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ONTOLOGY REPORT - ANNOTATIONS


Term:vesicle-mediated transport in synapse
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Accession:GO:0099003 term browser browse the term
Definition:Any vesicle-mediated transport that occurs in a synapse.



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vesicle-mediated transport in synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in ISO (MGI:5819335|PMID:24217640) RGD PMID:24217640 MGI:5819335 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Clstn1 calsyntenin 1 involved_in ISO (MGI:5581343|PMID:24966372) RGD PMID:24966372 MGI:5581343 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583
JBrowse link
G Cplx1 complexin 1 involved_in ISO (MGI:5315203|PMID:22284181) RGD PMID:22284181 MGI:5315203 NCBI chr14:1,184,638...1,216,392 JBrowse link
G Grip1 glutamate receptor interacting protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4840152|PMID:20956289)
Ensembl
RGD
PMID:20956289 GO_REF:0000107 MGI:4840152 NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in ISO (MGI:4840152|PMID:20956289) RGD PMID:20956289 MGI:4840152 NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
JBrowse link
G Mapk10 mitogen activated protein kinase 10 involved_in IDA
IMP
EXP
PMID:23838184 SynGO PMID:23838184 PMID:23838184 PMID:23838184 RGD:13702338, RGD:13702338, RGD:13702338 NCBI chr14:6,497,662...6,790,109
Ensembl chr14:6,497,707...6,786,201
JBrowse link
G Myo5b myosin Vb involved_in IMP
IDA
PMID:18984164 SynGO PMID:18984164 PMID:18984164 RGD:11533643, RGD:11533643 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Nsg1 neuronal vesicle trafficking associated 1 involved_in ISO (MGI:5819354|PMID:16037816) RGD PMID:16037816 MGI:5819354 NCBI chr14:72,648,771...72,670,521
Ensembl chr14:72,648,741...72,670,514
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in IDA
IMP
PMID:18045925 SynGO PMID:18045925 PMID:18045925 RGD:2306457, RGD:2306457 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in IMP
IDA
PMID:15297461
PMID:18045925
SynGO PMID:15297461 PMID:18045925 PMID:15297461 PMID:18045925 RGD:2306456, RGD:2306457, RGD:2306456, RGD:2306457 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G Scrib scribble planar cell polarity protein involved_in IDA
IMP
PMID:25310985 SynGO PMID:25310985 PMID:25310985 RGD:12050130, RGD:12050130 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Snap23 synaptosome associated protein 23 involved_in IDA
IMP
PMID:26839408 SynGO PMID:26839408 PMID:26839408 RGD:12050145, RGD:12050145 NCBI chr 3:107,514,088...107,546,177 JBrowse link
G Snap47 synaptosome associated protein 47 involved_in ISO (MGI:5494785|PMID:23395379) RGD PMID:23395379 MGI:5494785 NCBI chr10:44,192,886...44,234,435
Ensembl chr10:44,191,218...44,234,424
JBrowse link
G Stx3 syntaxin 3 involved_in ISO (MGI:5494785|PMID:23395379) RGD PMID:23395379 MGI:5494785 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
JBrowse link
G Stx4 syntaxin 4 involved_in IDA
IMP
PMID:20434989 SynGO PMID:20434989 PMID:20434989 RGD:13702188, RGD:13702188 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:6114586|PMID:28384478) RGD PMID:28384478 MGI:6114586 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
aminergic neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase IDA RGD PMID:19903816 RGD:5128868 NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208
JBrowse link
G Slc18a1 solute carrier family 18 member A1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:20,653,268...20,687,051
Ensembl chr16:20,653,508...20,687,051
JBrowse link
G Slc18a2 solute carrier family 18 member A2 involved_in TAS
IBA
IMP
PMID:21873635 RGD
GO_Central
PMID:1505023 PMID:21873635 PMID:19903816 RGD:729674, RGD:13792537, RGD:5128868 NCBI chr 1:258,413,748...258,449,143
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Th tyrosine hydroxylase IDA RGD PMID:19903816 RGD:5128868 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
calcium ion-regulated exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209 (MGI:1353373|PMID:10670432) RGD PMID:10670432 MGI:1353373 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225
JBrowse link
G Doc2b double C2 domain beta involved_in IDA
ISO
IEA
PMID:20150444
(MGI:4439222|PMID:20150444)
GO_REF:0000107
RGD
Ensembl
PMID:20150444 PMID:20150444 GO_REF:0000107 MGI:4439222, RGD:8554647 NCBI chr10:60,628,029...60,653,267
Ensembl chr10:60,628,029...60,653,267
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2152972 (MGI:3703478|PMID:17124501)
RGD PMID:17124501 PMID:21873635 MGI:3703478, RGD:13792537 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
MGI:2152971 (MGI:3703478|PMID:17124501)
PMID:21873635
ParkinsonsUK-UCL
RGD
PMID:17124501 PMID:21873635 GO_REF:0000024 MGI:3703478, RGD:13792537 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
JBrowse link
G Snap25 synaptosome associated protein 25 IDA RGD PMID:14980208 RGD:1581082 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:3803800|PMID:18703708) RGD PMID:18703708 MGI:3803800 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Syt1 synaptotagmin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1857252 (MGI:5141208|PMID:21521611)
RGD PMID:21521611 PMID:21873635 MGI:5141208, RGD:13792537 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt2 synaptotagmin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt5 synaptotagmin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5707519|PMID:26738595)
UniProt
RGD
PMID:26738595 GO_REF:0000024 MGI:5707519 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Syt8 synaptotagmin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
calcium-dependent activation of synaptic vesicle fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prrt2 proline-rich transmembrane protein 2 involved_in ISO (MGI:5792766|PMID:27052163) RGD PMID:27052163 MGI:5792766 NCBI chr 1:181,625,243...181,628,905
Ensembl chr 1:181,604,545...181,628,850
JBrowse link
G Syt1 synaptotagmin 1 involved_in ISO (MGI:69538|PMID:7954835) RGD PMID:7954835 MGI:69538 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt2 synaptotagmin 2 involved_in ISO (MGI:3695515|PMID:17192432) RGD PMID:17192432 MGI:3695515 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:5554634|PMID:24267651) RGD PMID:24267651 MGI:5554634 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Syt9 synaptotagmin 9 involved_in ISO (MGI:3714434|PMID:17521570) RGD PMID:17521570 MGI:3714434 NCBI chr 1:161,275,882...161,456,384
Ensembl chr 1:161,275,734...161,455,007
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd8 BTB domain containing 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6104538|PMID:29262337)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:29262337 GO_REF:0000002 GO_REF:0000024 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Itsn1 intersectin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G Itsn2 intersectin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,616,645...27,727,373
Ensembl chr 6:27,600,406...27,727,124
JBrowse link
fast, calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt1 synaptotagmin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3040539|PMID:12526776), (MGI:3653150|PMID:9194562), (MGI:69538|PMID:7954835)
ParkinsonsUK-UCL
RGD
PMID:7954835 PMID:9194562 PMID:12526776 GO_REF:0000024 MGI:3040539 MGI:3653150 MGI:69538 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
induction of synaptic vesicle exocytosis by positive regulation of presynaptic cytosolic calcium ion concentration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:7,380,892...7,546,104
Ensembl chr 3:7,380,922...7,546,091
JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr16:5,227,157...5,521,163
Ensembl chr16:5,228,306...5,668,215
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr17:77,564,630...77,910,000
Ensembl chr17:77,564,460...77,909,106
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:36,906,771...37,169,191
Ensembl chr 3:36,910,427...37,168,944
JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cnr1 cannabinoid receptor 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:48,408,543...48,436,099
Ensembl chr 5:48,408,574...48,435,099
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
negative regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pten phosphatase and tensin homolog involved_in ISO (MGI:3629385|PMID:16675393), (MGI:3772418|PMID:18082964) RGD PMID:16675393 PMID:18082964 MGI:3629385 MGI:3772418 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in IMP PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
negative regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:5490391|PMID:23616533) RGD PMID:23616533 MGI:5490391 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in IMP PMID:24709664 UniProt PMID:24709664 RGD:11059581 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:894315 (MGI:5490391|PMID:23616533)
RGD PMID:23616533 PMID:21873635 MGI:5490391, RGD:13792537 NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:97852 (MGI:5490391|PMID:23616533)
RGD PMID:23616533 PMID:21873635 MGI:5490391, RGD:13792537 NCBI chr 7:53,423,039...53,456,388
Ensembl chr 7:53,423,130...53,456,370
JBrowse link
G Syt4 synaptotagmin 4 involved_in ISO (MGI:4457852|PMID:19448629) RGD PMID:19448629 MGI:4457852 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
negative regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyfip1 cytoplasmic FMR1 interacting protein 1 IMP RGD PMID:26843638 RGD:11342679 NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:5603022|PMID:24587181) RGD PMID:24587181 MGI:5603022 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc17a6 solute carrier family 17 member 6 involved_in ISO
IEA
IDA
IBA
IMP
(PMID:11698620)
GO_REF:0000107
PMID:11502256
PMID:21873635
RGD
Ensembl
PMID:11698620 PMID:11502256 PMID:21873635 PMID:11502256 GO_REF:0000107, RGD:13702232, RGD:13792537, RGD:13702232 NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
JBrowse link
G Slc17a7 solute carrier family 17 member 7 involved_in IDA
ISO
IBA
PMID:10938000
(MGI:3616153|PMID:15118123)
PMID:21873635
RGD PMID:15118123 PMID:10938000 PMID:21873635 MGI:3616153, RGD:12050146, RGD:13792537 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Slc17a8 solute carrier family 17 member 8 involved_in IBA
ISO
PMID:21873635
(PMID:12097496)
RGD PMID:12097496 PMID:21873635 RGD:13792537 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
JBrowse link
G Slc18a2 solute carrier family 18 member A2 involved_in IEA
ISO
GO_REF:0000107
(MGI:1194523|PMID:9427251)
Ensembl
RGD
PMID:9427251 GO_REF:0000107 MGI:1194523 NCBI chr 1:258,413,748...258,449,143
Ensembl chr 1:258,413,959...258,448,325
JBrowse link
G Slc18a3 solute carrier family 18 member A3 involved_in IDA
ISO
IMP
PMID:9182805
(MGI:6189683|PMID:4075114)
RGD PMID:4075114 PMID:9182805 PMID:9182805 MGI:6189683, RGD:13702424, RGD:13702424 NCBI chr16:7,713,630...7,716,491 JBrowse link
G Slc32a1 solute carrier family 32 member 1 involved_in IDA
IBA
IMP
PMID:9349821
PMID:21873635
SynGO
GO_Central
PMID:9349821 PMID:21873635 PMID:9349821 RGD:730037, RGD:13792537, RGD:730037 NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844
JBrowse link
positive regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt1 synaptotagmin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2179533|PMID:11242035)
UniProt
RGD
PMID:11242035 GO_REF:0000024 MGI:2179533 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
positive regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4457945|PMID:20534458)
Ensembl
RGD
PMID:20534458 GO_REF:0000107 MGI:4457945 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167
JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 involved_in ISO (MGI:4457945|PMID:20534458) RGD PMID:20534458 MGI:4457945 NCBI chr 4:14,388,322...15,870,036
Ensembl chr 4:14,386,399...15,870,240
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO (MGI:5284797|PMID:15620359) RGD PMID:15620359 MGI:5284797 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5284797|PMID:15620359)
Ensembl
RGD
PMID:15620359 GO_REF:0000107 MGI:5284797 NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in ISO (MGI:5286761|PMID:21808020) RGD PMID:21808020 MGI:5286761 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:22851330 RGD:13506174 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:22851330 RGD:13506174 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937) RGD PMID:33478937 MGI:6694370 NCBI chr14:83,873,397...84,376,138
Ensembl chr14:83,873,940...84,375,075
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 IMP RGD PMID:19762466 RGD:13461856 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Dnm1 dynamin 1 IMP RGD PMID:17437541 RGD:8554440 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm1l dynamin 1-like involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 IMP RGD PMID:18445495 RGD:13462049 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mff mitochondrial fission factor involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 9:84,007,798...84,036,039
Ensembl chr 9:84,007,798...84,036,039
JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP
ISO
PMID:19628693
(MGI:4355770|PMID:19628693)
RGD PMID:19628693 PMID:19628693 MGI:4355770, RGD:8554760 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:21808019 RGD:13506237 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma IMP RGD PMID:26627835 RGD:11532172 NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 IMP RGD PMID:14532001 RGD:13464359 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:21808019 RGD:13506237 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(PMID:21102408)
UniProt
RGD
PMID:21102408 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
positive regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Dnm1l dynamin 1-like involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP
ISO
PMID:19628693
(MGI:4355770|PMID:19628693)
RGD PMID:19628693 PMID:19628693 MGI:4355770, RGD:8554760 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Slc4a8 solute carrier family 4 member 8 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5013899|PMID:21593314)
Ensembl
RGD
PMID:21593314 GO_REF:0000107 MGI:5013899 NCBI chr 7:131,861,284...131,937,963
Ensembl chr 7:131,864,102...131,931,051
JBrowse link
positive regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rims1 regulating synaptic membrane exocytosis 1 involved_in NAS PMID:9252191 UniProt PMID:9252191 RGD:633897 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
positive regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rims1 regulating synaptic membrane exocytosis 1 involved_in IGI PMID:21262469 ParkinsonsUK-UCL PMID:21262469 RGD:10047275 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Unc13b unc-13 homolog B involved_in IGI PMID:21262469 ParkinsonsUK-UCL PMID:21262469 PMID:21262469 RGD:10047275, RGD:10047275 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
positive regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 IMP RGD PMID:17880892 RGD:8553820 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm3 dynamin 3 IMP RGD PMID:23687302 RGD:13462065 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) IMP RGD PMID:31074746 RGD:41408338 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5883825|PMID:28413018)
UniProt
RGD
PMID:28413018 GO_REF:0000024 MGI:5883825 NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
JBrowse link
postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in ISO (MGI:5819335|PMID:24217640) RGD PMID:24217640 MGI:5819335 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IMP
ISO
EXP
IDA
PMID:17289840
(MGI:5819335|PMID:24217640)
RGD PMID:24217640 PMID:17289840 PMID:17289840 PMID:17289840 MGI:5819335, RGD:13432317, RGD:13432317, RGD:13432317 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Caly calcyon neuron-specific vesicular protein involved_in ISO (MGI:3836481|PMID:19120439) RGD PMID:19120439 MGI:3836481 NCBI chr 1:194,862,671...194,873,861
Ensembl chr 1:194,862,672...194,873,551
JBrowse link
G Dnm3 dynamin 3 involved_in IMP PMID:17880892 SynGO PMID:17880892 RGD:8553820 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IDA
IMP
PMID:25023288 SynGO PMID:25023288 PMID:25023288 RGD:13702241, RGD:13702241 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Myo6 myosin VI involved_in ISO (MGI:3527915|PMID:15657400) RGD PMID:15657400 MGI:3527915 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Synj1 synaptojanin 1 involved_in ISO (MGI:5819348|PMID:18987319) RGD PMID:18987319 MGI:5819348 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
presynaptic dense core vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadps calcium dependent secretion activator involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q8BYR5 (MGI:5634021|PMID:25719439)
Ensembl
RGD
PMID:25719439 GO_REF:0000107 MGI:5634021 NCBI chr15:12,289,803...12,742,786
Ensembl chr15:12,290,262...12,742,779
JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in ISO (MGI:3621672|PMID:11545717) RGD PMID:11545717 MGI:3621672 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Syt6 synaptotagmin 6 involved_in IMP
IDA
PMID:26216953 SynGO PMID:26216953 PMID:26216953 RGD:13702162, RGD:13702162 NCBI chr 2:191,093,009...191,152,283
Ensembl chr 2:191,093,007...191,149,956
JBrowse link
G Unc13a unc-13 homolog A involved_in IBA
ISO
PMID:21873635
UniProtKB:Q9Z1N9 (MGI:5819330|PMID:26575293)
RGD PMID:26575293 PMID:21873635 MGI:5819330, RGD:13792537 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B involved_in IBA
ISO
PMID:21873635
(MGI:5819330|PMID:26575293)
RGD PMID:26575293 PMID:21873635 MGI:5819330, RGD:13792537 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
regulation of calcium ion-dependent exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:4866942|PMID:21106823) RGD PMID:21106823 MGI:4866942 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3652690|PMID:16782817)
ParkinsonsUK-UCL
RGD
PMID:16782817 GO_REF:0000024 MGI:3652690 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
JBrowse link
regulation of neurotransmitter loading into synaptic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc10a4 solute carrier family 10, member 4 involved_in ISO
IEA
(MGI:5913479|PMID:25176177)
GO_REF:0000107
RGD
Ensembl
PMID:25176177 GO_REF:0000107 MGI:5913479 NCBI chr14:35,198,509...35,203,729
Ensembl chr14:35,197,886...35,203,729
JBrowse link
regulation of postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 involved_in IMP
IDA
PMID:19169250 SynGO PMID:19169250 PMID:19169250 RGD:2313185, RGD:2313185 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
JBrowse link
G Arc activity-regulated cytoskeleton-associated protein involved_in ISO (MGI:6189470|PMID:17088211) RGD PMID:17088211 MGI:6189470 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378
JBrowse link
G Atad1 ATPase family, AAA domain containing 1 involved_in ISO (MGI:5050342|PMID:21496646) RGD PMID:21496646 MGI:5050342 NCBI chr 1:230,544,227...230,610,524
Ensembl chr 1:230,544,047...230,596,548
JBrowse link
G Drd3 dopamine receptor D3 involved_in EXP
IDA
PMID:16510729 SynGO PMID:16510729 PMID:16510729 RGD:13702467, RGD:13702467 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
JBrowse link
G Drd4 dopamine receptor D4 involved_in IEA
ISO
GO_REF:0000107
(MGI:3826939|PMID:18832154)
Ensembl
RGD
PMID:18832154 GO_REF:0000107 MGI:3826939 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
JBrowse link
G Efnb2 ephrin B2 involved_in ISO (MGI:3814755|PMID:19160501) RGD PMID:19160501 MGI:3814755 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
JBrowse link
G Gsg1l GSG1-like involved_in ISO (MGI:6189390|PMID:26932439) RGD PMID:26932439 MGI:6189390 NCBI chr 1:180,440,403...180,654,430 JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IDA
IMP
PMID:15310851 SynGO PMID:15310851 PMID:15310851 RGD:13702182, RGD:13702182 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
JBrowse link
G Hpca hippocalcin involved_in IMP
IDA
PMID:20852624 SynGO PMID:20852624 PMID:20852624 RGD:13702412, RGD:13702412 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841
JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 involved_in ISO (MGI:4821212|PMID:20547133) RGD PMID:20547133 MGI:4821212 NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO (PMID:18549786) RGD PMID:18549786 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IDA
IMP
PMID:21148011 SynGO PMID:21148011 PMID:21148011 RGD:13702142, RGD:13702142 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:16221846) RGD PMID:16221846 NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IEA
ISO
GO_REF:0000107
(MGI:5705662|PMID:26621723)
Ensembl
RGD
PMID:26621723 GO_REF:0000107 MGI:5705662 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:24966368) RGD PMID:24966368 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in IDA
IMP
PMID:16617342
PMID:23918399
SynGO PMID:16617342 PMID:23918399 PMID:16617342 PMID:23918399 RGD:13702454, RGD:13702399, RGD:13702454, RGD:13702399 NCBI chr20:5,718,134...5,768,064
Ensembl chr20:5,719,857...5,765,313
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP
IDA
PMID:28855251 SynGO PMID:28855251 PMID:28855251 RGD:13702248, RGD:13702248 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:6189392|PMID:22243752) RGD PMID:22243752 MGI:6189392 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988
JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha involved_in ISO (MGI:2154682|PMID:11733061) RGD PMID:11733061 MGI:2154682 NCBI chr14:91,556,743...91,606,230
Ensembl chr14:91,604,121...91,606,907
JBrowse link
G Scrib scribble planar cell polarity protein involved_in IDA
IMP
PMID:25310985 SynGO PMID:25310985 PMID:25310985 RGD:12050130, RGD:12050130 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sirt2 sirtuin 2 involved_in IDA
IMP
EXP
PMID:28793258 SynGO PMID:28793258 PMID:28793258 PMID:28793258 RGD:13702139, RGD:13702139, RGD:13702139 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 IMP RGD PMID:24191017 RGD:13209020 NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322
JBrowse link
G Synj1 synaptojanin 1 involved_in ISO (MGI:5819348|PMID:18987319) RGD PMID:18987319 MGI:5819348 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
G Usp46 ubiquitin specific peptidase 46 involved_in IMP
IDA
PMID:26077708 SynGO PMID:26077708 PMID:26077708 RGD:11056935, RGD:11056935 NCBI chr14:34,150,055...34,219,227
Ensembl chr14:34,150,004...34,219,227
JBrowse link
regulation of presynaptic dense core granule exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx7 purinergic receptor P2X 7 involved_in EXP
IDA
PMID:24037803 SynGO PMID:24037803 PMID:24037803 RGD:13702177, RGD:13702177 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
JBrowse link
G Syt4 synaptotagmin 4 involved_in ISO (MGI:4457852|PMID:19448629) RGD PMID:19448629 MGI:4457852 NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
JBrowse link
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gripap1 GRIP1 associated protein 1 involved_in IMP
IDA
IBA
PMID:20098723
PMID:21873635
SynGO
GO_Central
PMID:20098723 PMID:20098723 PMID:21873635 RGD:12050105, RGD:12050105, RGD:13792537 NCBI chr  X:14,678,896...14,708,747
Ensembl chr  X:14,678,898...14,708,679
JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in IMP
IDA
PMID:28111082 SynGO PMID:28111082 PMID:28111082 RGD:13702195, RGD:13702195 NCBI chr10:54,666,015...54,671,581
Ensembl chr10:54,666,015...54,671,565
JBrowse link
regulation of synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcdh17 protocadherin 17 acts_upstream_of_or_within ISO (MGI:5514320|PMID:23684785) RGD PMID:23684785 MGI:5514320 NCBI chr15:60,222,088...60,316,172
Ensembl chr15:60,222,004...60,313,999
JBrowse link
regulation of synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsn bassoon (presynaptic cytomatrix protein) involved_in IEA
ISO
GO_REF:0000107
(MGI:4879069|PMID:21092860)
Ensembl
RGD
PMID:21092860 GO_REF:0000107 MGI:4879069 NCBI chr 8:108,784,849...108,875,819
Ensembl chr 8:108,788,542...108,875,819
JBrowse link
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 involved_in IDA
IMP
PMID:24254883 SynGO PMID:24254883 PMID:24254883 RGD:13702178, RGD:13702178 NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
JBrowse link
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 involved_in ISO (MGI:5440402|PMID:22500637) RGD PMID:22500637 MGI:5440402 NCBI chr 3:168,621,905...168,656,570
Ensembl chr 3:168,621,969...168,655,935
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (MGI:4366191|PMID:19822762) RGD PMID:19822762 MGI:4366191 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Pld1 phospholipase D1 involved_in ISO
IEA
(PMID:11752468)
GO_REF:0000107
RGD
Ensembl
PMID:11752468 GO_REF:0000107 NCBI chr 2:110,849,205...111,047,692
Ensembl chr 2:110,893,608...111,047,692
JBrowse link
G Pls3 plastin 3 involved_in ISO (MGI:5469774|PMID:23263861) RGD PMID:23263861 MGI:5469774 NCBI chr  X:111,589,193...111,683,908
Ensembl chr  X:111,589,254...111,683,891
JBrowse link
G Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta involved_in ISO (MGI:77916|PMID:8548807) RGD PMID:8548807 MGI:77916 NCBI chr12:15,492,233...15,624,942
Ensembl chr12:15,511,801...15,624,942
JBrowse link
G Rab3b RAB3B, member RAS oncogene family involved_in ISO (PMID:20007772) RGD PMID:20007772 NCBI chr 5:123,629,562...123,697,410
Ensembl chr 5:123,644,423...123,697,401
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:5641291|PMID:25904804)
Ensembl
RGD
PMID:25904804 GO_REF:0000107 MGI:5641291 NCBI chr 3:56,809,388...57,101,332
Ensembl chr 3:56,809,270...57,102,316
JBrowse link
G Snap29 synaptosome associated protein 29 involved_in IDA
IMP
PMID:15890653 SynGO PMID:15890653 PMID:15890653 RGD:13702146, RGD:13702146 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
G Syn1 synapsin I involved_in ISO (MGI:82574|PMID:8794863) RGD PMID:8794863 MGI:82574 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:1,172,208...1,227,396
JBrowse link
regulation of synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in ISO (MGI:3763684|PMID:17660813) RGD PMID:17660813 MGI:3763684 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Septin5 septin 5 involved_in ISO (MGI:4880833|PMID:20624595) RGD PMID:20624595 MGI:4880833 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO MGI:4127237 (MGI:5438074|PMID:22536397) RGD PMID:22536397 MGI:5438074 NCBI chr20:8,286,337...8,645,567
Ensembl chr20:8,288,711...8,643,960
JBrowse link
G Calm1 calmodulin 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO (MGI:5807028|PMID:26748701) RGD PMID:26748701 MGI:5807028 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131
JBrowse link
G Dnm1 dynamin 1 IMP RGD PMID:16648848 RGD:13504740 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:6189511|PMID:25501810) RGD PMID:25501810 MGI:6189511 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:18842885 RGD:8554167 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) RGD PMID:15386003 MGI:3054280 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in IEA
ISO
GO_REF:0000107
(MGI:4830393|PMID:20810903)
Ensembl
RGD
PMID:20810903 GO_REF:0000107 MGI:4830393 NCBI chr15:3,759,950...3,804,976
Ensembl chr15:3,760,030...3,804,981
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma involved_in IMP
IDA
PMID:26627835 SynGO PMID:26627835 PMID:26627835 RGD:11532172, RGD:11532172 NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O60890 (PMID:27160703)
Ensembl
RGD
PMID:27160703 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in IDA
IMP
PMID:25057210 SynGO PMID:25057210 PMID:25057210 RGD:13702419, RGD:13702419 NCBI chr 8:57,845,831...57,884,516
Ensembl chr 8:57,846,659...57,872,027
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 IMP RGD PMID:22750032 RGD:13463484 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Slc17a7 solute carrier family 17 member 7 IMP RGD PMID:16815333 RGD:13504741 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:18842885 RGD:8554167 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) RGD PMID:14532108 MGI:6189675 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in IDA
EXP
IMP
PMID:26607000 SynGO PMID:26607000 PMID:26607000 PMID:26607000 RGD:11058152, RGD:11058152, RGD:11058152 NCBI chr13:74,919,872...74,942,791
Ensembl chr13:74,919,880...74,933,686
JBrowse link
regulation of synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 involved_in ISO (MGI:1202483|PMID:9547227) RGD PMID:9547227 MGI:1202483 NCBI chr14:81,911,240...82,020,594
Ensembl chr14:81,911,099...82,028,969
JBrowse link
G Adora2a adenosine A2a receptor involved_in EXP
IDA
PMID:15659214 SynGO PMID:15659214 PMID:15659214 RGD:1625642, RGD:1625642 NCBI chr20:13,315,848...13,333,386
Ensembl chr20:13,315,853...13,333,386
JBrowse link
G Adora2b adenosine A2B receptor involved_in IEA
ISO
GO_REF:0000107
(MGI:6108216|PMID:25704806)
Ensembl
RGD
PMID:25704806 GO_REF:0000107 MGI:6108216 NCBI chr10:46,940,394...46,956,772
Ensembl chr10:46,940,384...46,956,772
JBrowse link
G Adora3 adenosine A3 receptor involved_in EXP PMID:8987783 SynGO PMID:8987783 RGD:13702310
G Adra1a adrenoceptor alpha 1A involved_in EXP
IDA
PMID:12548707 SynGO PMID:12548707 PMID:12548707 RGD:13702265, RGD:13702265 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in ISO (MGI:3761775|PMID:11927164) RGD PMID:11927164 MGI:3761775 NCBI chr 1:253,061,480...253,064,280
Ensembl chr 1:253,060,218...253,064,365
JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in IDA
EXP
PMID:17175110 SynGO PMID:17175110 PMID:17175110 RGD:5129150, RGD:5129150 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Apba1 amyloid beta precursor protein binding family A member 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:2450068|PMID:12547917), (MGI:3691953|PMID:17167098)
Ensembl
RGD
PMID:12547917 PMID:17167098 GO_REF:0000107 MGI:2450068 MGI:3691953 NCBI chr 1:221,363,769...221,569,496
Ensembl chr 1:221,363,778...221,566,553
JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 involved_in ISO (MGI:3691953|PMID:17167098) RGD PMID:17167098 MGI:3691953 NCBI chr 1:118,053,270...118,286,858
Ensembl chr 1:118,103,219...118,285,699
JBrowse link
G Bace1 beta-secretase 1 involved_in ISO (MGI:3806404|PMID:18753368) RGD PMID:18753368 MGI:3806404 NCBI chr 8:46,142,060...46,166,268
Ensembl chr 8:46,142,116...46,165,876
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in ISO (MGI:1340444|PMID:10322048) RGD PMID:10322048 MGI:1340444 NCBI chr 3:36,906,771...37,169,191
Ensembl chr 3:36,910,427...37,168,944
JBrowse link
G Calm1 calmodulin 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase involved_in ISO (MGI:3698294|PMID:17287346) RGD PMID:17287346 MGI:3698294 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694
JBrowse link
G Chrm2 cholinergic receptor, muscarinic 2 involved_in ISO (MGI:2176006|PMID:11880500) RGD PMID:11880500 MGI:2176006 NCBI chr 4:65,015,408...65,149,104
Ensembl chr 4:65,014,144...65,149,103
JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit involved_in IDA
EXP
PMID:12065717 SynGO PMID:12065717 PMID:12065717 RGD:13702272, RGD:13702272 NCBI chr 8:55,401,981...55,415,012
Ensembl chr 8:55,401,702...55,415,165
JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit involved_in ISO (MGI:2673776|PMID:12944511) RGD PMID:12944511 MGI:2673776 NCBI chr 3:168,136,246...168,157,839
Ensembl chr 3:168,136,266...168,156,957
JBrowse link
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit involved_in IEA
ISO
GO_REF:0000107
(MGI:6191866|PMID:19693710)
Ensembl
RGD
PMID:19693710 GO_REF:0000107 MGI:6191866 NCBI chr 8:55,369,794...55,398,526
Ensembl chr 8:55,369,794...55,398,146
JBrowse link
G Chrna6 cholinergic receptor nicotinic alpha 6 subunit involved_in IEA
ISO
GO_REF:0000107
(MGI:2673776|PMID:12944511)
Ensembl
RGD
PMID:12944511 GO_REF:0000107 MGI:2673776 NCBI chr16:64,697,741...64,704,441
Ensembl chr16:64,697,741...64,704,441
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in EXP
IDA
PMID:21762741 SynGO PMID:21762741 PMID:21762741 RGD:13702307, RGD:13702307 NCBI chr 1:116,715,286...116,837,223
Ensembl chr 1:116,714,711...116,837,240
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit involved_in ISO (MGI:2673776|PMID:12944511), (MGI:6189689|PMID:11145999) RGD PMID:11145999 PMID:12944511 MGI:2673776 MGI:6189689 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Chrnb3 cholinergic receptor nicotinic beta 3 subunit involved_in ISO (MGI:3028759|PMID:14657161) RGD PMID:14657161 MGI:3028759 NCBI chr16:64,713,438...64,751,360
Ensembl chr16:64,714,169...64,751,360
JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:3583729|PMID:15848802)
Ensembl
RGD
PMID:15848802 GO_REF:0000107 MGI:3583729 NCBI chr 8:110,220,653...110,234,750
Ensembl chr 8:110,220,653...110,234,758
JBrowse link
G Cyth1 cytohesin 1 involved_in IMP
IDA
PMID:9927699 SynGO PMID:9927699 PMID:9927699 RGD:13702340, RGD:13702340 NCBI chr10:103,402,727...103,485,826
Ensembl chr10:103,366,145...103,485,760
JBrowse link
G Dgki diacylglycerol kinase, iota involved_in ISO (MGI:4936793|PMID:21119615) RGD PMID:21119615 MGI:4936793 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733
JBrowse link
G Drd1 dopamine receptor D1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5506871|PMID:22586226)
Ensembl
RGD
PMID:22586226 GO_REF:0000107 MGI:5506871 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 involved_in ISO (MGI:2387277|PMID:12223553), (MGI:5506871|PMID:22586226) RGD PMID:12223553 PMID:22586226 MGI:2387277 MGI:5506871 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Drd4 dopamine receptor D4 involved_in EXP
IDA
PMID:24155292 SynGO PMID:24155292 PMID:24155292 RGD:13702381, RGD:13702381 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in IBA
ISO
PMID:21873635
(MGI:3797662|PMID:18504299)
RGD PMID:18504299 PMID:21873635 MGI:3797662, RGD:13792537 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (MGI:5699934|PMID:26400647) RGD PMID:26400647 MGI:5699934 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Fbxl20 F-box and leucine-rich repeat protein 20 involved_in IEA
ISO
GO_REF:0000107
(MGI:3765255|PMID:17803915)
Ensembl
RGD
PMID:17803915 GO_REF:0000107 MGI:3765255 NCBI chr10:83,080,568...83,143,680
Ensembl chr10:83,086,551...83,144,162
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in ISO (MGI:3654775|PMID:16819522) RGD PMID:16819522 MGI:3654775 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997
JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5708768|PMID:26637799)
Ensembl
RGD
PMID:26637799 GO_REF:0000107 MGI:5708768 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373
JBrowse link
G Git2 GIT ArfGAP 2 involved_in ISO (MGI:5708768|PMID:26637799) RGD PMID:26637799 MGI:5708768 NCBI chr12:41,829,717...41,872,621
Ensembl chr12:41,829,730...41,871,097
JBrowse link
G Glra3 glycine receptor, alpha 3 involved_in ISO (MGI:5770489|PMID:26851771) RGD PMID:26851771 MGI:5770489 NCBI chr16:34,205,431...34,848,332
Ensembl chr16:34,204,811...34,848,753
JBrowse link
G Grin3a glutamate ionotropic receptor NMDA type subunit 3A involved_in ISO (MGI:6109389|PMID:25144876) RGD PMID:25144876 MGI:6109389 NCBI chr 5:64,006,847...64,206,408
Ensembl chr 5:64,009,980...64,206,085
JBrowse link
G Grm4 glutamate metabotropic receptor 4 involved_in ISO (MGI:83238|PMID:8815915) RGD PMID:8815915 MGI:83238 NCBI chr20:5,484,172...5,572,821
Ensembl chr20:5,481,124...5,572,821
JBrowse link
G Grm7 glutamate metabotropic receptor 7 involved_in ISO (MGI:3690146|PMID:12065412) RGD PMID:12065412 MGI:3690146 NCBI chr 4:143,730,862...144,613,230
Ensembl chr 4:143,731,259...144,612,344
JBrowse link
G Grm8 glutamate metabotropic receptor 8 involved_in EXP
IDA
PMID:15275822 SynGO PMID:15275822 PMID:15275822 RGD:6484726, RGD:6484726 NCBI chr 4:55,805,762...56,731,690
Ensembl chr 4:55,805,955...56,730,831
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:17989287)
GO_REF:0000107
RGD
Ensembl
PMID:17989287 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A involved_in EXP
IDA
PMID:10381597 SynGO PMID:10381597 PMID:10381597 RGD:13702211, RGD:13702211 NCBI chr 2:36,694,174...36,695,442
Ensembl chr 2:36,694,174...36,695,442
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B involved_in IDA
EXP
PMID:17067296 SynGO PMID:17067296 PMID:17067296 RGD:13702319, RGD:13702319 NCBI chr 8:82,513,572...82,534,892
Ensembl chr 8:82,517,360...82,534,549
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A involved_in IDA
EXP
PMID:12196574 SynGO PMID:12196574 PMID:12196574 RGD:13702246, RGD:13702246 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in EXP
IDA
PMID:26779891 SynGO PMID:26779891 PMID:26779891 RGD:13702205, RGD:13702205 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 involved_in ISO (MGI:5917278|PMID:25556795) RGD PMID:25556795 MGI:5917278 NCBI chr13:103,722,140...104,024,762
Ensembl chr13:103,722,245...104,024,740
JBrowse link
G LOC100911796 adenosine receptor A3-like involved_in EXP PMID:8987783 SynGO PMID:8987783 RGD:13702310 NCBI chr 2:193,352,759...193,392,946 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:23949442) RGD PMID:23949442 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Myo6 myosin VI involved_in ISO (MGI:3654775|PMID:16819522) RGD PMID:16819522 MGI:3654775 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Ncs1 neuronal calcium sensor 1 involved_in IDA
IMP
PMID:12947410 SynGO PMID:12947410 PMID:12947410 RGD:13702435, RGD:13702435 NCBI chr 3:14,523,220...14,568,829
Ensembl chr 3:14,523,220...14,568,829
JBrowse link
G Nr3c2 nuclear receptor subfamily 3, group C, member 2 involved_in ISO (MGI:3798112|PMID:18547242) RGD PMID:18547242 MGI:3798112 NCBI chr19:30,715,648...31,059,885
Ensembl chr19:30,715,648...31,059,885
JBrowse link
G Nrn1 neuritin 1 involved_in ISO (MGI:5908484|PMID:28475719) RGD PMID:28475719 MGI:5908484 NCBI chr17:28,129,969...28,138,898
Ensembl chr17:28,129,977...28,138,896
JBrowse link
G Nrxn3 neurexin 3 involved_in ISO (MGI:5662329|PMID:26030848) RGD PMID:26030848 MGI:5662329 NCBI chr 6:107,641,760...109,272,849
Ensembl chr 6:107,641,780...109,272,044
JBrowse link
G P2rx1 purinergic receptor P2X 1 involved_in IDA
EXP
PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr10:57,618,586...57,633,648
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in IDA
EXP
PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr12:46,338,979...46,342,891
Ensembl chr12:46,339,549...46,342,891
JBrowse link
G P2ry1 purinergic receptor P2Y1 involved_in IDA
EXP
PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr 2:145,241,975...145,248,186
Ensembl chr 2:145,241,849...145,248,457
JBrowse link
G P2ry2 purinergic receptor P2Y2 involved_in EXP
IDA
PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr 1:155,352,050...155,367,423
Ensembl chr 1:155,351,165...155,367,632
JBrowse link
G P2ry4 pyrimidinergic receptor P2Y4 involved_in EXP
IDA
PMID:16000618 SynGO PMID:16000618 PMID:16000618 RGD:1581702, RGD:1581702 NCBI chr  X:65,681,680...65,717,404
Ensembl chr  X:65,683,232...65,721,748
JBrowse link
G Pfn2 profilin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3715145 (MGI:3714870|PMID:17541406)
Ensembl
RGD
PMID:17541406 GO_REF:0000107 MGI:3714870 NCBI chr 2:142,067,102...142,072,938
Ensembl chr 2:142,067,104...142,072,938
JBrowse link
G Ppfia2 PTPRF interacting protein alpha 2 involved_in IMP
IDA
PMID:23751498 SynGO PMID:23751498 PMID:23751498 RGD:13702233, RGD:13702233 NCBI chr 7:41,765,716...42,240,104
Ensembl chr 7:41,765,575...42,239,599
JBrowse link
G Prepl prolyl endopeptidase-like involved_in ISO
IEA
ISS
(PMID:24610330)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:24610330 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:9,580,367...9,609,957
Ensembl chr 6:9,580,217...9,607,772
JBrowse link
G Prkca protein kinase C, alpha involved_in ISO (MGI:5141567|PMID:21658591) RGD PMID:21658591 MGI:5141567 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Prkcb protein kinase C, beta involved_in IEA
ISO
GO_REF:0000107
(MGI:5141567|PMID:21658591)
Ensembl
RGD
PMID:21658591 GO_REF:0000107 MGI:5141567 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Prkce protein kinase C, epsilon involved_in EXP PMID:26625935 SynGO PMID:26625935 RGD:11353024 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISO (MGI:5637456|PMID:24794094) RGD PMID:24794094 MGI:5637456 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IDA PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO
ISS
(PMID:16141272)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:16141272 GO_REF:0000024 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 involved_in ISS GO_REF:0000024 ParkinsonsUK-UCL GO_REF:0000024 NCBI chr14:68,332,360...68,334,470 JBrowse link
G Rims3 regulating synaptic membrane exocytosis 3 acts_upstream_of_or_within IMP PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chr 5:134,429,092...134,468,935
Ensembl chr 5:134,435,829...134,640,489
JBrowse link
G Rims4 regulating synaptic membrane exocytosis 4 acts_upstream_of_or_within IMP PMID:20452978 MGI PMID:20452978 RGD:8554325 NCBI chr 3:152,520,982...152,585,068
Ensembl chr 3:152,524,095...152,584,780
JBrowse link
G Snapin SNAP-associated protein involved_in IBA
ISO
PMID:21873635
(MGI:4430710|PMID:19217378)
RGD PMID:19217378 PMID:21873635 MGI:4430710, RGD:13792537 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Stxbp5 syntaxin binding protein 5 involved_in ISO (MGI:3814264|PMID:18936251) RGD PMID:18936251 MGI:3814264 NCBI chr 1:4,182,489...4,335,271
Ensembl chr 1:4,185,529...4,335,101
JBrowse link
G Stxbp5l syntaxin binding protein 5L involved_in ISO (MGI:6189626|PMID:24744148) RGD PMID:24744148 MGI:6189626 NCBI chr11:63,334,667...63,654,270
Ensembl chr11:63,334,667...63,657,014
JBrowse link
G Syp synaptophysin involved_in IEA
ISO
GO_REF:0000107
(MGI:1349221|PMID:10595519)
Ensembl
RGD
PMID:10595519 GO_REF:0000107 MGI:1349221 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Syt1 synaptotagmin 1 involved_in IDA PMID:28057568 UniProt PMID:28057568 RGD:14390053 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:17027648) RGD PMID:17027648 NCBI chr 3:106,279,444...106,290,298
Ensembl chr 3:106,279,425...106,291,964
JBrowse link
G Wnt7a Wnt family member 7A involved_in ISO (MGI:5699934|PMID:26400647) RGD PMID:26400647 MGI:5699934 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
JBrowse link
regulation of synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cplx1 complexin 1 involved_in ISO (MGI:2679622|PMID:11163241) RGD PMID:11163241 MGI:2679622 NCBI chr14:1,184,638...1,216,392 JBrowse link
G Cplx2 complexin 2 involved_in ISO (MGI:2679622|PMID:11163241) RGD PMID:11163241 MGI:2679622 NCBI chr17:10,219,577...10,292,835
Ensembl chr17:10,222,347...10,293,855
JBrowse link
G Cplx3 complexin 3 involved_in ISO (MGI:5818105|PMID:27239031) RGD PMID:27239031 MGI:5818105 NCBI chr 8:58,003,535...58,010,297
Ensembl chr 8:58,003,535...58,010,297
JBrowse link
G Grik5 glutamate ionotropic receptor kainate type subunit 5 acts_upstream_of_or_within ISO MGI:2668206 (MGI:2449894|PMID:12533602) RGD PMID:12533602 MGI:2449894 NCBI chr 1:80,605,878...80,667,896
Ensembl chr 1:80,605,892...80,667,125
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
(MGI:3653150|PMID:9194562)
MGI:3762127 (MGI:3762126|PMID:11359932)
PMID:21873635
ParkinsonsUK-UCL
RGD
PMID:9194562 PMID:11359932 PMID:21873635 GO_REF:0000024 MGI:3653150 MGI:3762126, RGD:13792537 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
regulation of synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Napa NSF attachment protein alpha involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:104562 (MGI:4879076|PMID:21040848)
RGD PMID:21040848 PMID:21873635 MGI:4879076, RGD:13792537 NCBI chr 1:76,787,036...76,805,869
Ensembl chr 1:76,786,932...76,805,869
JBrowse link
G Napb NSF attachment protein beta involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:104563 (MGI:4879076|PMID:21040848)
PMID:21873635
Ensembl
RGD
PMID:21040848 PMID:21873635 GO_REF:0000107 MGI:4879076, RGD:13792537 NCBI chr 3:136,132,248...136,179,225
Ensembl chr 3:136,133,428...136,179,345
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IDA PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Stx1a syntaxin 1A involved_in ISO UniProtKB:O35526|UniProtKB:P61264 (MGI:5521403|PMID:24133272) RGD PMID:24133272 MGI:5521403 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Stx1b syntaxin 1B involved_in ISS
ISO
GO_REF:0000024
UniProtKB:O35526 (MGI:5521403|PMID:24133272)
ParkinsonsUK-UCL
RGD
PMID:24133272 GO_REF:0000024 MGI:5521403 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in IMP
IDA
PMID:21689256 RGD
UniProt
PMID:19255244 PMID:21689256 RGD:2311128, RGD:14390056 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Stxbp5 syntaxin binding protein 5 involved_in ISO (MGI:3814264|PMID:18936251) RGD PMID:18936251 MGI:3814264 NCBI chr 1:4,182,489...4,335,271
Ensembl chr 1:4,185,529...4,335,101
JBrowse link
G Unc13a unc-13 homolog A involved_in IDA PMID:21689256 UniProt PMID:21689256 RGD:14390056 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
regulation of synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf14 fibroblast growth factor 14 acts_upstream_of_or_within IMP PMID:23831029 MGI PMID:23831029 RGD:10047342 NCBI chr15:101,045,038...101,679,888
Ensembl chr15:101,045,036...101,679,900
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 IMP RGD PMID:21808019 RGD:13506237 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
spontaneous exocytosis of neurotransmitter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IMP PMID:17190793 UniProt PMID:17190793 RGD:10047304 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
JBrowse link
G Syt12 synaptotagmin 12 involved_in IDA PMID:17190793 GO_Central PMID:17190793 RGD:10047304 NCBI chr 1:201,729,307...201,760,192
Ensembl chr 1:201,730,371...201,759,609
JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:5617942 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in ISO (MGI:6189637|PMID:11588176) RGD PMID:11588176 MGI:6189637 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IDA
ISO
IMP
IBA
PMID:22539861
(MGI:6189637|PMID:11588176)
PMID:21873635
RGD PMID:11588176 PMID:22539861 PMID:22539861 PMID:21873635 MGI:6189637, RGD:12050120, RGD:12050120, RGD:13792537 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in ISO UniProtKB:Q8BZ98 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm3 dynamin 3 involved_in ISO UniProtKB:P39053 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IC PMID:21832070 SynGO PMID:21832070 RGD:9685531 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IBA
ISO
PMID:21873635
(MGI:5707086|PMID:26412491)
RGD PMID:26412491 PMID:21873635 MGI:5707086, RGD:13792537 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
synaptic vesicle clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:2680876|PMID:14622577)
Ensembl
RGD
PMID:14622577 GO_REF:0000107 MGI:2680876 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Nlgn1 neuroligin 1 involved_in IDA
ISO
IMP
ISS
PMID:20534458
(MGI:2665153|PMID:12796785), (MGI:3694190|PMID:10892652)
PMID:19628693
GO_REF:0000024
RGD
BHF-UCL
PMID:10892652 PMID:12796785 PMID:20534458 PMID:19628693 GO_REF:0000024 MGI:2665153 MGI:3694190, RGD:10047242, RGD:8554760 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nrxn1 neurexin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:2665153|PMID:12796785)
BHF-UCL
RGD
PMID:12796785 GO_REF:0000024 MGI:2665153 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in ISO (MGI:4442284|PMID:20332206) RGD PMID:20332206 MGI:4442284 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in ISO (MGI:4830800|PMID:20338242) RGD PMID:20338242 MGI:4830800 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Syn1 synapsin I involved_in ISO (MGI:76610|PMID:7568108) RGD PMID:7568108 MGI:76610 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:1,172,208...1,227,396
JBrowse link
G Syn2 synapsin II involved_in IEA
ISO
GO_REF:0000107
(MGI:3831450|PMID:18945891), (MGI:4830800|PMID:20338242)
Ensembl
RGD
PMID:18945891 PMID:20338242 GO_REF:0000107 MGI:3831450 MGI:4830800 NCBI chr 4:148,178,846...148,347,010
Ensembl chr 4:148,186,270...148,344,192
JBrowse link
G Syn3 synapsin III involved_in IEA
ISO
GO_REF:0000107
(MGI:2180939|PMID:12040043)
Ensembl
RGD
PMID:12040043 GO_REF:0000107 MGI:2180939 NCBI chr 7:16,216,055...17,808,790
Ensembl chr 7:17,376,372...17,808,790
JBrowse link
G Syndig1 synapse differentiation inducing 1 involved_in IDA
IBA
PMID:20152115
PMID:21873635
UniProt
GO_Central
PMID:20152115 PMID:21873635 RGD:8554654, RGD:13792537 NCBI chr 3:138,030,995...138,234,646
Ensembl chr 3:138,031,769...138,198,122
JBrowse link
synaptic vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cltb clathrin, light chain B involved_in NAS PMID:3563513 UniProt PMID:3563513 RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
synaptic vesicle cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (MGI:5707546|PMID:26444684) RGD PMID:26444684 MGI:5707546 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
JBrowse link
G Stxbp5 syntaxin binding protein 5 involved_in IDA
IMP
PMID:27807164 SynGO PMID:27807164 PMID:27807164 RGD:13702312, RGD:13702312 NCBI chr 1:4,182,489...4,335,271
Ensembl chr 1:4,185,529...4,335,101
JBrowse link
G Syn1 synapsin I involved_in ISO (MGI:63816|PMID:7902212) RGD PMID:7902212 MGI:63816 NCBI chr  X:1,172,208...1,227,400
Ensembl chr  X:1,172,208...1,227,396
JBrowse link
G Syn2 synapsin II involved_in ISO (MGI:74599|PMID:7777057) RGD PMID:7777057 MGI:74599 NCBI chr 4:148,178,846...148,347,010
Ensembl chr 4:148,186,270...148,344,192
JBrowse link
G Syn3 synapsin III involved_in ISO (MGI:2180939|PMID:12040043) RGD PMID:12040043 MGI:2180939 NCBI chr 7:16,216,055...17,808,790
Ensembl chr 7:17,376,372...17,808,790
JBrowse link
synaptic vesicle docking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctbp2 C-terminal binding protein 2 involved_in ISO (MGI:5784793|PMID:26929012) RGD PMID:26929012 MGI:5784793 NCBI chr 1:187,782,064...187,918,115
Ensembl chr 1:187,782,682...187,920,222
JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:6120581|PMID:29439199)
Ensembl
RGD
PMID:29439199 GO_REF:0000107 MGI:6120581 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in ISO (MGI:4939085|PMID:21241895) RGD PMID:21241895 MGI:4939085 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in ISO (MGI:4939085|PMID:21241895) RGD PMID:21241895 MGI:4939085 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in TAS PMID:9704016 UniProt PMID:9704016 RGD:70020 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
G Stx1a syntaxin 1A involved_in IEP PMID:1321498 UniProt PMID:1321498 RGD:8553325 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Stx1b syntaxin 1B involved_in ISS
ISO
GO_REF:0000024
UniProtKB:O35526 (MGI:5521403|PMID:24133272), (MGI:5603022|PMID:24587181)
ParkinsonsUK-UCL
RGD
PMID:24133272 PMID:24587181 GO_REF:0000024 MGI:5521403 MGI:5603022 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stx3 syntaxin 3 TAS RGD PMID:7690687 RGD:68313 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
JBrowse link
G Stx4 syntaxin 4 IDA RGD PMID:7690687 RGD:68313 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Syde1 synapse defective Rho GTPase homolog 1 acts_upstream_of_or_within ISO MGI:4841821 (MGI:5515279|PMID:23791195) RGD PMID:23791195 MGI:5515279 NCBI chr 7:11,032,931...11,038,917
Ensembl chr 7:11,032,898...11,039,869
JBrowse link
G Unc13a unc-13 homolog A involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1342278 (MGI:4354715|PMID:19558619)
RGD PMID:19558619 PMID:21873635 MGI:4354715, RGD:13792537 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3051532 (MGI:4354715|PMID:19558619)
RGD PMID:19558619 PMID:21873635 MGI:4354715, RGD:13792537 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in ISO (MGI:5617001|PMID:25374362) RGD PMID:25374362 MGI:5617001 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in IEA
ISO
GO_REF:0000107
(MGI:6189485|PMID:27840001)
Ensembl
RGD
PMID:27840001 GO_REF:0000107 MGI:6189485 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Actg1 actin, gamma 1 involved_in ISO (MGI:6189485|PMID:27840001) RGD PMID:27840001 MGI:6189485 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Amph amphiphysin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2388118 (MGI:2176305|PMID:11879655)
RGD PMID:11879655 PMID:21873635 MGI:2176305, RGD:13792537 NCBI chr17:45,739,385...45,982,905 JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in ISO (PMID:11102472) RGD PMID:11102472 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IMP
IDA
PMID:19321783 SynGO PMID:19321783 PMID:19321783 RGD:12050109, RGD:12050109 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in IDA
IMP
PMID:26731518 SynGO PMID:26731518 PMID:26731518 RGD:11556875, RGD:11556875 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Bin1 bridging integrator 1 involved_in IMP
IDA
PMID:9348539 SynGO PMID:9348539 PMID:9348539 RGD:631926, RGD:631926 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Canx calnexin involved_in ISS
ISO
GO_REF:0000024
(MGI:5288282|PMID:21747946)
UniProt
RGD
PMID:21747946 GO_REF:0000024 MGI:5288282 NCBI chr10:34,623,865...34,656,866
Ensembl chr10:34,625,191...34,656,821
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (MGI:3625625|PMID:16606832) RGD PMID:16606832 MGI:3625625 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Cdk5 cyclin-dependent kinase 5 IMP RGD PMID:12855954 RGD:1358501 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cel carboxyl ester lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035
JBrowse link
G Cltc clathrin heavy chain involved_in IMP
IDA
PMID:16982422 SynGO PMID:16982422 PMID:16982422 RGD:13702168, RGD:13702168 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Dennd1a DENN domain containing 1A acts_upstream_of_or_within ISO (MGI:3694831|PMID:17182770) RGD PMID:17182770 MGI:3694831 NCBI chr 3:21,564,749...22,052,057
Ensembl chr 3:21,564,749...22,052,062
JBrowse link
G Dnm1 dynamin 1 involved_in ISO
IBA
(MGI:3709249|PMID:17463283)
PMID:21873635
RGD PMID:17463283 PMID:21873635 MGI:3709249, RGD:13792537 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm1l dynamin 1-like involved_in IDA
IMP
PMID:23792689 SynGO PMID:23792689 PMID:23792689 RGD:12793033, RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Dnm2 dynamin 2 involved_in ISO
IBA
(MGI:5285027|PMID:21689597)
PMID:21873635
RGD PMID:21689597 PMID:21873635 MGI:5285027, RGD:13792537 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Dnm3 dynamin 3 involved_in ISO
IBA
(MGI:5285027|PMID:21689597)
PMID:21873635
RGD PMID:21689597 PMID:21873635 MGI:5285027, RGD:13792537 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 involved_in IGI
ISO
IBA
PMID:20448150
UniProtKB:D3ZIM5|UniProtKB:D3ZYR1 (MGI:5320276|PMID:20448150)
PMID:21873635
RGD PMID:20448150 PMID:20448150 PMID:21873635 MGI:5320276, RGD:12050101, RGD:13792537 NCBI chr 2:30,079,143...30,181,639
Ensembl chr 2:30,080,962...30,181,241
JBrowse link
G Grn granulin precursor IMP RGD PMID:21813674 RGD:5509044 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Itsn1 intersectin 1 involved_in ISO (MGI:3811659|PMID:18676989) RGD PMID:18676989 MGI:3811659 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G LOC100910792 amphiphysin-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Nlgn1 neuroligin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Ophn1 oligophrenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:700009 (MGI:4359148|PMID:19481455)
RGD PMID:19481455 PMID:21873635 MGI:4359148, RGD:13792537 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5304995|PMID:21926968)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21926968 GO_REF:0000024 GO_REF:0000107 MGI:5304995 NCBI chr20:5,718,134...5,768,064
Ensembl chr20:5,719,857...5,765,313
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IMP
IDA
PMID:21808019 SynGO PMID:21808019 PMID:21808019 RGD:13506237, RGD:13506237 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IMP
IDA
PMID:20926670 SynGO PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180
JBrowse link
G RGD1307100 similar to RIKEN cDNA D630029K19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:119,708,114...119,924,697
Ensembl chr 2:119,708,209...119,924,695
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) RGD PMID:19458197 MGI:4365512 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in
acts_upstream_of_or_within
IMP
ISO
IDA
PMID:22099461
MGI:2151070 (MGI:4359148|PMID:19481455)
RGD PMID:19481455 PMID:22099461 PMID:22099461 MGI:4359148, RGD:13702445, RGD:13702445 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IDA
IMP
PMID:21808019 SynGO PMID:21808019 PMID:21808019 RGD:13506237, RGD:13506237 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Snca synuclein alpha involved_in IBA
ISO
PMID:21873635
(MGI:3850310|PMID:18980610), (MGI:5605098|PMID:25009269)
RGD PMID:18980610 PMID:25009269 PMID:21873635 MGI:3850310 MGI:5605098, RGD:13792537 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Sncb synuclein, beta involved_in IBA
ISO
IEA
PMID:21873635
(MGI:5605098|PMID:25009269)
GO_REF:0000107
RGD
Ensembl
PMID:25009269 PMID:21873635 GO_REF:0000107 MGI:5605098, RGD:13792537 NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012
JBrowse link
G Sncg synuclein, gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:9,700,513...9,705,751
Ensembl chr16:9,700,514...9,705,368
JBrowse link
G Ston1 stonin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449
JBrowse link
G Ston2 stonin 2 involved_in IMP
ISS
IDA
ISO
IBA
PMID:22727701
GO_REF:0000024
UniProtKB:O14656 (PMID:21102408)
PMID:21873635
UniProt
RGD
PMID:21102408 PMID:22727701 PMID:22727701 PMID:21873635 GO_REF:0000024, RGD:12050122, RGD:12050122, RGD:13792537 NCBI chr 6:110,567,485...110,676,376
Ensembl chr 6:110,567,485...110,676,376
JBrowse link
G Stx1a syntaxin 1A involved_in ISO (PMID:26635000) RGD PMID:26635000 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Synj1 synaptojanin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IEA
GO_REF:0000024
MGI:2179801 (MGI:3797309|PMID:18093523)
PMID:21873635
GO_REF:0000002
UniProtKB:Q8CHC4 (PMID:18093523)
ParkinsonsUK-UCL
RGD
InterPro
PMID:18093523 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:3797309, RGD:13792537 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
G Synj2 synaptojanin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:46,518,594...46,621,919
Ensembl chr 1:46,518,709...46,633,687
JBrowse link
G Syp synaptophysin involved_in IEA
ISO
GO_REF:0000107
(MGI:5141572|PMID:21658579)
Ensembl
RGD
PMID:21658579 GO_REF:0000107 MGI:5141572 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Syt1 synaptotagmin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt2 synaptotagmin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt5 synaptotagmin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt8 synaptotagmin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
G Tbc1d24 TBC1 domain family, member 24 acts_upstream_of_or_within ISO MGI:5692831 (MGI:6279048|PMID:30335140) RGD PMID:30335140 MGI:6279048 NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3573806|PMID:15475946)
UniProt
RGD
PMID:15475946 GO_REF:0000024 MGI:3573806 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
synaptic vesicle exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apba1 amyloid beta precursor protein binding family A member 1 TAS RGD PMID:9395480 RGD:727250 NCBI chr 1:221,363,769...221,569,496
Ensembl chr 1:221,363,778...221,566,553
JBrowse link
G Apba2 amyloid beta precursor protein binding family A member 2 TAS RGD PMID:9395480 RGD:727250 NCBI chr 1:118,053,270...118,286,858
Ensembl chr 1:118,103,219...118,285,699
JBrowse link
G Cplx1 complexin 1 involved_in IDA
ISO
IBA
(MGI:3688343|PMID:15126625)
PMID:21873635
RGD PMID:15126625 PMID:11751907 PMID:21873635 MGI:3688343, RGD:727333, RGD:13792537 NCBI chr14:1,184,638...1,216,392 JBrowse link
G Cplx2 complexin 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11751907 PMID:21873635 RGD:727333, RGD:13792537 NCBI chr17:10,219,577...10,292,835
Ensembl chr17:10,222,347...10,293,855
JBrowse link
G Cplx3 complexin 3 involved_in IBA
ISO
PMID:21873635
(MGI:3582382|PMID:15911881)
RGD PMID:15911881 PMID:21873635 MGI:3582382, RGD:13792537 NCBI chr 8:58,003,535...58,010,297
Ensembl chr 8:58,003,535...58,010,297
JBrowse link
G Cplx4 complexin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:59,481,360...59,504,716
Ensembl chr18:59,481,986...59,497,778
JBrowse link
G Doc2a double C2 domain alpha IEP RGD PMID:10651871 RGD:1357914 NCBI chr 1:181,457,415...181,462,528
Ensembl chr 1:181,458,390...181,462,030
JBrowse link
G Otof otoferlin involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
(MGI:3692845|PMID:17055430), (MGI:3774237|PMID:18287496)
MGI:4950055 (MGI:5660467|PMID:25609709)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:17055430 PMID:18287496 PMID:25609709 GO_REF:0000002 GO_REF:0000024 MGI:3692845 MGI:3774237 MGI:5660467 NCBI chr 6:25,928,018...26,024,631
Ensembl chr 6:25,928,055...26,024,631
JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO (MGI:3529714|PMID:15713258) RGD PMID:15713258 MGI:3529714 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619
JBrowse link
G Ppfia3 PTPRF interacting protein alpha 3 involved_in ISO (MGI:6120581|PMID:29439199) RGD PMID:29439199 MGI:6120581 NCBI chr 1:95,817,110...95,845,950
Ensembl chr 1:95,817,110...95,845,798
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:16141272
MGI:3762127 (MGI:3762126|PMID:11359932)
RGD PMID:11359932 PMID:16141272 MGI:3762126, RGD:8693376 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IDA
ISO
EXP
PMID:8103915
(MGI:6189328|PMID:17728451)
RGD PMID:17728451 PMID:8103915 PMID:8103915 MGI:6189328, RGD:13702457, RGD:13702457 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snapin SNAP-associated protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:10195194)
RGD PMID:10195194 PMID:21873635 RGD:13792537 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:28288128) RGD PMID:28288128 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 involved_in IPI PMID:9826670 UniProt PMID:9826670 RGD:8553838 NCBI chr 1:202,002,970...202,045,343
Ensembl chr 1:202,002,970...202,044,283
JBrowse link
G Stx1a syntaxin 1A involved_in EXP
ISO
IDA
PMID:7901002
(MGI:5790510|PMID:27466336)
(PMID:26635000)
RGD PMID:26635000 PMID:27466336 PMID:7901002 PMID:7901002 MGI:5790510, RGD:13702440, RGD:13702440 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Stx1b syntaxin 1B involved_in ISO (MGI:5790510|PMID:27466336) RGD PMID:27466336 MGI:5790510 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stx7 syntaxin 7 TAS RGD PMID:11786915 RGD:634188 NCBI chr 1:21,197,075...21,237,320
Ensembl chr 1:21,197,075...21,237,279
JBrowse link
G Stxbp2 syntaxin binding protein 2 TAS RGD PMID:7768895 RGD:730001 NCBI chr12:1,689,364...1,701,145
Ensembl chr12:1,689,410...1,700,458
JBrowse link
G Syt1 synaptotagmin 1 acts_upstream_of_or_within TAS
ISO
MGI:1857252 (MGI:4879076|PMID:21040848) RGD PMID:21040848 PMID:2333096 MGI:4879076, RGD:729959 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt10 synaptotagmin 10 NOT|involved_in ISS
ISO
GO_REF:0000024
(MGI:5751674|PMID:21496647)
UniProt
RGD
PMID:21496647 GO_REF:0000024 MGI:5751674 NCBI chr 7:120,863,014...120,920,730
Ensembl chr 7:120,862,972...120,920,863
JBrowse link
G Syt2 synaptotagmin 2 TAS RGD PMID:1856191 RGD:729949 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt3 synaptotagmin 3 TAS RGD PMID:7791877 RGD:61762 NCBI chr 1:94,880,835...94,895,518
Ensembl chr 1:94,881,247...94,895,246
JBrowse link
G Trim9 tripartite motif-containing 9 IEP RGD PMID:11524423 RGD:631246 NCBI chr 6:88,756,824...88,856,588
Ensembl chr 6:88,757,303...88,856,542
JBrowse link
G Unc13a unc-13 homolog A involved_in ISO (MGI:1341485|PMID:10440375) RGD PMID:10440375 MGI:1341485 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B involved_in ISO (MGI:5795822|PMID:19700493) RGD PMID:19700493 MGI:5795822 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C involved_in IEA
ISO
GO_REF:0000107
(MGI:1929572|PMID:11150314)
Ensembl
RGD
PMID:11150314 GO_REF:0000107 MGI:1929572 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in
acts_upstream_of_or_within
IMP
ISO
ISS
IDA
PMID:1331807
(MGI:3573806|PMID:15475946)
MGI:2179745 (MGI:2153431|PMID:11691998)
GO_REF:0000024
RGD
UniProt
PMID:11691998 PMID:15475946 PMID:1331807 PMID:1331807 GO_REF:0000024 MGI:2153431 MGI:3573806, RGD:13702243, RGD:13702243 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
synaptic vesicle fusion to presynaptic active zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053516.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC103690878 syntaxin-3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:73,695,215...73,696,108
Ensembl chr  X:73,695,215...73,696,108
JBrowse link
G Prrt2 proline-rich transmembrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5792766|PMID:27052163)
UniProt
RGD
PMID:27052163 GO_REF:0000024 MGI:5792766 NCBI chr 1:181,625,243...181,628,905
Ensembl chr 1:181,604,545...181,628,850
JBrowse link
G Snap23 synaptosome associated protein 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:107,514,088...107,546,177 JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snap29 synaptosome associated protein 29 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
G Snap47 synaptosome associated protein 47 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:44,192,886...44,234,435
Ensembl chr10:44,191,218...44,234,424
JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4430710|PMID:19217378) RGD PMID:19217378 MGI:4430710 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Stx11 syntaxin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:7,293,427...7,320,060
Ensembl chr 1:7,289,976...7,320,164
JBrowse link
G Stx1a syntaxin 1A involved_in IBA
IGI
PMID:21873635
PMID:18703708
GO_Central
SynGO
PMID:21873635 PMID:18703708 RGD:13792537, RGD:11535099 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Stx1b syntaxin 1B involved_in IBA
ISO
PMID:21873635
(MGI:3803800|PMID:18703708), (MGI:5603022|PMID:24587181)
RGD PMID:18703708 PMID:24587181 PMID:21873635 MGI:3803800 MGI:5603022, RGD:13792537 NCBI chr 1:182,415,544...182,434,385
Ensembl chr 1:182,415,546...182,441,280
JBrowse link
G Stx2 syntaxin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:27,678,744...27,714,751
Ensembl chr12:27,689,819...27,714,751
JBrowse link
G Stx3 syntaxin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:208,617,018...208,686,240
Ensembl chr 1:208,639,115...208,685,805
JBrowse link
G Stx4 syntaxin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IC GO_REF:0000111 SynGO GO_REF:0000111 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2447864 (MGI:5006894|PMID:21378974)
(MGI:2182197|PMID:11182090)
Ensembl
RGD
PMID:11182090 PMID:21378974 GO_REF:0000107 MGI:2182197 MGI:5006894 NCBI chr16:29,127,419...29,200,133
Ensembl chr16:29,127,419...29,200,119
JBrowse link
G Slc17a7 solute carrier family 17 member 7 acts_upstream_of_or_within ISO MGI:3051945 (MGI:3836822|PMID:19169251) RGD PMID:19169251 MGI:3836822 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
synaptic vesicle priming term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053516.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Cadps calcium dependent secretion activator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2443963 (MGI:4879076|PMID:21040848)
UniProtKB:Q8BYR5 (MGI:3773298|PMID:18022372), (MGI:5617001|PMID:25374362)
Ensembl
RGD
PMID:18022372 PMID:21040848 PMID:25374362 GO_REF:0000107 MGI:3773298 MGI:4879076 MGI:5617001 NCBI chr15:12,289,803...12,742,786
Ensembl chr15:12,290,262...12,742,779
JBrowse link
G Cadps2 calcium dependent secretion activator 2 acts_upstream_of_or_within
involved_in
ISO MGI:1350922 (MGI:4879076|PMID:21040848)
UniProtKB:Q80TJ1 (MGI:5617001|PMID:25374362), (MGI:6189303|PMID:25437547)
RGD PMID:21040848 PMID:25374362 PMID:25437547 MGI:4879076 MGI:5617001 MGI:6189303 NCBI chr 4:51,780,415...52,309,641
Ensembl chr 4:51,781,053...52,309,829
JBrowse link
G Erc1 ELKS/RAB6-interacting/CAST family member 1 involved_in ISO (MGI:5882646|PMID:27253063) RGD PMID:27253063 MGI:5882646 NCBI chr 4:152,763,664...153,055,706
Ensembl chr 4:152,767,419...153,055,639
JBrowse link
G Erc2 ELKS/RAB6-interacting/CAST family member 2 involved_in ISO (MGI:4415657|PMID:19874790) RGD PMID:19874790 MGI:4415657 NCBI chr16:2,812,712...3,673,624
Ensembl chr16:2,848,620...3,670,776
JBrowse link
G Napa NSF attachment protein alpha involved_in ISO (MGI:4879076|PMID:21040848) RGD PMID:21040848 MGI:4879076 NCBI chr 1:76,787,036...76,805,869
Ensembl chr 1:76,786,932...76,805,869
JBrowse link
G Otof otoferlin involved_in IBA
ISO
PMID:21873635
(MGI:4461353|PMID:20562868)
RGD PMID:20562868 PMID:21873635 MGI:4461353, RGD:13792537 NCBI chr 6:25,928,018...26,024,631
Ensembl chr 6:25,928,055...26,024,631
JBrowse link
G Rims1 regulating synaptic membrane exocytosis 1 involved_in ISO (MGI:4887275|PMID:21262469), (MGI:5432438|PMID:22753485) RGD PMID:21262469 PMID:22753485 MGI:4887275 MGI:5432438 NCBI chr 9:24,696,959...25,196,368
Ensembl chr 9:24,698,854...25,196,631
JBrowse link
G Rims2 regulating synaptic membrane exocytosis 2 involved_in ISO (MGI:5432438|PMID:22753485) RGD PMID:22753485 MGI:5432438 NCBI chr 7:70,248,104...70,759,134
Ensembl chr 7:70,243,872...70,757,491
JBrowse link
G Snap23 synaptosome associated protein 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:107,514,088...107,546,177 JBrowse link
G Snap25 synaptosome associated protein 25 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Snap29 synaptosome associated protein 29 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:83,578,479...83,608,953
Ensembl chr11:83,578,489...83,608,958
JBrowse link
G Snap47 synaptosome associated protein 47 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:44,192,886...44,234,435
Ensembl chr10:44,191,218...44,234,424
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:30404828) RGD PMID:30404828 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Stxbp1 syntaxin binding protein 1 involved_in ISO (MGI:3695670|PMID:17110441) RGD PMID:17110441 MGI:3695670 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Sv2a synaptic vesicle glycoprotein 2a involved_in ISO (MGI:3831988|PMID:19176798) RGD PMID:19176798 MGI:3831988 NCBI chr 2:183,741,455...183,757,290
Ensembl chr 2:183,741,547...183,756,927
JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO MGI:2179801 (MGI:2447947|PMID:12481038) RGD PMID:12481038 MGI:2447947 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
G Unc13a unc-13 homolog A involved_in IDA
ISO
IEA
IBA
UniProtKB:Q9Z1N9 (MGI:2158113|PMID:11832228), (MGI:5617001|PMID:25374362)
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:11832228 PMID:25374362 PMID:21499244 PMID:21873635 GO_REF:0000002 MGI:2158113 MGI:5617001, RGD:5686389, RGD:13792537 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
IMP
GO_REF:0000024
UniProtKB:Q4KUS2 (MGI:2158113|PMID:11832228), (MGI:5617001|PMID:25374362)
MGI:2449706 (MGI:2181453|PMID:12070347)
PMID:21873635
PMID:22966208
ParkinsonsUK-UCL
RGD
PMID:11832228 PMID:12070347 PMID:25374362 PMID:21873635 PMID:22966208 GO_REF:0000024 MGI:2158113 MGI:2181453 MGI:5617001, RGD:13792537, RGD:11535109 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C involved_in IMP
IBA
PMID:22966208
PMID:21873635
ParkinsonsUK-UCL
GO_Central
PMID:22966208 PMID:21873635 RGD:11535109, RGD:13792537 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
synaptic vesicle recycling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 acts_upstream_of_or_within ISO MGI:5620801 (MGI:5617942|PMID:20203623) RGD PMID:20203623 MGI:5617942 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262
JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IMP PMID:16141272 ParkinsonsUK-UCL PMID:16141272 RGD:8693376 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:16141272) RGD PMID:16141272 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5560382|PMID:24569478)
UniProt
RGD
PMID:24569478 GO_REF:0000024 MGI:5560382 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
synaptic vesicle recycling via endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISS
ISO
GO_REF:0000024
(MGI:6104538|PMID:29262337)
UniProt
RGD
PMID:29262337 GO_REF:0000024 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Dnm1l dynamin 1-like involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Tbc1d24 TBC1 domain family, member 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
JBrowse link
synaptic vesicle targeting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3694190|PMID:10892652)
UniProt
RGD
PMID:10892652 GO_REF:0000024 MGI:3694190 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) involved_in NAS PMID:10707984 UniProt PMID:10707984 RGD:69383 NCBI chr 4:19,691,439...20,050,015
Ensembl chr 4:19,695,315...20,049,885
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (MGI:2664026|PMID:12805290) RGD PMID:12805290 MGI:2664026 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) RGD PMID:19458197 MGI:4365512 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IBA
ISO
PMID:21873635
(MGI:4439191|PMID:20160091)
RGD PMID:20160091 PMID:21873635 MGI:4439191, RGD:13792537 NCBI chr 5:116,120,069...116,283,448
Ensembl chr 5:116,119,676...116,283,448
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IC PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in ISO UniProtKB:Q62420|UniProtKB:Q62421 (MGI:5300660|PMID:22099461) RGD PMID:22099461 MGI:5300660 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO UniProtKB:Q62419|UniProtKB:Q62421 (MGI:5300660|PMID:22099461) RGD PMID:22099461 MGI:5300660 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in ISO UniProtKB:Q62419|UniProtKB:Q62420 (MGI:5300660|PMID:22099461) RGD PMID:22099461 MGI:5300660 NCBI chr 1:136,124,502...136,255,669
Ensembl chr 1:136,124,499...136,255,584
JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within
involved_in
ISO MGI:2179801 (MGI:2447947|PMID:12481038)
(MGI:1346710|PMID:10535736), (MGI:5300660|PMID:22099461)
RGD PMID:10535736 PMID:12481038 PMID:22099461 MGI:1346710 MGI:2447947 MGI:5300660 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19504
    cellular process 18357
      vesicle-mediated transport 1674
        vesicle-mediated transport in synapse 275
          endocytosed synaptic vesicle processing via endosome 0
          postsynaptic dense core vesicle exocytosis + 0
          postsynaptic endocytosis + 30
          presynaptic endocytosis + 75
          synaptic vesicle budding from endosome 4
          synaptic vesicle cycle + 247
          synaptic vesicle exocytosis + 154
Path 2
Term Annotations click to browse term
  biological_process 19504
    localization 6451
      establishment of localization 4866
        transport 4702
          vesicle-mediated transport 1674
            vesicle-mediated transport in synapse 275
              endocytosed synaptic vesicle processing via endosome 0
              postsynaptic dense core vesicle exocytosis + 0
              postsynaptic endocytosis + 30
              presynaptic endocytosis + 75
              synaptic vesicle budding from endosome 4
              synaptic vesicle cycle + 247
              synaptic vesicle exocytosis + 154
paths to the root