,973,058...19,098,785
Ensembl chr18:17,918,928...18,930,059
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO (MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:5284797 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NLGN2 neuroligin 2 involved_in ISO (MGI:5284797|PMID:15620359) BHF-UCL PMID:15620359 MGI:5284797 NCBI chr 5:32,338,602...32,351,546
Ensembl chr 5:32,340,335...32,352,412
JBrowse link
G NLGN3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) CACAO PMID:21808020 MGI:5286761 NCBI chr  X:55,510,729...55,532,396
Ensembl chr  X:55,513,626...55,531,371
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:22851330 RGD:13506174 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:22851330 RGD:13506174 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937) UniProt PMID:33478937 MGI:6694370 NCBI chr18:136,338...353,974
Ensembl chr18:135,690...352,871
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 ISO RGD PMID:19762466 RGD:13461856 NCBI chr34:17,071,199...17,080,445
Ensembl chr34:17,071,235...17,080,445
JBrowse link
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:17437541 RGD:8554440 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G DNM1L dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G LRRK2 leucine rich repeat kinase 2 ISO RGD PMID:18445495 RGD:13462049 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G MFF mitochondrial fission factor involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr25:40,111,860...40,142,246
Ensembl chr25:40,111,894...40,141,776
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO (MGI:4355770|PMID:19628693) BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:21808019 RGD:13506237 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:26627835 RGD:11532172 NCBI chr25:34,732,268...34,839,743
Ensembl chr25:34,725,226...34,838,994
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:14532001 RGD:13464359 NCBI chr20:55,279,622...55,311,579
Ensembl chr20:55,279,621...55,311,536
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:21808019 RGD:13506237 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
G TOR1A torsin family 1 member A involved_in ISO (PMID:21102408) UniProt PMID:21102408 NCBI chr 9:54,017,895...54,027,049
Ensembl chr 9:54,017,952...54,026,680
JBrowse link
positive regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G DNM1L dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO PMID:19628693
(MGI:4355770|PMID:19628693)
BHF-UCL PMID:19628693 MGI:4355770 RGD:8554760 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G SLC4A8 solute carrier family 4 member 8 acts_upstream_of_or_within ISO (MGI:5013899|PMID:21593314) ARUK-UCL PMID:21593314 MGI:5013899 NCBI chr27:3,398,776...3,460,562
Ensembl chr27:3,403,804...3,460,583
JBrowse link
positive regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RIMS1 regulating synaptic membrane exocytosis 1 involved_in ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chr12:34,473,974...34,661,893
Ensembl chr12:34,474,033...34,659,410
JBrowse link
G UNC13B unc-13 homolog B involved_in ISO PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chr11:51,707,968...51,941,148
Ensembl chr11:51,708,302...51,940,955
JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 ISO RGD PMID:17880892 RGD:8553820 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G DNM3 dynamin 3 ISO RGD PMID:23687302 RGD:13462065 NCBI chr 7:26,569,708...27,024,939
Ensembl chr 7:26,574,453...27,024,759
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein ISO RGD PMID:31074746 RGD:41408338 NCBI chr18:22,385,102...22,701,944
Ensembl chr18:22,385,100...22,706,793
JBrowse link
G PLAA phospholipase A2 activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:45,121,423...45,159,093
Ensembl chr11:45,121,588...45,159,098
JBrowse link
postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2B1 adaptor related protein complex 2 subunit beta 1 involved_in ISO (MGI:5819335|PMID:24217640) SynGO PMID:24217640 MGI:5819335 NCBI chr 9:37,946,761...38,078,074
Ensembl chr 9:37,946,788...38,078,041
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 involved_in ISO (MGI:5819335|PMID:24217640)
PMID:17289840
SynGO PMID:17289840 PMID:24217640 MGI:5819335 RGD:13432317 NCBI chr34:17,071,199...17,080,445
Ensembl chr34:17,071,235...17,080,445
JBrowse link
G CALY calcyon neuron specific vesicular protein involved_in ISO (MGI:3836481|PMID:19120439) SynGO PMID:19120439 MGI:3836481 NCBI chr28:40,918,341...40,925,161
Ensembl chr28:40,918,343...40,925,070
JBrowse link
G DNM3 dynamin 3 involved_in ISO PMID:17880892 SynGO PMID:17880892 RGD:8553820 NCBI chr 7:26,569,708...27,024,939
Ensembl chr 7:26,574,453...27,024,759
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in ISO PMID:25023288 SynGO PMID:25023288 RGD:13702241 NCBI chr15:9,834,285...9,895,755
Ensembl chr15:9,787,260...9,893,540
JBrowse link
G MYO6 myosin VI involved_in ISO (MGI:3527915|PMID:15657400) SynGO PMID:15657400 MGI:3527915 NCBI chr12:37,359,200...37,502,342
Ensembl chr12:37,413,570...37,500,724
JBrowse link
G SYNJ1 synaptojanin 1 involved_in ISO (MGI:5819348|PMID:18987319) SynGO PMID:18987319 MGI:5819348 NCBI chr31:27,308,169...27,399,226
Ensembl chr31:27,308,169...27,399,197
JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADPS calcium dependent secretion activator involved_in ISO (MGI:5634021|PMID:25719439) SynGO PMID:25719439 MGI:5634021 NCBI chr20:28,221,150...28,680,844
Ensembl chr20:28,221,843...28,680,131
JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in ISO (MGI:3621672|PMID:11545717) SynGO PMID:11545717 MGI:3621672 NCBI chr 9:55,690,939...55,768,008
Ensembl chr 9:55,678,264...55,727,680
JBrowse link
G SYT6 synaptotagmin 6 involved_in ISO PMID:26216953 SynGO PMID:26216953 RGD:13702162 NCBI chr17:51,859,564...51,923,044
Ensembl chr17:51,864,774...51,924,676
JBrowse link
G UNC13A unc-13 homolog A involved_in ISO (MGI:5819330|PMID:26575293) SynGO PMID:26575293 MGI:5819330 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115
JBrowse link
G UNC13B unc-13 homolog B involved_in ISO (MGI:5819330|PMID:26575293) SynGO PMID:26575293 MGI:5819330 NCBI chr11:51,707,968...51,941,148
Ensembl chr11:51,708,302...51,940,955
JBrowse link
regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:4866942|PMID:21106823) MGI PMID:21106823 MGI:4866942 NCBI chr26:8,148,181...8,209,392
Ensembl chr26:8,148,236...8,209,388
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (MGI:3652690|PMID:16782817) ParkinsonsUK-UCL PMID:16782817 MGI:3652690 NCBI chr19:37,861,844...38,006,433
Ensembl chr19:37,861,804...37,963,501
JBrowse link
regulation of neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC10A4 solute carrier family 10 member 4 involved_in ISO (MGI:5913479|PMID:25176177) SynGO PMID:25176177 MGI:5913479 NCBI chr13:44,293,956...44,299,529
Ensembl chr13:44,277,094...44,299,732
JBrowse link
regulation of postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKAP5 A-kinase anchoring protein 5 involved_in ISO PMID:19169250 SynGO PMID:19169250 RGD:2313185 NCBI chr 8:38,891,637...38,902,390
Ensembl chr 8:38,896,840...38,898,126
JBrowse link
G ARC activity regulated cytoskeleton associated protein involved_in ISO (MGI:6189470|PMID:17088211) SynGO PMID:17088211 MGI:6189470 NCBI chr13:36,743,027...36,744,266 JBrowse link
G ATAD1 ATPase family AAA domain containing 1 involved_in ISO (MGI:5050342|PMID:21496646) SynGO PMID:21496646 MGI:5050342 NCBI chr26:37,749,799...37,811,490
Ensembl chr26:37,750,649...37,794,149
JBrowse link
G DRD3 dopamine receptor D3 involved_in ISO PMID:16510729 SynGO PMID:16510729 RGD:13702467 NCBI chr33:18,369,362...18,414,465
Ensembl chr33:18,372,865...18,412,277
JBrowse link
G DRD4 dopamine receptor D4 involved_in ISO (MGI:3826939|PMID:18832154) SynGO PMID:18832154 MGI:3826939
G EFNB2 ephrin B2 involved_in ISO (MGI:3814755|PMID:19160501) SynGO PMID:19160501 MGI:3814755 NCBI chr22:55,567,992...55,609,210
Ensembl chr22:55,566,039...55,609,443
JBrowse link
G GSG1L GSG1 like involved_in ISO (MGI:6189390|PMID:26932439) SynGO PMID:26932439 MGI:6189390 NCBI chr 6:18,700,011...18,899,831
Ensembl chr 6:18,699,457...18,897,663
JBrowse link
G HAP1 huntingtin associated protein 1 involved_in ISO PMID:15310851 SynGO PMID:15310851 RGD:13702182 NCBI chr 9:21,065,770...21,074,462
Ensembl chr 9:21,065,846...21,072,991
JBrowse link
G HPCA hippocalcin involved_in ISO PMID:20852624 SynGO PMID:20852624 RGD:13702412 NCBI chr 2:68,464,631...68,473,661
Ensembl chr 2:68,465,280...68,473,310
JBrowse link
G IQSEC1 IQ motif and Sec7 domain ArfGEF 1 involved_in ISO (MGI:4821212|PMID:20547133) SynGO PMID:20547133 MGI:4821212 NCBI chr20:3,241,058...3,403,394
Ensembl chr20:3,241,052...3,522,859
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in ISO (PMID:18549786) SynGO PMID:18549786 NCBI chr 9:9,179,667...9,231,061
Ensembl chr 9:9,182,562...9,231,451
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase involved_in ISO PMID:21148011 SynGO PMID:21148011 RGD:13702142 NCBI chr30:21,123,333...21,229,907
Ensembl chr30:21,126,043...21,229,870
JBrowse link
G NRG1 neuregulin 1 involved_in ISO (PMID:16221846) SynGO PMID:16221846 NCBI chr16:31,697,958...32,771,888
Ensembl chr16:31,706,851...32,771,932
JBrowse link
G NUMB NUMB endocytic adaptor protein involved_in ISO (MGI:5705662|PMID:26621723) SynGO PMID:26621723 MGI:5705662 NCBI chr 8:46,620,444...46,781,564
Ensembl chr 8:46,607,556...46,782,175
JBrowse link
G OPHN1 oligophrenin 1 involved_in ISO (PMID:24966368) SynGO PMID:24966368 NCBI chr  X:52,418,390...52,983,155
Ensembl chr  X:52,455,373...52,982,244
JBrowse link
G PACSIN1 protein kinase C and casein kinase substrate in neurons 1 involved_in ISO PMID:23918399
PMID:16617342
SynGO PMID:16617342 PMID:23918399 RGD:13702399 RGD:13702454 NCBI chr12:3,754,075...3,811,717
Ensembl chr12:3,753,717...3,809,986
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISO PMID:28855251 SynGO PMID:28855251 RGD:13702248 NCBI chr10:26,595,301...26,614,170
Ensembl chr10:26,595,768...26,613,756
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:6189392|PMID:22243752) SynGO PMID:22243752 MGI:6189392 NCBI chr20:55,751,055...55,801,740
Ensembl chr20:55,751,158...55,799,160
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha involved_in ISO (MGI:2154682|PMID:11733061) SynGO PMID:11733061 MGI:2154682 NCBI chr10:67,242,552...67,308,469
Ensembl chr10:67,244,329...67,275,487
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in ISO PMID:25310985 SynGO PMID:25310985 RGD:12050130 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681
JBrowse link
G SIRT2 sirtuin 2 involved_in ISO PMID:28793258 SynGO PMID:28793258 RGD:13702139 NCBI chr 1:114,224,922...114,235,041
Ensembl chr 1:114,224,900...114,234,583
JBrowse link
G SYNE1 spectrin repeat containing nuclear envelope protein 1 ISO RGD PMID:24191017 RGD:13209020 NCBI chr 1:42,384,136...42,831,229
Ensembl chr 1:42,384,038...42,823,388
JBrowse link
G SYNJ1 synaptojanin 1 involved_in ISO (MGI:5819348|PMID:18987319) SynGO PMID:18987319 MGI:5819348 NCBI chr31:27,308,169...27,399,226
Ensembl chr31:27,308,169...27,399,197
JBrowse link
G USP46 ubiquitin specific peptidase 46 involved_in ISO PMID:26077708 SynGO PMID:26077708 RGD:11056935 NCBI chr13:45,381,974...45,475,212
Ensembl chr13:45,384,641...45,439,096
JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2RX7 purinergic receptor P2X 7 involved_in ISO PMID:24037803 SynGO PMID:24037803 RGD:13702177 NCBI chr26:7,928,863...7,983,956
Ensembl chr26:7,940,985...7,983,740
JBrowse link
G SYT4 synaptotagmin 4 involved_in ISO (MGI:4457852|PMID:19448629) SynGO PMID:19448629 MGI:4457852 NCBI chr 7:47,555,110...47,565,313
Ensembl chr 7:47,509,852...47,563,714
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIPAP1 GRIP1 associated protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:42,121,646...42,145,330
Ensembl chr  X:42,121,301...42,145,218
JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A4 solute carrier family 2 member 4 involved_in ISO PMID:28111082 SynGO PMID:28111082 RGD:13702195 NCBI chr 5:32,238,095...32,244,022
Ensembl chr 5:32,238,095...32,244,021
JBrowse link
regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCDH17 protocadherin 17 acts_upstream_of_or_within ISO (MGI:5514320|PMID:23684785) MGI PMID:23684785 MGI:5514320 NCBI chr22:13,865,138...13,962,110
Ensembl chr22:13,865,900...13,958,405
JBrowse link
regulation of synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSN bassoon presynaptic cytomatrix protein involved_in ISO (MGI:4879069|PMID:21092860) SynGO PMID:21092860 MGI:4879069 NCBI chr20:39,601,803...39,696,831
Ensembl chr20:39,605,117...39,642,298
JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in ISO PMID:24254883 SynGO PMID:24254883 RGD:13702178 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569
JBrowse link
G DNAJC5 DnaJ heat shock protein family (Hsp40) member C5 involved_in ISO (MGI:5440402|PMID:22500637) SynGO PMID:22500637 MGI:5440402
G NRXN1 neurexin 1 involved_in ISO (MGI:4366191|PMID:19822762) SynGO PMID:19822762 MGI:4366191 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G PLD1 phospholipase D1 involved_in ISO (PMID:11752468) SynGO PMID:11752468 NCBI chr34:35,917,759...36,080,383
Ensembl chr34:35,921,058...36,121,631
JBrowse link
G PLS3 plastin 3 involved_in ISO (MGI:5469774|PMID:23263861) SynGO PMID:23263861 MGI:5469774 NCBI chr  X:88,308,817...88,399,682
Ensembl chr  X:88,308,888...88,398,810
JBrowse link
G PRKAR1B protein kinase cAMP-dependent type I regulatory subunit beta involved_in ISO (MGI:77916|PMID:8548807) SynGO PMID:8548807 MGI:77916 NCBI chr 6:16,135,406...16,248,567
Ensembl chr 6:16,135,715...16,247,465
JBrowse link
G RAB3B RAB3B, member RAS oncogene family involved_in ISO (PMID:20007772) SynGO PMID:20007772 NCBI chr15:9,305,495...9,378,003
Ensembl chr15:9,319,057...9,372,518
JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 involved_in ISO (MGI:5641291|PMID:25904804) SynGO PMID:25904804 MGI:5641291 NCBI chr36:17,087,488...17,323,504
Ensembl chr36:17,087,488...17,323,220
JBrowse link
G SNAP29 synaptosome associated protein 29 involved_in ISO PMID:15890653 SynGO PMID:15890653 RGD:13702146 NCBI chr26:30,606,195...30,630,441
Ensembl chr26:30,609,158...30,630,262
JBrowse link
G SYN1 synapsin I involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,191,571...41,241,557
Ensembl chr  X:41,191,571...41,241,640
JBrowse link
regulation of synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMK2A calcium/calmodulin dependent protein kinase II alpha involved_in ISO (MGI:3763684|PMID:17660813) SynGO PMID:17660813 MGI:3763684 NCBI chr 4:58,800,818...58,865,830
Ensembl chr 4:58,800,813...58,865,830
JBrowse link
G SEPTIN5 septin 5 involved_in ISO (MGI:4880833|PMID:20624595) SynGO PMID:20624595 MGI:4880833 NCBI chr26:29,568,776...29,573,837
Ensembl chr26:29,569,586...29,573,842
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTBD9 BTB domain containing 9 acts_upstream_of_or_within ISO (MGI:5438074|PMID:22536397) MGI PMID:22536397 MGI:5438074 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017
JBrowse link
G CALM1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195
JBrowse link
G CALM2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457
JBrowse link
G CALM3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391
JBrowse link
G DGKQ diacylglycerol kinase theta involved_in ISO (MGI:5807028|PMID:26748701) SynGO PMID:26748701 MGI:5807028 NCBI chr 3:91,544,350...91,554,494
Ensembl chr 3:91,544,219...91,554,565
JBrowse link
G DNM1 dynamin 1 ISO RGD PMID:16648848 RGD:13504740 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO RGD PMID:18842885 RGD:8554167 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
G PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) SynGO PMID:15386003 MGI:3054280 NCBI chr20:55,751,055...55,801,740
Ensembl chr20:55,751,158...55,799,160
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta involved_in ISO (MGI:4830393|PMID:20810903) SynGO PMID:20810903 MGI:4830393 NCBI chr 4:23,976,023...24,028,139
Ensembl chr 4:23,977,317...24,028,153
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma involved_in ISO PMID:26627835 SynGO PMID:26627835 RGD:11532172 NCBI chr25:34,732,268...34,839,743
Ensembl chr25:34,725,226...34,838,994
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (PMID:27160703) ARUK-UCL PMID:27160703 NCBI chr 7:66,862,614...67,001,538
Ensembl chr 7:66,862,608...67,142,853
JBrowse link
G SCAMP5 secretory carrier membrane protein 5 involved_in ISO PMID:25057210 SynGO PMID:25057210 RGD:13702419 NCBI chr30:38,007,967...38,029,541
Ensembl chr30:38,008,035...38,030,881
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 ISO RGD PMID:22750032 RGD:13463484 NCBI chr20:55,279,622...55,311,579
Ensembl chr20:55,279,621...55,311,536
JBrowse link
G SLC17A7 solute carrier family 17 member 7 ISO RGD PMID:16815333 RGD:13504741 NCBI chr 1:107,054,242...107,064,444
Ensembl chr 1:107,054,410...107,063,550
JBrowse link
G SNAP91 synaptosome associated protein 91 ISO RGD PMID:18842885 RGD:8554167 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) SynGO PMID:14532108 MGI:6189675 NCBI chr18:54,863,072...54,926,121
Ensembl chr18:54,861,754...54,921,367
JBrowse link
G VAMP4 vesicle associated membrane protein 4 involved_in ISO PMID:26607000 SynGO PMID:26607000 RGD:11058152 NCBI chr 7:27,278,200...27,303,499
Ensembl chr 7:27,278,231...27,302,225
JBrowse link
regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in ISO (MGI:1202483|PMID:9547227) SynGO PMID:9547227 MGI:1202483 NCBI chr16:1,064,644...1,166,864
Ensembl chr16:1,037,162...1,167,094
JBrowse link
G ADORA2A adenosine A2a receptor involved_in ISO PMID:15659214 SynGO PMID:15659214 RGD:1625642 NCBI chr26:28,141,076...28,150,600
Ensembl chr26:28,141,076...28,150,598
JBrowse link
G ADORA2B adenosine A2b receptor involved_in ISO (MGI:6108216|PMID:25704806) SynGO PMID:25704806 MGI:6108216 NCBI chr 5:39,884,375...39,908,214 JBrowse link
G ADORA3 adenosine A3 receptor involved_in ISO PMID:8987783 SynGO PMID:8987783 RGD:13702310 NCBI chr17:63,895,408...63,898,666
Ensembl chr17:63,895,408...63,898,666
JBrowse link
G ADRA1A adrenoceptor alpha 1A involved_in ISO PMID:12548707 SynGO PMID:12548707 RGD:13702265 NCBI chr25:30,690,959...30,801,484
Ensembl chr25:30,693,571...30,801,486
JBrowse link
G ADRA2A adrenoceptor alpha 2A involved_in ISO (MGI:3761775|PMID:11927164) SynGO PMID:11927164 MGI:3761775 NCBI chr28:22,366,989...22,392,163
Ensembl chr28:22,367,780...22,370,684
JBrowse link
G ADRB2 adrenoceptor beta 2 involved_in ISO PMID:17175110 SynGO PMID:17175110 RGD:5129150 NCBI chr 4:60,048,502...60,050,447
Ensembl chr 4:59,941,517...60,050,298
JBrowse link
G APBA1 amyloid beta precursor protein binding family A member 1 involved_in ISO (MGI:2450068|PMID:12547917), (MGI:3691953|PMID:17167098) SynGO PMID:12547917 PMID:17167098 MGI:2450068 MGI:3691953 NCBI chr 1:87,787,039...87,980,204
Ensembl chr 1:87,786,836...87,980,194
JBrowse link
G APBA2 amyloid beta precursor protein binding family A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,243,086...38,431,491
Ensembl chr 3:38,243,102...38,430,887
JBrowse link
G BACE1 beta-secretase 1 involved_in ISO (MGI:3806404|PMID:18753368) SynGO PMID:18753368 MGI:3806404 NCBI chr 5:16,308,953...16,319,100
Ensembl chr 5:16,308,944...16,319,100
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in ISO (MGI:1340444|PMID:10322048) SynGO PMID:10322048 MGI:1340444 NCBI chr19:52,987,170...53,116,410
Ensembl chr19:52,993,618...53,116,140
Ensembl chr19:52,993,618...53,116,140
JBrowse link
G CALM1 calmodulin 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 8:61,398,231...61,408,874
Ensembl chr 8:61,398,244...61,406,195
JBrowse link
G CALM2 calmodulin 2 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr10:49,299,698...49,314,533
Ensembl chr10:49,299,897...49,314,457
JBrowse link
G CALM3 calmodulin 3 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:109,284,729...109,294,491
Ensembl chr 1:109,286,155...109,294,391
JBrowse link
G CASK calcium/calmodulin dependent serine protein kinase involved_in ISO (MGI:3698294|PMID:17287346) SynGO PMID:17287346 MGI:3698294 NCBI chr  X:35,939,117...36,296,438
Ensembl chr  X:35,940,647...36,297,014
JBrowse link
G CHRM2 cholinergic receptor muscarinic 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:11,515,727...11,665,651
Ensembl chr16:11,515,426...11,664,977
JBrowse link
G CHRNA3 cholinergic receptor nicotinic alpha 3 subunit involved_in ISO PMID:12065717 SynGO PMID:12065717 RGD:13702272 NCBI chr13:38,330,287...38,343,142
Ensembl chr13:38,328,814...38,346,246
JBrowse link
G CHRNA4 cholinergic receptor nicotinic alpha 4 subunit involved_in ISO (MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:2673776 NCBI chr24:47,024,948...47,036,507
Ensembl chr24:47,025,187...47,042,266
JBrowse link
G CHRNA5 cholinergic receptor nicotinic alpha 5 subunit involved_in ISO (MGI:6191866|PMID:19693710) SynGO PMID:19693710 MGI:6191866 NCBI chr13:38,343,966...38,355,534
Ensembl chr13:38,346,104...38,355,468
JBrowse link
G CHRNA6 cholinergic receptor nicotinic alpha 6 subunit involved_in ISO (MGI:2673776|PMID:12944511) SynGO PMID:12944511 MGI:2673776 NCBI chr16:22,990,377...23,009,257
Ensembl chr16:22,990,167...23,009,106
JBrowse link
G CHRNA7 cholinergic receptor nicotinic alpha 7 subunit involved_in ISO PMID:21762741 SynGO PMID:21762741 RGD:13702307 NCBI chr 3:36,852,082...37,164,930
Ensembl chr 3:36,852,543...36,978,399
JBrowse link
G CHRNB2 cholinergic receptor nicotinic beta 2 subunit involved_in ISO (MGI:2673776|PMID:12944511), (MGI:6189689|PMID:11145999) SynGO PMID:11145999 PMID:12944511 MGI:2673776 MGI:6189689 NCBI chr 7:42,786,505...42,797,976
Ensembl chr 7:42,789,600...42,795,722
JBrowse link
G CHRNB3 cholinergic receptor nicotinic beta 3 subunit involved_in ISO (MGI:3028759|PMID:14657161) SynGO PMID:14657161 MGI:3028759 NCBI chr16:23,021,652...23,040,907
Ensembl chr16:23,021,645...23,048,347
JBrowse link
G CSPG5 chondroitin sulfate proteoglycan 5 involved_in ISO (MGI:3583729|PMID:15848802) SynGO PMID:15848802 MGI:3583729 NCBI chr20:41,344,098...41,356,810
Ensembl chr20:41,344,093...41,356,800
JBrowse link
G CYTH1 cytohesin 1 involved_in ISO PMID:9927699 SynGO PMID:9927699 RGD:13702340 NCBI chr 9:2,636,553...2,677,356
Ensembl chr 9:2,605,084...2,675,661
JBrowse link
G DGKI diacylglycerol kinase iota involved_in ISO (MGI:4936793|PMID:21119615) SynGO PMID:21119615 MGI:4936793 NCBI chr16:10,975,394...11,250,430
Ensembl chr16:10,682,935...11,248,029
JBrowse link
G DRD1 dopamine receptor D1 involved_in ISO (MGI:5506871|PMID:22586226) SynGO PMID:22586226 MGI:5506871 NCBI chr 4:37,550,454...37,554,641
Ensembl chr 4:37,549,708...37,553,287
JBrowse link
G DRD2 dopamine receptor D2 involved_in ISO (MGI:2387277|PMID:12223553), (MGI:5506871|PMID:22586226) SynGO PMID:12223553 PMID:22586226 MGI:2387277 MGI:5506871 NCBI chr 5:19,732,842...19,795,241
Ensembl chr 5:19,732,836...19,795,241
JBrowse link
G DRD4 dopamine receptor D4 involved_in ISO PMID:24155292 SynGO PMID:24155292 RGD:13702381
G DTNBP1 dystrobrevin binding protein 1 involved_in ISO (MGI:3797662|PMID:18504299) SynGO PMID:18504299 MGI:3797662 NCBI chr35:14,738,025...14,862,609
Ensembl chr35:14,738,029...14,864,169
JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491
JBrowse link
G FBXL20 F-box and leucine rich repeat protein 20 involved_in ISO (MGI:3765255|PMID:17803915) SynGO PMID:17803915 MGI:3765255 NCBI chr 9:23,021,103...23,122,768
Ensembl chr 9:23,021,468...23,135,297
JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 involved_in ISO (MGI:3654775|PMID:16819522) SynGO PMID:16819522 MGI:3654775 NCBI chr20:48,144,076...48,155,069
Ensembl chr20:48,150,498...48,157,191
JBrowse link
G GIT1 GIT ArfGAP 1 involved_in ISO (MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:5708768 NCBI chr 9:43,676,707...43,686,566
Ensembl chr 9:43,677,899...43,693,177
JBrowse link
G GIT2 GIT ArfGAP 2 involved_in ISO (MGI:5708768|PMID:26637799) SynGO PMID:26637799 MGI:5708768 NCBI chr26:17,170,651...17,217,634
Ensembl chr26:17,170,680...17,214,631
JBrowse link
G GLRA3 glycine receptor alpha 3 involved_in ISO (MGI:5770489|PMID:26851771) SynGO PMID:26851771 MGI:5770489 NCBI chr25:25,098,280...25,305,511
Ensembl chr25:25,131,250...25,305,027
JBrowse link
G GRIN3A glutamate ionotropic receptor NMDA type subunit 3A involved_in ISO (MGI:6109389|PMID:25144876) SynGO PMID:25144876 MGI:6109389 NCBI chr11:58,271,808...58,421,887
Ensembl chr11:58,273,377...58,421,761
JBrowse link
G GRM4 glutamate metabotropic receptor 4 involved_in ISO (MGI:83238|PMID:8815915) SynGO PMID:8815915 MGI:83238 NCBI chr12:3,346,395...3,459,722
Ensembl chr12:3,346,395...3,459,878
JBrowse link
G GRM7 glutamate metabotropic receptor 7 involved_in ISO (MGI:3690146|PMID:12065412) SynGO PMID:12065412 MGI:3690146 NCBI chr20:10,230,568...11,058,693
Ensembl chr20:10,230,557...11,058,703
JBrowse link
G GRM8 glutamate metabotropic receptor 8 involved_in ISO PMID:15275822 SynGO PMID:15275822 RGD:6484726 NCBI chr14:8,982,180...9,719,813
Ensembl chr14:8,983,802...9,719,357
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:23,458,369...23,659,878
Ensembl chr33:23,463,767...23,659,666
JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A involved_in ISO PMID:10381597 SynGO PMID:10381597 RGD:13702211 NCBI chr 2:50,005,277...50,006,548
Ensembl chr 2:50,002,740...50,006,548
JBrowse link
G HTR1B 5-hydroxytryptamine receptor 1B involved_in ISO PMID:17067296 SynGO PMID:17067296 RGD:13702319 NCBI chr12:38,659,088...38,659,546 JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A involved_in ISO PMID:12196574 SynGO PMID:12196574 RGD:13702246 NCBI chr22:4,453,715...4,510,934
Ensembl chr22:4,453,715...4,511,037
JBrowse link
G HTR7 5-hydroxytryptamine receptor 7 involved_in ISO PMID:26779891 SynGO PMID:26779891 RGD:13702205 NCBI chr28:5,438,872...5,524,385
Ensembl chr28:5,440,388...5,524,191
JBrowse link
G KCNH1 potassium voltage-gated channel subfamily H member 1 involved_in ISO (MGI:5917278|PMID:25556795) SynGO PMID:25556795 MGI:5917278 NCBI chr 7:9,317,804...9,631,144
Ensembl chr 7:9,252,488...9,631,150
JBrowse link
G LRRK2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:13,282,824...13,420,917
Ensembl chr27:13,283,756...13,420,870
JBrowse link
G MYO6 myosin VI involved_in ISO (MGI:3654775|PMID:16819522) SynGO PMID:16819522 MGI:3654775 NCBI chr12:37,359,200...37,502,342
Ensembl chr12:37,413,570...37,500,724
JBrowse link
G NCS1 neuronal calcium sensor 1 involved_in ISO PMID:12947410 SynGO PMID:12947410 RGD:13702435 NCBI chr 9:53,661,361...53,676,925
Ensembl chr 9:53,672,910...53,676,910
JBrowse link
G NR3C2 nuclear receptor subfamily 3 group C member 2 involved_in ISO (MGI:3798112|PMID:18547242) SynGO PMID:18547242 MGI:3798112 NCBI chr15:46,390,030...46,718,000
Ensembl chr15:46,390,023...46,710,131
JBrowse link
G NRN1 neuritin 1 involved_in ISO (MGI:5908484|PMID:28475719) SynGO PMID:28475719 MGI:5908484 NCBI chr35:6,070,456...6,079,214
Ensembl chr35:6,070,379...6,078,965
JBrowse link
G NRXN3 neurexin 3 involved_in ISO (MGI:5662329|PMID:26030848) SynGO PMID:26030848 MGI:5662329 NCBI chr 8:50,848,045...51,609,368
Ensembl chr 8:50,850,582...52,383,717
JBrowse link
G P2RX1 purinergic receptor P2X 1 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr 9:47,674,175...47,694,358
Ensembl chr 9:47,675,300...47,688,858
JBrowse link
G P2RX2 purinergic receptor P2X 2 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr26:480,370...485,527
Ensembl chr26:482,425...485,502
JBrowse link
G P2RY1 purinergic receptor P2Y1 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr23:47,249,496...47,253,203
Ensembl chr23:47,249,496...47,253,203
JBrowse link
G P2RY2 purinergic receptor P2Y2 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr21:24,987,568...25,009,754
Ensembl chr21:24,992,848...24,996,059
JBrowse link
G P2RY4 pyrimidinergic receptor P2Y4 involved_in ISO PMID:16000618 SynGO PMID:16000618 RGD:1581702 NCBI chr  X:54,706,404...54,707,512 JBrowse link
G PFN2 profilin 2 acts_upstream_of_or_within
involved_in
ISO (MGI:3714870|PMID:17541406) MGI
SynGO
PMID:17541406 MGI:3714870 NCBI chr23:44,686,126...44,691,801
Ensembl chr23:44,686,937...44,691,800
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 involved_in ISO PMID:23751498 SynGO PMID:23751498 RGD:13702233 NCBI chr15:23,481,370...23,950,412
Ensembl chr15:23,482,549...23,951,141
JBrowse link
G PREPL prolyl endopeptidase like involved_in ISO (PMID:24610330) UniProt PMID:24610330 NCBI chr10:46,733,769...46,792,465
Ensembl chr10:46,726,676...46,792,405
JBrowse link
G PRKCA protein kinase C alpha involved_in ISO (MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:5141567 NCBI chr 9:13,638,106...13,879,571
Ensembl chr 9:13,644,010...13,967,630
JBrowse link
G PRKCB protein kinase C beta involved_in ISO (MGI:5141567|PMID:21658591) SynGO PMID:21658591 MGI:5141567 NCBI chr 6:21,742,970...22,064,360
Ensembl chr 6:21,742,973...22,065,185
JBrowse link
G PRKCE protein kinase C epsilon involved_in ISO PMID:26625935 SynGO PMID:26625935 RGD:11353024 NCBI chr10:47,976,929...48,464,614
Ensembl chr10:47,976,768...48,535,296
JBrowse link
G PRKCG protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,295,110...103,312,562 JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr20:44,796,740...44,802,224
Ensembl chr20:44,796,895...44,801,692
JBrowse link
G RAB5A RAB5A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:23,303,650...23,333,571
Ensembl chr23:23,304,940...23,332,206
JBrowse link
G RIMS3 regulating synaptic membrane exocytosis 3 acts_upstream_of_or_within ISO PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chr15:2,353,876...2,391,742
Ensembl chr15:2,353,693...2,404,431
JBrowse link
G RIMS4 regulating synaptic membrane exocytosis 4 acts_upstream_of_or_within ISO PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chr24:32,199,068...32,256,474
Ensembl chr24:32,203,410...32,256,480
JBrowse link
G SNAPIN SNAP associated protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:43,410,554...43,411,929
Ensembl chr 7:43,410,998...43,412,323
JBrowse link
G STXBP5 syntaxin binding protein 5 involved_in ISO (MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:3814264 NCBI chr 1:38,271,238...38,439,088
Ensembl chr 1:38,271,154...38,434,042
JBrowse link
G STXBP5L syntaxin binding protein 5L involved_in ISO (MGI:6189626|PMID:24744148) SynGO PMID:24744148 MGI:6189626 NCBI chr33:24,320,625...24,702,782
Ensembl chr33:24,320,650...24,697,153
JBrowse link
G SYP synaptophysin involved_in ISO (MGI:1349221|PMID:10595519) SynGO PMID:10595519 MGI:1349221 NCBI chr  X:42,288,071...42,301,802
Ensembl chr  X:42,288,148...42,299,487
JBrowse link
G SYT1 synaptotagmin 1 involved_in ISO PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr15:21,629,061...22,042,734
Ensembl chr15:21,834,763...22,042,732
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,027,877...8,036,773
Ensembl chr30:8,027,128...8,036,153
JBrowse link
G WNT7A Wnt family member 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:4,072,010...4,139,521
Ensembl chr20:4,073,929...4,139,436
JBrowse link
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPLX1 complexin 1 involved_in ISO (MGI:2679622|PMID:11163241) SynGO PMID:11163241 MGI:2679622 NCBI chr 3:91,635,953...91,658,084
Ensembl chr 3:91,638,515...91,656,737
JBrowse link
G CPLX2 complexin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:37,203,003...37,275,938
Ensembl chr 4:37,206,082...37,275,954
JBrowse link
G CPLX3 complexin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,888,770...37,893,168
Ensembl chr30:37,888,076...37,893,182
JBrowse link
G GRIK5 glutamate ionotropic receptor kainate type subunit 5 acts_upstream_of_or_within ISO (MGI:2449894|PMID:12533602) MGI PMID:12533602 MGI:2449894 NCBI chr 1:112,270,157...112,321,672
Ensembl chr 1:112,270,424...112,321,672
JBrowse link
G RAB3A RAB3A, member RAS oncogene family acts_upstream_of_or_within
involved_in
ISO (MGI:3762126|PMID:11359932)
(MGI:3653150|PMID:9194562)
MGI
SynGO
PMID:9194562 PMID:11359932 MGI:3653150 MGI:3762126 NCBI chr20:44,796,740...44,802,224
Ensembl chr20:44,796,895...44,801,692
JBrowse link
regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAPA NSF attachment protein alpha involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4879076|PMID:21040848)
GO_Central
MGI
PMID:21040848 PMID:21873635 MGI:4879076 NCBI chr 1:108,510,920...108,533,317
Ensembl chr 1:108,510,931...108,532,881
JBrowse link
G NAPB NSF attachment protein beta involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4879076|PMID:21040848)
GO_Central
MGI
PMID:21040848 PMID:21873635 MGI:4879076 NCBI chr24:217,287...258,278
Ensembl chr24:217,381...255,752
JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr20:44,796,740...44,802,224
Ensembl chr20:44,796,895...44,801,692
JBrowse link
G STX1A syntaxin 1A involved_in ISO (MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:5521403 NCBI chr 6:6,574,616...6,583,002
Ensembl chr 6:6,574,631...6,581,833
JBrowse link
G STX1B syntaxin 1B involved_in ISO (MGI:5521403|PMID:24133272) ParkinsonsUK-UCL PMID:24133272 MGI:5521403 NCBI chr 6:17,209,972...17,219,903
Ensembl chr 6:17,210,433...17,241,363
JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in ISO PMID:21689256 RGD
UniProt
PMID:19255244 PMID:21689256 RGD:14390056 RGD:2311128 NCBI chr 9:55,690,939...55,768,008
Ensembl chr 9:55,678,264...55,727,680
JBrowse link
G STXBP5 syntaxin binding protein 5 involved_in ISO (MGI:3814264|PMID:18936251) SynGO PMID:18936251 MGI:3814264 NCBI chr 1:38,271,238...38,439,088
Ensembl chr 1:38,271,154...38,434,042
JBrowse link
G UNC13A unc-13 homolog A involved_in ISO PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115
JBrowse link
regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF14 fibroblast growth factor 14 acts_upstream_of_or_within ISO PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chr22:51,379,799...51,983,662
Ensembl chr22:51,380,788...51,982,849
JBrowse link
G VAMP2 vesicle associated membrane protein 2 ISO RGD PMID:21808019 RGD:13506237 NCBI chr 5:32,975,372...32,977,967 JBrowse link
spontaneous exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKACA protein kinase cAMP-activated catalytic subunit alpha involved_in ISO PMID:17190793 UniProt PMID:17190793 RGD:10047304 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669
JBrowse link
G SYT12 synaptotagmin 12 involved_in ISO PMID:17190793 GO_Central PMID:17190793 RGD:10047304 NCBI chr18:50,334,779...50,358,113
Ensembl chr18:50,336,042...50,351,333
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1S2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (MGI:5617942|PMID:20203623) SynGO PMID:20203623 MGI:5617942 NCBI chr  X:12,075,797...12,105,911
Ensembl chr  X:12,076,724...12,103,654
JBrowse link
G AP3B1 adaptor related protein complex 3 subunit beta 1 involved_in ISO (MGI:6189637|PMID:11588176) SynGO PMID:11588176 MGI:6189637 NCBI chr 3:28,481,974...28,748,095
Ensembl chr 3:28,481,038...28,751,258
JBrowse link
G AP3D1 adaptor related protein complex 3 subunit delta 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:56,893,479...56,932,460
Ensembl chr20:56,893,535...56,931,830
JBrowse link
G BTBD8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) SynGO PMID:29262337 MGI:6104538 NCBI chr 6:56,756,682...56,849,849
Ensembl chr 6:56,698,320...56,900,173
JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNM1 dynamin 1 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G DNM3 dynamin 3 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chr 7:26,569,708...27,024,939
Ensembl chr 7:26,574,453...27,024,759
JBrowse link
G SNAP91 synaptosome associated protein 91 involved_in ISO (MGI:5707086|PMID:26412491) SynGO PMID:26412491 MGI:5707086 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in ISO (MGI:2680876|PMID:14622577) SynGO PMID:14622577 MGI:2680876 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G NLGN1 neuroligin 1 involved_in ISO (MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652)
PMID:19628693
PMID:20534458
BHF-UCL PMID:10892652 PMID:12796785 PMID:19628693 PMID:20534458 MGI:2665153 MGI:3694190 RGD:10047242 RGD:8554760 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (MGI:2665153|PMID:12796785) BHF-UCL PMID:12796785 MGI:2665153 NCBI chr10:51,555,660...52,666,774
Ensembl chr10:51,558,452...52,667,569
JBrowse link
G PCLO piccolo presynaptic cytomatrix protein involved_in ISO (MGI:4442284|PMID:20332206) SynGO PMID:20332206 MGI:4442284 NCBI chr18:22,385,102...22,701,944
Ensembl chr18:22,385,100...22,706,793
JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in ISO (MGI:4830800|PMID:20338242) UniProt PMID:20338242 MGI:4830800 NCBI chr20:44,796,740...44,802,224
Ensembl chr20:44,796,895...44,801,692
JBrowse link
G SYN1 synapsin I involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:41,191,571...41,241,557
Ensembl chr  X:41,191,571...41,241,640
JBrowse link
G SYN2 synapsin II involved_in ISO (MGI:3831450|PMID:18945891), (MGI:4830800|PMID:20338242) SynGO PMID:18945891 PMID:20338242 MGI:3831450 MGI:4830800 NCBI chr20:6,368,348...6,569,355
Ensembl chr20:6,369,122...6,568,508
JBrowse link
G SYN3 synapsin III involved_in ISO (MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:2180939 NCBI chr10:30,475,134...30,927,758
Ensembl chr10:30,482,870...30,923,257
JBrowse link
G SYNDIG1 synapse differentiation inducing 1 involved_in ISO PMID:20152115 UniProt PMID:20152115 RGD:8554654 NCBI chr23:759,787...865,659
Ensembl chr23:685,782...865,359
JBrowse link
synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK1 BR serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:102,367,050...102,384,942
Ensembl chr 1:102,367,581...102,385,466
JBrowse link
G STXBP5 syntaxin binding protein 5 involved_in ISO PMID:27807164 SynGO PMID:27807164 RGD:13702312 NCBI chr 1:38,271,238...38,439,088
Ensembl chr 1:38,271,154...38,434,042
JBrowse link
G SYN1 synapsin I involved_in ISO (MGI:63816|PMID:7902212) SynGO PMID:7902212 MGI:63816 NCBI chr  X:41,191,571...41,241,557
Ensembl chr  X:41,191,571...41,241,640
JBrowse link
G SYN2 synapsin II involved_in ISO (MGI:74599|PMID:7777057) SynGO PMID:7777057 MGI:74599 NCBI chr20:6,368,348...6,569,355
Ensembl chr20:6,369,122...6,568,508
JBrowse link
G SYN3 synapsin III involved_in ISO (MGI:2180939|PMID:12040043) SynGO PMID:12040043 MGI:2180939 NCBI chr10:30,475,134...30,927,758
Ensembl chr10:30,482,870...30,923,257
JBrowse link
synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTBP2 C-terminal binding protein 2 involved_in ISO (MGI:5784793|PMID:26929012) SynGO PMID:26929012 MGI:5784793 NCBI chr28:34,259,912...34,415,113
Ensembl chr28:34,260,856...34,415,696
JBrowse link
G PPFIA3 PTPRF interacting protein alpha 3 involved_in ISO (MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:6120581 NCBI chr 1:107,308,903...107,327,300
Ensembl chr 1:107,319,427...107,331,463
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 involved_in ISO (MGI:4939085|PMID:21241895) SynGO PMID:21241895 MGI:4939085 NCBI chr12:34,473,974...34,661,893
Ensembl chr12:34,474,033...34,659,410
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 involved_in ISO (MGI:4939085|PMID:21241895) SynGO PMID:21241895 MGI:4939085 NCBI chr13:4,928,518...5,499,258
Ensembl chr13:4,927,121...5,496,629
JBrowse link
G STX1A syntaxin 1A involved_in ISO PMID:1321498 UniProt PMID:1321498 RGD:8553325 NCBI chr 6:6,574,616...6,583,002
Ensembl chr 6:6,574,631...6,581,833
JBrowse link
G STX1B syntaxin 1B involved_in ISO (MGI:5603022|PMID:24587181)
(MGI:5521403|PMID:24133272)
ParkinsonsUK-UCL PMID:24133272 PMID:24587181 MGI:5521403 MGI:5603022 NCBI chr 6:17,209,972...17,219,903
Ensembl chr 6:17,210,433...17,241,363
JBrowse link
G STX4 syntaxin 4 ISO RGD PMID:7690687 RGD:68313 NCBI chr 6:17,184,044...17,189,481
Ensembl chr 6:17,184,399...17,189,370
JBrowse link
G SYDE1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO (MGI:5515279|PMID:23791195) MGI PMID:23791195 MGI:5515279 NCBI chr20:47,021,789...47,028,606
Ensembl chr20:47,021,775...47,028,714
JBrowse link
G UNC13A unc-13 homolog A acts_upstream_of_or_within ISO (MGI:4354715|PMID:19558619) MGI PMID:19558619 MGI:4354715 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115
JBrowse link
G UNC13B unc-13 homolog B acts_upstream_of_or_within ISO (MGI:4354715|PMID:19558619) MGI PMID:19558619 MGI:4354715 NCBI chr11:51,707,968...51,941,148
Ensembl chr11:51,708,302...51,940,955
JBrowse link
G VAMP2 vesicle associated membrane protein 2 involved_in ISO (MGI:5617001|PMID:25374362) SynGO PMID:25374362 MGI:5617001 NCBI chr 5:32,975,372...32,977,967 JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTB actin beta involved_in ISO (MGI:6189485|PMID:27840001) SynGO PMID:27840001 MGI:6189485 NCBI chr 6:12,421,006...12,424,449
Ensembl chr 6:12,418,932...12,462,845
JBrowse link
G ACTG1 actin gamma 1 involved_in ISO (MGI:6189485|PMID:27840001) SynGO PMID:27840001 MGI:6189485 NCBI chr 9:635,978...638,328
Ensembl chr 9:635,978...638,328
JBrowse link
G AMPH amphiphysin acts_upstream_of_or_within
involved_in
ISO (MGI:2176305|PMID:11879655) MGI
SynGO
PMID:11879655 MGI:2176305 NCBI chr18:11,132,078...11,261,847
Ensembl chr18:11,143,446...11,260,841
JBrowse link
G AP2B1 adaptor related protein complex 2 subunit beta 1 involved_in ISO (PMID:11102472) SynGO PMID:11102472 NCBI chr 9:37,946,761...38,078,074
Ensembl chr 9:37,946,788...38,078,041
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 involved_in ISO PMID:19321783 SynGO PMID:19321783 RGD:12050109 NCBI chr34:17,071,199...17,080,445
Ensembl chr34:17,071,235...17,080,445
JBrowse link
G ARF6 ADP ribosylation factor 6 involved_in ISO PMID:26731518 SynGO PMID:26731518 RGD:11556875 NCBI chr 8:26,445,407...26,449,430
Ensembl chr 8:26,445,647...26,525,530
JBrowse link
G BIN1 bridging integrator 1 involved_in ISO PMID:9348539 SynGO PMID:9348539 RGD:631926 NCBI chr19:23,503,934...23,534,407
Ensembl chr19:23,375,363...23,534,303
JBrowse link
G BTBD8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) SynGO PMID:29262337 MGI:6104538 NCBI chr 6:56,756,682...56,849,849
Ensembl chr 6:56,698,320...56,900,173
JBrowse link
G CANX calnexin involved_in ISS UniProt GO_REF:0000024 NCBI chr11:1,966,612...1,998,620
Ensembl chr11:1,927,888...1,998,604
JBrowse link
G CD24 CD24 molecule acts_upstream_of_or_within ISO (MGI:3625625|PMID:16606832) MGI PMID:16606832 MGI:3625625 NCBI chr12:64,239,957...64,245,114 JBrowse link
G CDK5 cyclin dependent kinase 5 ISO RGD PMID:12855954 RGD:1358501 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269
JBrowse link
G CLTC clathrin heavy chain involved_in ISO PMID:16982422 SynGO PMID:16982422 RGD:13702168 NCBI chr 9:34,116,344...34,183,023
Ensembl chr 9:34,116,634...34,182,719
JBrowse link
G DENND1A DENN domain containing 1A acts_upstream_of_or_within ISO (MGI:3694831|PMID:17182770) MGI PMID:17182770 MGI:3694831 NCBI chr 9:58,918,699...59,424,685
Ensembl chr 9:58,919,265...59,424,684
JBrowse link
G DNM1 dynamin 1 involved_in ISO (MGI:3709249|PMID:17463283) SynGO PMID:17463283 MGI:3709249 NCBI chr 9:55,252,802...55,298,244
Ensembl chr 9:55,252,347...55,298,244
JBrowse link
G DNM1L dynamin 1 like involved_in ISO PMID:23792689 SynGO PMID:23792689 RGD:12793033 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
G DNM2 dynamin 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:50,398,866...50,487,303
Ensembl chr20:50,398,864...50,487,241
JBrowse link
G DNM3 dynamin 3 involved_in ISO (MGI:5285027|PMID:21689597) SynGO PMID:21689597 MGI:5285027 NCBI chr 7:26,569,708...27,024,939
Ensembl chr 7:26,574,453...27,024,759
JBrowse link
G FCHO2 FCH and mu domain containing endocytic adaptor 2 involved_in ISO PMID:20448150
(MGI:5320276|PMID:20448150)
SynGO
ParkinsonsUK-UCL
PMID:20448150 MGI:5320276 RGD:12050101 NCBI chr 2:55,905,497...56,011,395
Ensembl chr 2:55,905,520...56,009,131
JBrowse link
G GRN granulin precursor ISO RGD PMID:21813674 RGD:5509044 NCBI chr 9:19,077,430...19,085,443
Ensembl chr 9:19,077,427...19,082,268
JBrowse link
G ITSN1 intersectin 1 involved_in ISO (MGI:3811659|PMID:18676989) SynGO PMID:18676989 MGI:3811659 NCBI chr31:29,144,754...29,360,134 JBrowse link
G KIAA1109 KIAA1109 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:17,841,450...18,047,002
Ensembl chr19:17,841,967...18,044,276
JBrowse link
G NLGN4X neuroligin 4 X-linked involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:3,409,529...3,708,234 JBrowse link
G OPHN1 oligophrenin 1 acts_upstream_of_or_within ISO (MGI:4359148|PMID:19481455) MGI PMID:19481455 MGI:4359148 NCBI chr  X:52,418,390...52,983,155
Ensembl chr  X:52,455,373...52,982,244
JBrowse link
G PACSIN1 protein kinase C and casein kinase substrate in neurons 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:3,754,075...3,811,717
Ensembl chr12:3,753,717...3,809,986
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein involved_in ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chr21:13,437,819...13,540,167
Ensembl chr21:13,437,925...13,539,616
JBrowse link
G RAB27B RAB27B, member RAS oncogene family involved_in ISO PMID:20926670 SynGO PMID:20926670 RGD:13432355 NCBI chr 1:20,695,100...20,832,745
Ensembl chr 1:20,700,514...20,832,975
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) SynGO PMID:19458197 MGI:4365512 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in
acts_upstream_of_or_within
ISO PMID:22099461
(MGI:4359148|PMID:19481455)
SynGO
MGI
PMID:19481455 PMID:22099461 MGI:4359148 RGD:13702445 NCBI chr11:37,720,793...37,769,027
Ensembl chr11:37,577,053...37,767,572
JBrowse link
G SNAP91 synaptosome associated protein 91 involved_in ISO PMID:21808019 SynGO PMID:21808019 RGD:13506237 NCBI chr12:43,919,925...44,058,315
Ensembl chr12:43,919,925...44,058,616
JBrowse link
G SNCA synuclein alpha involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383
JBrowse link
G SNCB synuclein beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:36,710,236...36,719,455
Ensembl chr 4:36,616,039...36,764,501
JBrowse link
G STON2 stonin 2 involved_in ISO PMID:22727701
(PMID:21102408)
SynGO
UniProt
PMID:21102408 PMID:22727701 RGD:12050122 NCBI chr 8:53,591,194...53,725,710
Ensembl chr 8:53,597,780...53,725,688
JBrowse link
G STX1A syntaxin 1A involved_in ISO (PMID:26635000) UniProt PMID:26635000 NCBI chr 6:6,574,616...6,583,002
Ensembl chr 6:6,574,631...6,581,833
JBrowse link
G SYNJ1 synaptojanin 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3797309|PMID:18093523)
(PMID:18093523)
MGI
ParkinsonsUK-UCL
PMID:18093523 MGI:3797309 NCBI chr31:27,308,169...27,399,226
Ensembl chr31:27,308,169...27,399,197
JBrowse link
G SYP synaptophysin involved_in ISO (MGI:5141572|PMID:21658579) SynGO PMID:21658579 MGI:5141572 NCBI chr  X:42,288,071...42,301,802
Ensembl chr  X:42,288,148...42,299,487
JBrowse link
G SYT5 synaptotagmin 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:102,456,767...102,463,750
Ensembl chr 1:102,456,782...102,463,749
JBrowse link
G TBC1D24 TBC1 domain family member 24 acts_upstream_of_or_within ISO (MGI:6279048|PMID:30335140) MGI PMID:30335140 MGI:6279048 NCBI chr 6:38,531,547...38,557,472 JBrowse link
G VAMP2 vesicle associated membrane protein 2 involved_in ISO (MGI:3573806|PMID:15475946) UniProt PMID:15475946 MGI:3573806 NCBI chr 5:32,975,372...32,977,967 JBrowse link
synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPLX1 complexin 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11751907 PMID:21873635 RGD:727333 NCBI chr 3:91,635,953...91,658,084
Ensembl chr 3:91,638,515...91,656,737
JBrowse link
G CPLX2 complexin 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11751907 PMID:21873635 RGD:727333 NCBI chr 4:37,203,003...37,275,938
Ensembl chr 4:37,206,082...37,275,954
JBrowse link
G CPLX3 complexin 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:37,888,770...37,893,168
Ensembl chr30:37,888,076...37,893,182
JBrowse link
G DOC2A double C2 domain alpha ISO RGD PMID:10651871 RGD:1357914 NCBI chr 6:18,041,551...18,046,779
Ensembl chr 6:18,041,296...18,046,265
JBrowse link
G OTOF otoferlin acts_upstream_of_or_within
involved_in
ISO (MGI:5660467|PMID:25609709)
(MGI:3774237|PMID:18287496)
(MGI:3692845|PMID:17055430)
MGI
UniProt
PMID:17055430 PMID:18287496 PMID:25609709 MGI:3692845 MGI:3774237 MGI:5660467 NCBI chr17:20,518,480...20,619,713
Ensembl chr17:20,518,813...20,614,750
JBrowse link
G P2RX7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (MGI:3529714|PMID:15713258) MGI PMID:15713258 MGI:3529714 NCBI chr26:7,928,863...7,983,956
Ensembl chr26:7,940,985...7,983,740
JBrowse link
G PPFIA3 PTPRF interacting protein alpha 3 involved_in ISO (MGI:6120581|PMID:29439199) SynGO PMID:29439199 MGI:6120581 NCBI chr 1:107,308,903...107,327,300
Ensembl chr 1:107,319,427...107,331,463
JBrowse link
G RAB3A RAB3A, member RAS oncogene family acts_upstream_of_or_within
involved_in
ISO (MGI:3762126|PMID:11359932)
PMID:16141272
MGI
ParkinsonsUK-UCL
PMID:11359932 PMID:16141272 MGI:3762126 RGD:8693376 NCBI chr20:44,796,740...44,802,224
Ensembl chr20:44,796,895...44,801,692
JBrowse link
G SNAP25 synaptosome associated protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:12,003,005...12,081,385
Ensembl chr24:12,004,117...12,081,329
JBrowse link
G SNAPIN SNAP associated protein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:10195194)
GO_Central
MGI
PMID:10195194 PMID:21873635 NCBI chr 7:43,410,554...43,411,929
Ensembl chr 7:43,410,998...43,412,323
JBrowse link
G SNCA synuclein alpha involved_in ISO (PMID:28288128) UniProt PMID:28288128 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383
JBrowse link
G SPTBN2 spectrin beta, non-erythrocytic 2 involved_in ISO PMID:9826670 UniProt PMID:9826670 RGD:8553838 NCBI chr18:50,631,053...50,670,428
Ensembl chr18:50,631,909...50,669,916
JBrowse link
G STX1A syntaxin 1A involved_in ISO PMID:7901002
(MGI:5790510|PMID:27466336)
(PMID:26635000)
SynGO
UniProt
PMID:7901002 PMID:26635000 PMID:27466336 MGI:5790510 RGD:13702440 NCBI chr 6:6,574,616...6,583,002
Ensembl chr 6:6,574,631...6,581,833
JBrowse link
G STX1B syntaxin 1B involved_in ISO (MGI:5790510|PMID:27466336) SynGO PMID:27466336 MGI:5790510 NCBI chr 6:17,209,972...17,219,903
Ensembl chr 6:17,210,433...17,241,363
JBrowse link
G SYT1 synaptotagmin 1 acts_upstream_of_or_within ISO (MGI:4879076|PMID:21040848) MGI PMID:21040848 MGI:4879076 NCBI chr15:21,629,061...22,042,734
Ensembl chr15:21,834,763...22,042,732
JBrowse link
G SYT10 synaptotagmin 10 NOT|involved_in ISO (MGI:5751674|PMID:21496647) UniProt PMID:21496647 MGI:5751674 NCBI chr27:15,593,709...15,657,184
Ensembl chr27:15,593,649...15,687,920
JBrowse link
G TRIM9 tripartite motif containing 9 ISO RGD PMID:11524423 RGD:631246 NCBI chr 8:27,334,045...27,441,238
Ensembl chr 8:27,336,063...27,441,445
JBrowse link
G UNC13A unc-13 homolog A involved_in ISO (MGI:1341485|PMID:10440375) SynGO PMID:10440375 MGI:1341485 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115
JBrowse link
G UNC13B unc-13 homolog B involved_in ISO (MGI:5795822|PMID:19700493) SynGO PMID:19700493 MGI:5795822 NCBI chr11:51,707,968...51,941,148
Ensembl chr11:51,708,302...51,940,955
JBrowse link
G UNC13C unc-13 homolog C involved_in ISO (MGI:1929572|PMID:11150314) SynGO PMID:11150314 MGI:1929572 NCBI chr30:19,519,177...20,096,633
Ensembl chr30:19,518,232...20,095,094
JBrowse link
G VAMP2 vesicle associated membrane protein 2 involved_in
acts_upstream_of_or_within
ISO PMID:1331807
(MGI:2153431|PMID:11691998)
(MGI:3573806|PMID:15475946)
SynGO
MGI
UniProt
PMID:1331807 PMID:11691998 PMID:15475946 MGI:2153431 MGI:3573806 RGD:13702243 NCBI chr 5:32,975,372...32,977,967 JBrowse link
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MVP major vault protein involved_in ISO (MGI:5792766|PMID:27052163) UniProt PMID:27052163 MGI:5792766 NCBI chr 6:17,872,670...17,877,502
Ensembl chr 6:17,873,521...17,903,184
JBrowse link
G SNAP23 synaptosome associated protein 23 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:9,453,931...9,493,506
Ensembl chr30:9,456,084...9,492,329
JBrowse link
G SNAP25 synaptosome associated protein 25 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:12,003,005...12,081,385
Ensembl chr24:12,004,117...12,081,329
JBrowse link
G SNAP29 synaptosome associated protein 29 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:30,606,195...30,630,441
Ensembl chr26:30,609,158...30,630,262
JBrowse link
G SNAPIN SNAP associated protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4430710|PMID:19217378) Ensembl
MGI
PMID:19217378 GO_REF:0000107 MGI:4430710 NCBI chr 7:43,410,554...43,411,929
Ensembl chr 7:43,410,998...43,412,323
JBrowse link
G STX11 syntaxin 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:35,600,440...35,645,421
Ensembl chr 1:35,601,133...35,644,819
JBrowse link
G STX19 syntaxin 19 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr33:1,726,019...1,736,949
Ensembl chr33:1,726,695...1,727,579
JBrowse link
G STX1A syntaxin 1A involved_in ISO PMID:18703708 SynGO PMID:18703708 RGD:11535099 NCBI chr 6:6,574,616...6,583,002
Ensembl chr 6:6,574,631...6,581,833
JBrowse link
G STX1B syntaxin 1B involved_in ISO (MGI:3803800|PMID:18703708), (MGI:5603022|PMID:24587181)
(MGI:5603022|PMID:24587181)
SynGO PMID:18703708 PMID:24587181 MGI:3803800 MGI:5603022 NCBI chr 6:17,209,972...17,219,903
Ensembl chr 6:17,210,433...17,241,363
JBrowse link
G STX4 syntaxin 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,184,044...17,189,481
Ensembl chr 6:17,184,399...17,189,370
JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLCN3 chloride voltage-gated channel 3 acts_upstream_of_or_within
involved_in
ISO (MGI:5006894|PMID:21378974)
(MGI:2182197|PMID:11182090)
MGI
SynGO
PMID:11182090 PMID:21378974 MGI:2182197 MGI:5006894 NCBI chr25:20,528,708...20,616,687
Ensembl chr25:20,528,699...20,615,070
JBrowse link
G SLC17A7 solute carrier family 17 member 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3836822|PMID:19169251) Ensembl
MGI
PMID:19169251 GO_REF:0000107 MGI:3836822 NCBI chr 1:107,054,242...107,064,444
Ensembl chr 1:107,054,410...107,063,550
JBrowse link
synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CADPS calcium dependent secretion activator acts_upstream_of_or_within
involved_in
ISO (MGI:4879076|PMID:21040848)
(MGI:5617001|PMID:25374362)
(MGI:3773298|PMID:18022372)
MGI
SynGO
PMID:18022372 PMID:21040848 PMID:25374362 MGI:3773298 MGI:4879076 MGI:5617001 NCBI chr20:28,221,150...28,680,844
Ensembl chr20:28,221,843...28,680,131
JBrowse link
G CADPS2 calcium dependent secretion activator 2 involved_in
acts_upstream_of_or_within
ISO (MGI:5617001|PMID:25374362)
(MGI:6189303|PMID:25437547)
(MGI:4879076|PMID:21040848)
SynGO
MGI
PMID:21040848 PMID:25374362 PMID:25437547 MGI:4879076 MGI:5617001 MGI:6189303 NCBI chr14:60,109,253...60,465,982
Ensembl chr14:60,107,538...60,556,817
JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 involved_in ISO (MGI:5882646|PMID:27253063) SynGO PMID:27253063 MGI:5882646 NCBI chr27:43,004,243...43,544,260
Ensembl chr27:43,038,544...43,678,843
JBrowse link
G ERC2 ELKS/RAB6-interacting/CAST family member 2 involved_in ISO (MGI:4415657|PMID:19874790) SynGO PMID:19874790 MGI:4415657 NCBI chr20:33,842,753...34,748,038
Ensembl chr20:33,842,753...34,746,491
JBrowse link
G NAPA NSF attachment protein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,510,920...108,533,317
Ensembl chr 1:108,510,931...108,532,881
JBrowse link
G OTOF otoferlin involved_in ISO (MGI:4461353|PMID:20562868) CACAO PMID:20562868 MGI:4461353 NCBI chr17:20,518,480...20,619,713
Ensembl chr17:20,518,813...20,614,750
JBrowse link
G RIMS1 regulating synaptic membrane exocytosis 1 involved_in ISO (MGI:4887275|PMID:21262469), (MGI:5432438|PMID:22753485) SynGO PMID:21262469 PMID:22753485 MGI:4887275 MGI:5432438 NCBI chr12:34,473,974...34,661,893
Ensembl chr12:34,474,033...34,659,410
JBrowse link
G RIMS2 regulating synaptic membrane exocytosis 2 involved_in ISO (MGI:5432438|PMID:22753485) SynGO PMID:22753485 MGI:5432438 NCBI chr13:4,928,518...5,499,258
Ensembl chr13:4,927,121...5,496,629
JBrowse link
G SNAP23 synaptosome associated protein 23 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:9,453,931...9,493,506
Ensembl chr30:9,456,084...9,492,329
JBrowse link
G SNAP25 synaptosome associated protein 25 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:12,003,005...12,081,385
Ensembl chr24:12,004,117...12,081,329
JBrowse link
G SNAP29 synaptosome associated protein 29 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:30,606,195...30,630,441
Ensembl chr26:30,609,158...30,630,262
JBrowse link
G SNCA synuclein alpha involved_in ISO (PMID:30404828) UniProt PMID:30404828 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383
JBrowse link
G STXBP1 syntaxin binding protein 1 involved_in ISO (MGI:3695670|PMID:17110441) SynGO PMID:17110441 MGI:3695670 NCBI chr 9:55,690,939...55,768,008
Ensembl chr 9:55,678,264...55,727,680
JBrowse link
G SV2A synaptic vesicle glycoprotein 2A involved_in ISO (MGI:3831988|PMID:19176798) SynGO PMID:19176798 MGI:3831988 NCBI chr17:59,185,715...59,195,888
Ensembl chr17:59,187,244...59,195,888
JBrowse link
G SYNJ1 synaptojanin 1 acts_upstream_of_or_within ISO (MGI:2447947|PMID:12481038) MGI PMID:12481038 MGI:2447947 NCBI chr31:27,308,169...27,399,226
Ensembl chr31:27,308,169...27,399,197
JBrowse link
G UNC13A unc-13 homolog A involved_in ISO (MGI:2158113|PMID:11832228)
(MGI:5617001|PMID:25374362)
RGD
ParkinsonsUK-UCL
SynGO
PMID:11832228 PMID:21499244 PMID:25374362 MGI:2158113 MGI:5617001 RGD:5686389 NCBI chr20:45,179,275...45,237,544
Ensembl chr20:45,188,750...45,238,115
JBrowse link
G UNC13B unc-13 homolog B acts_upstream_of_or_within
involved_in
ISO (MGI:2181453|PMID:12070347)
(MGI:2158113|PMID:11832228)
PMID:22966208
(MGI:5617001|PMID:25374362)
MGI
ParkinsonsUK-UCL
SynGO
PMID:11832228 PMID:12070347 PMID:22966208 PMID:25374362 MGI:2158113 MGI:2181453 MGI:5617001 RGD:11535109 NCBI chr11:51,707,968...51,941,148
Ensembl chr11:51,708,302...51,940,955
JBrowse link
G UNC13C unc-13 homolog C involved_in ISO PMID:22966208 ParkinsonsUK-UCL PMID:22966208 RGD:11535109 NCBI chr30:19,519,177...20,096,633
Ensembl chr30:19,518,232...20,095,094
JBrowse link
synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1S2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO (MGI:5617942|PMID:20203623) MGI PMID:20203623 MGI:5617942 NCBI chr  X:12,075,797...12,105,911
Ensembl chr  X:12,076,724...12,103,654
JBrowse link
G RAB3A RAB3A, member RAS oncogene family involved_in ISO PMID:16141272 ParkinsonsUK-UCL PMID:16141272 RGD:8693376 NCBI chr20:44,796,740...44,802,224
Ensembl chr20:44,796,895...44,801,692
JBrowse link
G RAB5A RAB5A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:23,303,650...23,333,571
Ensembl chr23:23,304,940...23,332,206
JBrowse link
G SYT7 synaptotagmin 7 involved_in ISO (MGI:5560382|PMID:24569478) UniProt PMID:24569478 MGI:5560382 NCBI chr18:54,863,072...54,926,121
Ensembl chr18:54,861,754...54,921,367
JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G BTBD8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) UniProt PMID:29262337 MGI:6104538 NCBI chr 6:56,756,682...56,849,849
Ensembl chr 6:56,698,320...56,900,173
JBrowse link
G DNM1L dynamin 1 like involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr27:16,161,855...16,211,983
Ensembl chr27:16,163,357...16,211,957
JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLGN1 neuroligin 1 involved_in ISO (MGI:3694190|PMID:10892652) UniProt PMID:10892652 MGI:3694190 NCBI chr34:37,397,772...38,203,634
Ensembl chr34:37,572,629...38,203,177
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2664026|PMID:12805290) Ensembl
MGI
PMID:12805290 GO_REF:0000107 MGI:2664026 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) UniProt PMID:19458197 MGI:4365512 NCBI chr13:37,356,405...37,374,765
Ensembl chr13:37,356,405...37,374,681
JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJC6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:44,882,111...45,021,152
Ensembl chr 5:44,884,283...45,120,203
JBrowse link
G SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in ISO (MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:5300660 NCBI chr20:55,279,622...55,311,579
Ensembl chr20:55,279,621...55,311,536
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO (MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:5300660 NCBI chr11:37,720,793...37,769,027
Ensembl chr11:37,577,053...37,767,572
JBrowse link
G SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in ISO (MGI:5300660|PMID:22099461) SynGO PMID:22099461 MGI:5300660 NCBI chr 3:55,287,460...55,340,736
Ensembl chr 3:55,287,460...55,340,571
JBrowse link
G SYNJ1 synaptojanin 1 involved_in
acts_upstream_of_or_within
ISO (MGI:1346710|PMID:10535736)
(MGI:1346710|PMID:10535736), (MGI:5300660|PMID:22099461)
(MGI:2447947|PMID:12481038)
SynGO
MGI
PMID:10535736 PMID:12481038 PMID:22099461 MGI:1346710 MGI:2447947 MGI:5300660 NCBI chr31:27,308,169...27,399,226
Ensembl chr31:27,308,169...27,399,197
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13875
    cellular process 13120
      vesicle-mediated transport 1291
        vesicle-mediated transport in synapse 256
          endocytosed synaptic vesicle processing via endosome 0
          postsynaptic dense core vesicle exocytosis + 0
          postsynaptic endocytosis + 30
          presynaptic endocytosis + 62
          synaptic vesicle budding from endosome 4
          synaptic vesicle cycle + 225
          synaptic vesicle exocytosis + 139
Path 2
Term Annotations click to browse term
  biological_process 13875
    localization 5411
      establishment of localization 3938
        transport 3775
          vesicle-mediated transport 1291
            vesicle-mediated transport in synapse 256
              endocytosed synaptic vesicle processing via endosome 0
              postsynaptic dense core vesicle exocytosis + 0
              postsynaptic endocytosis + 30
              presynaptic endocytosis + 62
              synaptic vesicle budding from endosome 4
              synaptic vesicle cycle + 225
              synaptic vesicle exocytosis + 139
paths to the root