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ONTOLOGY REPORT - ANNOTATIONS


Term:perisynaptic extracellular matrix
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Accession:GO:0098966 term browser browse the term
Definition:The portion of the extracellular matrix that lies within the perisynaptic space.
Synonyms:exact_synonym: extrasynaptic extracellular matrix;   perisynaptic ECM


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perisynaptic extracellular matrix term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan is_active_in ISO (MGI:6189263|PMID:27615741) SynGO PMID:27615741 MGI:6189263 NCBI chrNW_004955416:16,125,536...16,186,046 JBrowse link
G Bcan brevican is_active_in ISO PMID:10414531
PMID:16503162
SynGO PMID:10414531 PMID:16503162 RGD:13702202 RGD:13702210 NCBI chrNW_004955545:2,723,780...2,739,334
Ensembl chrNW_004955545:2,723,780...2,739,450
JBrowse link
G Ncan neurocan is_active_in ISO (MGI:6162908|PMID:29670169), (MGI:6763867|PMID:30356641) SynGO PMID:29670169 PMID:30356641 MGI:6162908 MGI:6763867 NCBI chrNW_004955524:2,602,767...2,628,771
Ensembl chrNW_004955524:2,602,715...2,628,805
JBrowse link
G Tnc tenascin C is_active_in ISO (MGI:6189245|PMID:16452087) SynGO PMID:16452087 MGI:6189245 NCBI chrNW_004955419:12,569,620...12,662,897
Ensembl chrNW_004955419:12,569,547...12,662,958
JBrowse link
G Tnr tenascin R is_active_in ISO PMID:11598921 SynGO PMID:11598921 RGD:13702357 NCBI chrNW_004955406:15,007,248...15,512,219
Ensembl chrNW_004955406:15,088,843...15,282,937
JBrowse link
perineuronal net term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan ISO RGD PMID:18364019 RGD:2315810 NCBI chrNW_004955416:16,125,536...16,186,046 JBrowse link
G Bcan brevican located_in ISO MMO:0000669
(MGI:2677604|PMID:14550776), (MGI:6192419|PMID:22121037)
RGD
UniProt
PMID:14550776 PMID:16644727 PMID:22121037 MGI:2677604 MGI:6192419 RGD:9589827 NCBI chrNW_004955545:2,723,780...2,739,334
Ensembl chrNW_004955545:2,723,780...2,739,450
JBrowse link
G Hapln4 hyaluronan and proteoglycan link protein 4 located_in ISO (MGI:2677604|PMID:14550776), (MGI:6192419|PMID:22121037) UniProt PMID:14550776 PMID:22121037 MGI:2677604 MGI:6192419 NCBI chrNW_004955524:2,594,097...2,598,855
Ensembl chrNW_004955524:2,595,426...2,598,861
JBrowse link
G Ncan neurocan ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chrNW_004955524:2,602,767...2,628,771
Ensembl chrNW_004955524:2,602,715...2,628,805
JBrowse link
G Ptprz1 protein tyrosine phosphatase receptor type Z1 located_in ISO (MGI:1858374|PMID:10793198) RGD
MGI
PMID:10793198 PMID:16644727 MGI:1858374 RGD:9589827 NCBI chrNW_004955479:3,611,658...3,734,225
Ensembl chrNW_004955479:3,624,993...3,733,183
JBrowse link
G Tnr tenascin R located_in ISO (MGI:1337730|PMID:10341229), (MGI:6830496|PMID:8244531) MGI PMID:8244531 PMID:10341229 MGI:1337730 MGI:6830496 NCBI chrNW_004955406:15,007,248...15,512,219
Ensembl chrNW_004955406:15,088,843...15,282,937
JBrowse link
G Vcan versican ISO MMO:0000669,MMO:0000662 RGD PMID:16644727 RGD:9589827 NCBI chrNW_004955418:26,967,595...27,078,430 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12524
    cellular anatomical entity 12367
      external encapsulating structure 262
        extracellular matrix 261
          collagen-containing extracellular matrix 184
            perisynaptic extracellular matrix 8
              perineuronal net 7
Path 2
Term Annotations click to browse term
  cellular_component 12524
    cellular anatomical entity 12367
      cell periphery 3655
        external encapsulating structure 262
          extracellular matrix 261
            collagen-containing extracellular matrix 184
              synapse-associated extracellular matrix 10
                perisynaptic extracellular matrix 8
                  perineuronal net 7
paths to the root