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ONTOLOGY REPORT - ANNOTATIONS


Term:cluster of actin-based cell projections
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Accession:GO:0098862 term browser browse the term
Definition:A cell part consisting of multiple, closely packed actin-based cell projections.



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Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 located_in IEA
ISO
GO_REF:0000107
(MGI:5621262|PMID:22114352)
Ensembl
RGD
PMID:22114352 GO_REF:0000107 MGI:5621262 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Actn3 actinin alpha 3 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Actr3 actin related protein 3 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Add3 adducin 3 located_in IEA
ISO
GO_REF:0000107
(MGI:5621262|PMID:22114352)
Ensembl
RGD
PMID:22114352 GO_REF:0000107 MGI:5621262 NCBI chr 1:252,147,341...252,255,126
Ensembl chr 1:252,147,386...252,255,124
JBrowse link
G Alpp alkaline phosphatase, placental located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:87,765,846...87,768,606
Ensembl chr 9:87,765,860...87,768,606
JBrowse link
G Anks4b ankyrin repeat and sterile alpha motif domain containing 4B located_in ISO (PMID:26812018)
(MGI:5763318|PMID:26812018)
RGD PMID:26812018 MGI:5763318 NCBI chr 1:174,534,195...174,557,798
Ensembl chr 1:174,547,473...174,557,797
JBrowse link
G Aqp1 aquaporin 1 located_in ISO
IDA
(PMID:16133142), (PMID:16814974)
(MGI:3608308|PMID:16133142)
RGD PMID:16133142 PMID:16814974 PMID:16133142 MGI:3608308, RGD:8553876 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 located_in ISO (MGI:2153243|PMID:11495928) RGD PMID:11495928 MGI:2153243 NCBI chr 4:66,760,159...66,842,110
Ensembl chr 4:66,760,159...66,842,110
JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 2:192,319,696...192,364,755
Ensembl chr 2:192,319,702...192,364,480
JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 4:45,978,142...46,014,032
Ensembl chr 4:45,977,807...46,013,864
JBrowse link
G Capzb capping actin protein of muscle Z-line subunit beta located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 5:151,435,600...151,535,409
Ensembl chr 5:151,434,871...151,535,409
JBrowse link
G Cdhr2 cadherin-related family member 2 located_in ISO (PMID:21330445) RGD PMID:21330445 NCBI chr17:9,876,853...9,913,356
Ensembl chr17:9,876,860...9,912,575
JBrowse link
G Cdhr5 cadherin-related family member 5 located_in ISO (PMID:21330445) RGD PMID:21330445 NCBI chr 1:196,373,110...196,381,609
Ensembl chr 1:196,373,112...196,381,543
JBrowse link
G Cgn cingulin located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 2:182,308,389...182,335,747
Ensembl chr 2:182,308,714...182,334,645
JBrowse link
G Coro2a coronin 2A located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 5:60,825,630...60,881,917
Ensembl chr 5:60,828,247...60,859,035
JBrowse link
G Cubn cubilin located_in IEA
ISO
GO_REF:0000107
(MGI:2667584|PMID:12815097)
Ensembl
RGD
PMID:12815097 GO_REF:0000107 MGI:2667584 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
JBrowse link
G Dab1 DAB adaptor protein 1 IDA RGD PMID:19946030 RGD:2317766 NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase located_in ISO (MGI:2179664|PMID:11882650) RGD PMID:11882650 MGI:2179664 NCBI chr10:106,006,404...106,008,294 JBrowse link
G Ddr1 discoidin domain receptor tyrosine kinase 1 IDA RGD PMID:23195037 RGD:13508622 NCBI chr20:3,042,494...3,064,442
Ensembl chr20:3,044,320...3,064,468
JBrowse link
G Diaph1 diaphanous-related formin 1 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr18:29,669,659...29,769,044
Ensembl chr18:29,669,659...29,769,172
JBrowse link
G Dnm1l dynamin 1-like located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Enpep glutamyl aminopeptidase located_in IEA
ISO
GO_REF:0000107
(MGI:3624074|PMID:16286663)
Ensembl
RGD
PMID:16286663 GO_REF:0000107 MGI:3624074 NCBI chr 2:217,781,985...217,851,947
Ensembl chr 2:217,782,005...217,851,947
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Espn espin located_in IDA
ISO
PMID:9763424
(MGI:5621262|PMID:22114352)
RGD PMID:22114352 PMID:9763424 MGI:5621262, RGD:632659 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Ezr ezrin located_in ISO (MGI:5576844|PMID:24284068), (MGI:5621262|PMID:22114352) RGD PMID:22114352 PMID:24284068 MGI:5576844 MGI:5621262 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Flii FLII, actin remodeling protein located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr10:45,394,032...45,408,051
Ensembl chr10:45,394,032...45,407,970
JBrowse link
G Flna filamin A located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Flnb filamin B located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr15:16,961,999...17,095,059
Ensembl chr15:16,962,003...17,095,006
JBrowse link
G Folr1 folate receptor alpha IDA RGD PMID:10751329 RGD:1358236 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 IDA RGD PMID:11912251 RGD:2303813 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 located_in ISO (MGI:6282238|PMID:29402223) RGD PMID:29402223 MGI:6282238 NCBI chr10:31,118,667...31,151,730
Ensembl chr10:31,119,088...31,151,698
JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor, type 3 located_in IDA PMID:8288584 BHF-UCL PMID:8288584 RGD:8553539 NCBI chr20:5,136,968...5,202,339
Ensembl chr20:5,136,441...5,202,337
JBrowse link
G Lct lactase IDA RGD PMID:12023280 RGD:1299293 NCBI chr13:39,781,929...39,824,456
Ensembl chr13:39,781,929...39,824,456
JBrowse link
G Lctl lactase-like located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:64,618,356...64,654,851
Ensembl chr 8:64,618,350...64,639,357
JBrowse link
G Lima1 LIM domain and actin binding 1 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 7:130,901,717...131,001,573
Ensembl chr 7:130,901,717...131,001,473
JBrowse link
G LOC120093064 scavenger receptor cysteine-rich domain-containing protein SCART1-like located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:195,080,285...195,136,263
Ensembl chr 1:195,039,123...195,136,263
JBrowse link
G Lrp2 LDL receptor related protein 2 located_in IDA
ISO
(MGI:2667584|PMID:12815097) RGD PMID:12815097 PMID:11912251 MGI:2667584, RGD:2303813 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Mme membrane metallo-endopeptidase located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22272689)
UniProt
Ensembl
RGD
PMID:22272689 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
JBrowse link
G Myh10 myosin heavy chain 10 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
JBrowse link
G Myh11 myosin heavy chain 11 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr10:743,364...838,459
Ensembl chr10:743,685...838,459
JBrowse link
G Myh14 myosin heavy chain 14 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 1:95,096,266...95,158,861
Ensembl chr 1:95,096,266...95,158,836
JBrowse link
G Myh9 myosin, heavy chain 9 located_in IDA
IEA
ISO
GO_REF:0000107
(MGI:5621262|PMID:22114352)
Ensembl
RGD
PMID:22114352 PMID:22357915 GO_REF:0000107 MGI:5621262, RGD:7243154 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Myl6 myosin light chain 6 located_in ISO (PMID:22114352) RGD PMID:22114352 NCBI chr 7:910,764...914,062
Ensembl chr 7:910,774...933,791
JBrowse link
G Myo15b myosin XVB located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr10:101,088,904...101,126,159
Ensembl chr10:101,104,209...101,125,693
JBrowse link
G Myo18a myosin XVIIIa located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr10:62,654,218...62,755,464
Ensembl chr10:62,654,281...62,755,468
JBrowse link
G Myo1a myosin IA located_in
is_active_in
NAS
IEA
IBA
ISO
ISS
IDA
GO_REF:0000107
PMID:21873635
(MGI:3587467|PMID:15758024), (MGI:5607232|PMID:20089841), (MGI:5621262|PMID:22114352)
(PMID:9858156)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9858156 PMID:15758024 PMID:20089841 PMID:22114352 PMID:7779104 More... GO_REF:0000024 GO_REF:0000107 MGI:3587467 MGI:5607232 MGI:5621262, RGD:69898, RGD:13792537, RGD:1581729 NCBI chr 7:63,542,988...63,557,944
Ensembl chr 7:63,542,988...63,557,944
JBrowse link
G Myo1b myosin Ib is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(MGI:5621262|PMID:22114352)
RGD PMID:22114352 PMID:11546671 PMID:21873635 MGI:5621262, RGD:628448, RGD:13792537 NCBI chr 9:49,690,043...49,852,373
Ensembl chr 9:49,690,086...49,850,798
JBrowse link
G Myo1c myosin 1C located_in ISO (MGI:3587467|PMID:15758024), (MGI:5607232|PMID:20089841), (MGI:5621262|PMID:22114352) RGD PMID:15758024 PMID:20089841 PMID:22114352 MGI:3587467 MGI:5607232 MGI:5621262 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Myo1d myosin ID located_in IDA
ISO
PMID:20089841
(MGI:5607225|PMID:21330445), (MGI:5621262|PMID:22114352)
RGD PMID:21330445 PMID:22114352 PMID:20089841 MGI:5607225 MGI:5621262, RGD:10047169 NCBI chr10:65,489,153...65,765,812
Ensembl chr10:65,489,154...65,766,349
JBrowse link
G Myo1e myosin IE located_in ISO (MGI:5607232|PMID:20089841), (MGI:5621262|PMID:22114352) RGD PMID:20089841 PMID:22114352 MGI:5607232 MGI:5621262 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
JBrowse link
G Myo5b myosin Vb located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
JBrowse link
G Myo6 myosin VI located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Myo7b myosin VIIb located_in ISO (PMID:24725409)
(MGI:5578666|PMID:24725409), (MGI:5621262|PMID:22114352)
RGD PMID:22114352 PMID:24725409 MGI:5578666 MGI:5621262 NCBI chr18:23,588,307...23,669,841
Ensembl chr18:23,588,307...23,669,809
JBrowse link
G Nppa natriuretic peptide A located_in IDA PMID:1372667 UniProt PMID:1372667 RGD:14929205 NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351
JBrowse link
G Olr292 olfactory receptor 292 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:195,209,804...195,210,721
Ensembl chr 1:195,208,141...195,212,120
JBrowse link
G Pdzd3 PDZ domain containing 3 located_in ISO (PMID:19088451)
(MGI:3844789|PMID:19088451)
RGD PMID:19088451 MGI:3844789 NCBI chr 8:44,584,390...44,588,838
Ensembl chr 8:44,584,390...44,588,860
JBrowse link
G Pdzk1 PDZ domain containing 1 located_in ISO (PMID:9461128) RGD PMID:9461128 NCBI chr 2:184,376,161...184,407,514
Ensembl chr 2:184,376,161...184,407,514
JBrowse link
G Plec plectin located_in IEA
ISO
GO_REF:0000107
(MGI:5621262|PMID:22114352)
Ensembl
RGD
PMID:22114352 GO_REF:0000107 MGI:5621262 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Pls1 plastin 1 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Prom1 prominin 1 located_in ISO (MGI:1099557|PMID:9356465) RGD PMID:9356465 MGI:1099557 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Ralgds ral guanine nucleotide dissociation stimulator located_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr 3:11,839,686...11,880,059
Ensembl chr 3:11,839,416...11,880,059
JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 IDA RGD PMID:18495799 RGD:2314762 NCBI chr 3:56,809,388...57,101,332
Ensembl chr 3:56,809,270...57,102,316
JBrowse link
G Rgs19 regulator of G-protein signaling 19 IDA RGD PMID:11912251 RGD:2303813 NCBI chr 3:168,804,532...168,813,035
Ensembl chr 3:168,804,874...168,810,097
JBrowse link
G Scart1 scavenger receptor family member expressed on T-cells 1 located_in ISO (PMID:22795646) RGD PMID:22795646 NCBI chr 1:195,020,750...195,031,807
Ensembl chr 1:195,020,750...195,031,807
JBrowse link
G Scin scinderin located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 6:57,110,128...57,188,059
Ensembl chr 6:57,109,403...57,188,242
JBrowse link
G Si sucrase-isomaltase IDA RGD PMID:15138292 RGD:1581729 NCBI chr 2:157,505,893...157,586,228
Ensembl chr 2:157,506,342...157,585,260
JBrowse link
G Slc11a2 solute carrier family 11 member 2 located_in ISO (MGI:3619154|PMID:11090085) RGD PMID:11090085 MGI:3619154 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
G Slc15a1 solute carrier family 15 member 1 located_in IEA
ISO
GO_REF:0000107
(MGI:5621262|PMID:22114352)
Ensembl
RGD
PMID:22114352 GO_REF:0000107 MGI:5621262 NCBI chr15:98,537,641...98,582,544
Ensembl chr15:98,537,641...98,582,545
JBrowse link
G Slc23a1 solute carrier family 23 member 1 located_in IDA PMID:16673096 UniProt PMID:16673096 RGD:8554652 NCBI chr18:27,214,940...27,230,564
Ensembl chr18:27,216,281...27,230,697
JBrowse link
G Slc2a2 solute carrier family 2 member 2 located_in IDA
ISO
(MGI:3525383|PMID:15601832) RGD PMID:15601832 PMID:12095416 MGI:3525383, RGD:625552 NCBI chr 2:111,609,798...111,639,930
Ensembl chr 2:111,611,774...111,639,933
JBrowse link
G Slc34a1 solute carrier family 34 member 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852
JBrowse link
G Slc34a2 solute carrier family 34 member 2 located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(MGI:2675865|PMID:12773415)
Ensembl
RGD
PMID:12773415 PMID:21873635 GO_REF:0000107 MGI:2675865, RGD:13792537 NCBI chr14:57,910,931...57,930,236
Ensembl chr14:57,910,480...57,930,436
JBrowse link
G Slc34a3 solute carrier family 34 member 3 located_in
is_active_in
ISO
IBA
(MGI:2157079|PMID:12690469)
PMID:21873635
RGD PMID:12690469 PMID:21873635 MGI:2157079, RGD:13792537 NCBI chr 3:8,044,294...8,050,034
Ensembl chr 3:8,044,296...8,049,970
JBrowse link
G Slc38a2 solute carrier family 38, member 2 IDA RGD PMID:20338592 RGD:9999218 NCBI chr 7:127,851,267...127,863,482
Ensembl chr 7:127,851,267...127,863,436
JBrowse link
G Slc5a1 solute carrier family 5 member 1 located_in ISO (MGI:3525383|PMID:15601832) RGD PMID:15601832 MGI:3525383 NCBI chr14:77,553,990...77,618,589
Ensembl chr14:77,553,843...77,618,547
JBrowse link
G Slc9a3 solute carrier family 9 member A3 IDA RGD PMID:11880335 RGD:737665 NCBI chr 1:29,124,633...29,167,912
Ensembl chr 1:29,124,674...29,167,417
JBrowse link
G Snx5 sorting nexin 5 IDA RGD PMID:23195037 RGD:13508622 NCBI chr 3:131,621,709...131,641,205
Ensembl chr 3:131,621,880...131,641,192
JBrowse link
G Soat2 sterol O-acyltransferase 2 located_in ISO
IEA
(PMID:14615411)
GO_REF:0000107
RGD
Ensembl
PMID:14615411 GO_REF:0000107 NCBI chr 7:133,281,818...133,294,915
Ensembl chr 7:133,281,818...133,294,915
JBrowse link
G Tpm3 tropomyosin 3 located_in IDA PMID:22114352 UniProt PMID:22114352 RGD:10047239 NCBI chr 2:175,517,198...175,545,014
Ensembl chr 2:175,517,226...175,545,013
JBrowse link
G Ush1c USH1 protein network component harmonin located_in ISO (PMID:21330445), (PMID:24725409)
(MGI:5578666|PMID:24725409), (MGI:5621262|PMID:22114352)
RGD PMID:21330445 PMID:22114352 PMID:24725409 MGI:5578666 MGI:5621262 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Vcl vinculin located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
JBrowse link
G Vil1 villin 1 located_in ISO (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link
brush border membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IDA RGD PMID:26367854 RGD:11041116 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IDA RGD PMID:16899240 RGD:1598605 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 located_in ISS
ISO
GO_REF:0000024
(PMID:19506252)
UniProt
RGD
PMID:19506252 GO_REF:0000024 NCBI chr 4:87,676,241...87,802,757
Ensembl chr 4:87,745,319...87,802,409
JBrowse link
G Ace angiotensin I converting enzyme IDA RGD PMID:2827504 RGD:8142378 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Ace2 angiotensin I converting enzyme 2 part_of
located_in
ISO
IEA
(PMID:25534429)
GO_REF:0000107
(MGI:3838678|PMID:19185582)
RGD
Ensembl
PMID:19185582 PMID:25534429 GO_REF:0000107 MGI:3838678 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977
JBrowse link
G Amn amnion associated transmembrane protein IDA RGD PMID:17990981 RGD:2317831 NCBI chr 6:130,311,372...130,318,815
Ensembl chr 6:130,311,372...130,318,815
JBrowse link
G Anpep alanyl aminopeptidase, membrane IDA RGD PMID:12110004 RGD:1626500 NCBI chr 1:133,767,332...133,810,137
Ensembl chr 1:133,767,332...133,785,789
JBrowse link
G Aqp1 aquaporin 1 located_in ISO
ISS
(PMID:9013443)
GO_REF:0000024
RGD
UniProt
PMID:9013443 GO_REF:0000024 NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
JBrowse link
G Aqp7 aquaporin 7 IDA RGD PMID:10940724 RGD:1626293 NCBI chr 5:56,171,649...56,186,642
Ensembl chr 5:56,172,519...56,186,642
JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 located_in ISO (PMID:14638902) RGD PMID:14638902 NCBI chr 4:66,760,159...66,842,110
Ensembl chr 4:66,760,159...66,842,110
JBrowse link
G Atp7a ATPase copper transporting alpha IDA RGD PMID:16081413 RGD:1581810 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 IDA RGD PMID:11584374 RGD:1599400 NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 located_in IEA
ISO
GO_REF:0000107
(PMID:3917437)
Ensembl
RGD
PMID:3917437 GO_REF:0000107 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Ca4 carbonic anhydrase 4 located_in ISO (PMID:17409381) RGD PMID:17409381 NCBI chr10:69,827,945...69,836,501
Ensembl chr10:69,827,945...69,836,501
JBrowse link
G Cd36 CD36 molecule located_in IDA
ISO
PMID:21610069
(MGI:5693361|PMID:21610069)
RGD PMID:21610069 PMID:21610069 MGI:5693361, RGD:10402038 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cdhr2 cadherin-related family member 2 located_in ISO (PMID:24725409) RGD PMID:24725409 NCBI chr17:9,876,853...9,913,356
Ensembl chr17:9,876,860...9,912,575
JBrowse link
G Cdhr5 cadherin-related family member 5 located_in ISO
ISS
(PMID:24725409)
GO_REF:0000024
RGD
UniProt
PMID:24725409 GO_REF:0000024 NCBI chr 1:196,373,110...196,381,609
Ensembl chr 1:196,373,112...196,381,543
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 located_in ISO (MGI:73162|PMID:1648219) RGD PMID:1648219 MGI:73162 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Cltrn collectrin, amino acid transport regulator located_in ISO (MGI:3696607|PMID:17167413) RGD PMID:17167413 MGI:3696607 NCBI chr  X:30,361,967...30,395,264
Ensembl chr  X:30,361,967...30,395,349
JBrowse link
G Cubn cubilin located_in IDA PMID:12724130 RGD
UniProt
PMID:17990981 PMID:12724130 RGD:2317831, RGD:1299150 NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
JBrowse link
G Cybrd1 cytochrome b reductase 1 located_in ISS
ISO
GO_REF:0000024
(MGI:2654570|PMID:11230685)
(PMID:12949720)
UniProt
RGD
PMID:11230685 PMID:12949720 GO_REF:0000024 MGI:2654570 NCBI chr 3:55,934,874...55,962,132
Ensembl chr 3:55,934,874...55,962,108
JBrowse link
G Drd5 dopamine receptor D5 located_in IDA
ISO
IEA
(MGI:3526585|PMID:15598876)
GO_REF:0000107
RGD
Ensembl
PMID:15598876 PMID:12623966 GO_REF:0000107 MGI:3526585, RGD:730287 NCBI chr14:72,489,347...72,490,774
Ensembl chr14:72,489,347...72,490,774
JBrowse link
G Enpep glutamyl aminopeptidase IDA RGD PMID:12110004 RGD:1626500 NCBI chr 2:217,781,985...217,851,947
Ensembl chr 2:217,782,005...217,851,947
JBrowse link
G Folr1 folate receptor alpha IDA RGD PMID:8447363 RGD:7244265 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
JBrowse link
G Gna12 G protein subunit alpha 12 is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12623966 PMID:21873635 RGD:730287, RGD:13792537 NCBI chr12:13,805,580...13,886,255
Ensembl chr12:13,805,698...13,886,255
JBrowse link
G Gna13 G protein subunit alpha 13 is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12623966 PMID:21873635 RGD:730287, RGD:13792537 NCBI chr10:94,337,939...94,370,774
Ensembl chr10:94,337,725...94,370,774
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IDA RGD PMID:15497505 RGD:2316936 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 IDA RGD PMID:15497505 RGD:2316936 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Itln1 intelectin 1 located_in ISO (MGI:3654560|PMID:16866365) RGD PMID:16866365 MGI:3654560 NCBI chr13:83,932,234...83,958,243
Ensembl chr13:83,948,124...83,958,227
JBrowse link
G Kcnk1 potassium two pore domain channel subfamily K member 1 IDA RGD PMID:9843722 RGD:2316520 NCBI chr19:53,959,411...53,997,726
Ensembl chr19:53,959,657...53,997,724
JBrowse link
G Lima1 LIM domain and actin binding 1 located_in ISO (MGI:6160379|PMID:29880681) RGD PMID:29880681 MGI:6160379 NCBI chr 7:130,901,717...131,001,573
Ensembl chr 7:130,901,717...131,001,473
JBrowse link
G Lrp2 LDL receptor related protein 2 located_in IDA
ISO
(MGI:1353208|PMID:10662735)
PMID:12724130
PMID:6752952
RGD PMID:10662735 PMID:17453355 PMID:12724130 PMID:6752952 MGI:1353208, RGD:1641828, RGD:1299150, RGD:13210560 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Mfsd10 major facilitator superfamily domain containing 10 located_in
is_active_in
ISO
IBA
(MGI:3804787|PMID:18638446)
PMID:21873635
RGD PMID:18638446 PMID:21873635 MGI:3804787, RGD:13792537 NCBI chr14:76,103,762...76,107,385
Ensembl chr14:76,103,815...76,107,377
JBrowse link
G Mttp microsomal triglyceride transfer protein IDA RGD PMID:15383310 RGD:1582565 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239
JBrowse link
G Muc3 mucin 3, intestinal located_in ISO (MGI:3774061|PMID:17990980) RGD PMID:17990980 MGI:3774061 NCBI chr12:19,527,251...19,536,924
Ensembl chr12:19,527,321...19,538,522
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 IDA RGD PMID:15777641 RGD:1642189 NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:7639720 RGD:10448282 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201
JBrowse link
G Pdzk1 PDZ domain containing 1 located_in ISS
ISO
GO_REF:0000024
(MGI:3603991|PMID:16141316), (MGI:3850620|PMID:15523054)
UniProt
RGD
PMID:15523054 PMID:16141316 GO_REF:0000024 MGI:3603991 MGI:3850620 NCBI chr 2:184,376,161...184,407,514
Ensembl chr 2:184,376,161...184,407,514
JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:17614848 RGD:1642368 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013
JBrowse link
G Pex19 peroxisomal biogenesis factor 19 IDA RGD PMID:14558883 RGD:1625491 NCBI chr13:84,592,277...84,608,793
Ensembl chr13:84,592,312...84,608,608
JBrowse link
G Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta IDA RGD PMID:11931646 RGD:633612 NCBI chr 8:99,594,600...99,699,772
Ensembl chr 8:99,594,644...99,699,663
JBrowse link
G Plb1 phospholipase B1 is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:1716922 PMID:21873635 PMID:8117729 RGD:6903950, RGD:13792537, RGD:6903951 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117
JBrowse link
G Pld2 phospholipase D2 located_in ISO (MGI:3526585|PMID:15598876) RGD PMID:15598876 MGI:3526585 NCBI chr10:55,256,326...55,274,192
Ensembl chr10:55,256,359...55,272,808
JBrowse link
G Prkcb protein kinase C, beta IDA RGD PMID:17272350 RGD:2308883 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536
JBrowse link
G Ptger3 prostaglandin E receptor 3 IDA RGD PMID:15292051 RGD:10003094 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Pth1r parathyroid hormone 1 receptor IDA RGD PMID:12647298 RGD:1599981 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IDA RGD PMID:18495799 RGD:2314762 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 IDA RGD PMID:15917299 RGD:7243142 NCBI chr 1:199,146,210...199,590,962
Ensembl chr 1:199,169,429...199,589,394
JBrowse link
G Slc11a2 solute carrier family 11 member 2 located_in IEA
ISO
GO_REF:0000107
UniProtKB:P20722 (MGI:4352622|PMID:19252488)
Ensembl
RGD
PMID:19252488 GO_REF:0000107 MGI:4352622 NCBI chr 7:131,503,076...131,540,246
Ensembl chr 7:131,503,081...131,540,145
JBrowse link
G Slc19a1 solute carrier family 19 member 1 IDA RGD PMID:23287122 RGD:7244264 NCBI chr20:11,584,410...11,602,429
Ensembl chr20:11,584,411...11,601,972
JBrowse link
G Slc22a12 solute carrier family 22 member 12 located_in ISS
ISO
GO_REF:0000024
(MGI:3688377|PMID:14747372)
UniProt
RGD
PMID:14747372 GO_REF:0000024 MGI:3688377 NCBI chr 1:203,845,039...203,852,496
Ensembl chr 1:203,845,048...203,853,555
JBrowse link
G Slc22a5 solute carrier family 22 member 5 located_in ISO (PMID:15238359)
(MGI:3850620|PMID:15523054)
RGD PMID:15238359 PMID:15523054 MGI:3850620 NCBI chr10:38,008,303...38,035,474
Ensembl chr10:38,008,311...38,035,309
JBrowse link
G Slc26a3 solute carrier family 26 member 3 IDA RGD PMID:11875004 RGD:727349 NCBI chr 6:48,023,892...48,064,829
Ensembl chr 6:48,023,892...48,064,772
JBrowse link
G Slc26a4 solute carrier family 26 member 4 located_in ISS
ISO
GO_REF:0000024
(MGI:2159729|PMID:11459928)
UniProt
RGD
PMID:11459928 GO_REF:0000024 MGI:2159729 NCBI chr 6:48,107,575...48,153,762
Ensembl chr 6:48,107,588...48,145,703
JBrowse link
G Slc26a6 solute carrier family 26 member 6 located_in ISO (PMID:11087667)
(MGI:2159729|PMID:11459928), (MGI:3603991|PMID:16141316), (MGI:3621410|PMID:16532010)
RGD PMID:11087667 PMID:11459928 PMID:16141316 PMID:16532010 MGI:2159729 MGI:3603991 MGI:3621410 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778
JBrowse link
G Slc27a4 solute carrier family 27 member 4 located_in ISO (MGI:2682069|PMID:14512415) RGD PMID:14512415 MGI:2682069 NCBI chr 3:13,075,022...13,087,943
Ensembl chr 3:13,075,022...13,087,943
JBrowse link
G Slc28a1 solute carrier family 28 member 1 located_in
part_of
IEA
ISO
GO_REF:0000107
(MGI:6436961|PMID:22492015)
Ensembl
RGD
PMID:22492015 GO_REF:0000107 MGI:6436961 NCBI chr 1:135,079,375...135,122,791
Ensembl chr 1:135,081,385...135,122,464
JBrowse link
G Slc28a2 solute carrier family 28 member 2 part_of ISO (MGI:6436961|PMID:22492015) RGD PMID:22492015 MGI:6436961 NCBI chr 3:109,324,815...109,387,702
Ensembl chr 3:109,366,996...109,387,702
JBrowse link
G Slc28a3 solute carrier family 28 member 3 located_in
part_of
IEA
ISO
GO_REF:0000107
(MGI:6436961|PMID:22492015)
Ensembl
RGD
PMID:22492015 GO_REF:0000107 MGI:6436961 NCBI chr17:6,062,563...6,112,965
Ensembl chr17:6,062,549...6,114,038
JBrowse link
G Slc2a2 solute carrier family 2 member 2 IDA RGD PMID:17272350 RGD:2308883 NCBI chr 2:111,609,798...111,639,930
Ensembl chr 2:111,611,774...111,639,933
JBrowse link
G Slc34a1 solute carrier family 34 member 1 IDA RGD PMID:19493963 RGD:2311317 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852
JBrowse link
G Slc34a2 solute carrier family 34 member 2 IDA RGD PMID:18586044 RGD:2311312 NCBI chr14:57,910,931...57,930,236
Ensembl chr14:57,910,480...57,930,436
JBrowse link
G Slc34a3 solute carrier family 34 member 3 located_in IDA
IEA
GO_REF:0000002 InterPro
RGD
PMID:16985216 GO_REF:0000002, RGD:2311303 NCBI chr 3:8,044,294...8,050,034
Ensembl chr 3:8,044,296...8,049,970
JBrowse link
G Slc3a1 solute carrier family 3 member 1 located_in ISO (PMID:12167606)
(MGI:5546001|PMID:12167606)
RGD PMID:12167606 MGI:5546001 NCBI chr 6:9,608,169...9,641,881
Ensembl chr 6:9,608,178...9,641,907
JBrowse link
G Slc46a1 solute carrier family 46 member 1 IDA RGD PMID:23287122 RGD:7244264 NCBI chr10:63,361,504...63,367,940
Ensembl chr10:63,361,486...63,368,848
JBrowse link
G Slc5a1 solute carrier family 5 member 1 part_of IDA PMID:14986005 RGD
ARUK-UCL
PMID:17272350 PMID:14986005 RGD:2308883, RGD:1579739 NCBI chr14:77,553,990...77,618,589
Ensembl chr14:77,553,843...77,618,547
JBrowse link
G Slc5a2 solute carrier family 5 member 2 IDA RGD PMID:14506074 RGD:1599050 NCBI chr 1:182,847,185...182,853,309
Ensembl chr 1:182,847,106...182,853,306
JBrowse link
G Slc5a6 solute carrier family 5 member 6 IDA RGD PMID:12620923 RGD:730078 NCBI chr 6:25,319,187...25,331,713
Ensembl chr 6:25,320,442...25,331,712
JBrowse link
G Slc6a14 solute carrier family 6 member 14 IDA RGD PMID:17006743 RGD:1625275 NCBI chr  X:112,314,643...112,375,412
Ensembl chr  X:112,314,691...112,375,096
JBrowse link
G Slc6a18 solute carrier family 6 member 18 located_in IEA
ISO
GO_REF:0000107
(MGI:3696607|PMID:17167413)
Ensembl
RGD
PMID:17167413 GO_REF:0000107 MGI:3696607 NCBI chr 1:29,607,288...29,621,925
Ensembl chr 1:29,608,077...29,621,925
JBrowse link
G Slc6a19 solute carrier family 6 member 19 part_of
located_in
ISO (PMID:25534429)
(MGI:3696607|PMID:17167413), (MGI:3838678|PMID:19185582)
RGD PMID:17167413 PMID:19185582 PMID:25534429 MGI:3696607 MGI:3838678 NCBI chr 1:29,586,205...29,604,960
Ensembl chr 1:29,586,195...29,604,962
JBrowse link
G Slc7a11 solute carrier family 7 member 11 located_in ISO (MGI:3624070|PMID:16399997) RGD PMID:16399997 MGI:3624070 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
JBrowse link
G Slc7a9 solute carrier family 7 member 9 located_in ISO
ISS
(PMID:12167606)
(MGI:5546001|PMID:12167606)
GO_REF:0000024
RGD
UniProt
PMID:12167606 GO_REF:0000024 MGI:5546001 NCBI chr 1:88,109,517...88,132,653
Ensembl chr 1:88,110,644...88,132,641
JBrowse link
G Slc9a3 solute carrier family 9 member A3 is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(MGI:3603991|PMID:16141316)
RGD PMID:16141316 PMID:15238256 PMID:21873635 MGI:3603991, RGD:1581378, RGD:13792537 NCBI chr 1:29,124,633...29,167,912
Ensembl chr 1:29,124,674...29,167,417
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in ISO (MGI:3525780|PMID:15591354) RGD PMID:15591354 MGI:3525780 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Slco1a5 solute carrier organic anion transporter family, member 1A5 IDA RGD PMID:12751626 RGD:2303072 NCBI chr 4:175,172,390...175,254,598
Ensembl chr 4:174,710,004...175,254,573
JBrowse link
G Trpm6 transient receptor potential cation channel, subfamily M, member 6 located_in ISO (MGI:2684523|PMID:14576148) RGD PMID:14576148 MGI:2684523 NCBI chr 1:216,136,407...216,320,523
Ensembl chr 1:216,170,038...216,320,520
JBrowse link
kinociliary basal body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in
is_active_in
ISO
IBA
(MGI:6118860|PMID:29293958)
PMID:21873635
RGD PMID:29293958 PMID:21873635 MGI:6118860, RGD:13792537 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927
JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Mkks MKKS centrosomal shuttling protein located_in
is_active_in
ISO
IBA
(MGI:5424301|PMID:22446187)
PMID:21873635
RGD PMID:22446187 PMID:21873635 MGI:5424301, RGD:13792537 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
kinocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (MGI:6118860|PMID:29293958) RGD PMID:29293958 MGI:6118860 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927
JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO
GO_REF:0000107
(MGI:3577782|PMID:15882574)
Ensembl
RGD
PMID:15882574 GO_REF:0000107 MGI:3577782 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Dcdc2 doublecortin domain containing 2 located_in
is_active_in
IDA
IBA
PMID:25601850
PMID:21873635
UniProt
GO_Central
PMID:25601850 PMID:21873635 RGD:10412291, RGD:13792537 NCBI chr17:39,845,952...40,031,781
Ensembl chr17:39,845,952...40,030,743
JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:4421424|PMID:20137774)
PMID:21873635
RGD PMID:20137774 PMID:21873635 MGI:4421424, RGD:13792537 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (MGI:3773480|PMID:18066062) RGD PMID:18066062 MGI:3773480 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Kncn kinocilin located_in
is_active_in
ISO
IBA
(MGI:3576794|PMID:15855039), (MGI:4881391|PMID:20510926)
PMID:21873635
RGD PMID:15855039 PMID:20510926 PMID:21873635 MGI:3576794 MGI:4881391, RGD:13792537 NCBI chr 5:129,362,483...129,365,964
Ensembl chr 5:129,363,785...129,366,738
JBrowse link
G Rac1 Rac family small GTPase 1 located_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Strc stereocilin located_in
is_active_in
ISO
IBA
(MGI:5430850|PMID:21165971)
PMID:21873635
RGD PMID:21165971 PMID:21873635 MGI:5430850, RGD:13792537 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 located_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
JBrowse link
stereocilia ankle link term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 located_in ISO (MGI:3718182|PMID:17295842)
(MGI:3629345|PMID:16775142), (MGI:4454934|PMID:20502675), (MGI:5565635|PMID:24334608)
RGD PMID:16775142 PMID:17295842 PMID:20502675 PMID:24334608 MGI:3629345 MGI:3718182 MGI:4454934 MGI:5565635 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO (MGI:5565635|PMID:24334608), (MGI:5806014|PMID:27525485) RGD PMID:24334608 PMID:27525485 MGI:5565635 MGI:5806014 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Ush2a usherin part_of
located_in
ISS
ISO
GO_REF:0000024
(MGI:4454934|PMID:20502675), (MGI:5565635|PMID:24334608)
UniProt
RGD
PMID:20502675 PMID:24334608 GO_REF:0000024 MGI:4454934 MGI:5565635 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Whrn whirlin located_in IDA
ISO
ISS
PMID:23055499
(MGI:4454934|PMID:20502675), (MGI:5565635|PMID:24334608)
GO_REF:0000024
RGD
UniProt
PMID:20502675 PMID:24334608 PMID:23055499 GO_REF:0000024 MGI:4454934 MGI:5565635, RGD:13800540 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
stereocilia ankle link complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 part_of ISO (MGI:3714249|PMID:17567809) RGD PMID:17567809 MGI:3714249 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Pdzd7 PDZ domain containing 7 part_of IBA
ISO
PMID:21873635
(MGI:5806014|PMID:27525485)
RGD PMID:27525485 PMID:21873635 MGI:5806014, RGD:13792537 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Ush1c USH1 protein network component harmonin part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush2a usherin part_of ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:3714249|PMID:17567809)
UniProt
Ensembl
RGD
PMID:17567809 GO_REF:0000024 GO_REF:0000107 MGI:3714249 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein part_of ISS
ISO
GO_REF:0000024
(MGI:3714249|PMID:17567809)
UniProt
RGD
PMID:17567809 GO_REF:0000024 MGI:3714249 NCBI chr 7:28,512,214...28,597,429
Ensembl chr 7:28,534,249...28,597,356
JBrowse link
G Whrn whirlin part_of IBA
ISO
IEA
ISS
PMID:21873635
(MGI:3714249|PMID:17567809)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17567809 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3714249, RGD:13792537 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
stereocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy6 adenylate cyclase 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 is_active_in IDA
ISO
(MGI:5766107|PMID:26754646) RGD PMID:26754646 PMID:16301216 MGI:5766107, RGD:8548636 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 located_in ISO (MGI:3849653|PMID:19478059) RGD PMID:19478059 MGI:3849653 NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in ISO (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Calb1 calbindin 1 IDA RGD PMID:16120789 RGD:7175527 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Calb2 calbindin 2 IDA RGD PMID:16120789 RGD:7175527 NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438
JBrowse link
G Cdh23 cadherin-related 23 located_in ISO (MGI:2447265|PMID:12485990), (MGI:3577782|PMID:15882574), (MGI:3616414|PMID:16481439), (MGI:3686545|PMID:17050716) RGD PMID:12485990 PMID:15882574 PMID:16481439 PMID:17050716 MGI:2447265 MGI:3577782 MGI:3616414 MGI:3686545 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISO
ISS
(PMID:26173970), (PMID:26426422)
(MGI:5487486|PMID:23023331)
GO_REF:0000024
RGD
UniProt
PMID:23023331 PMID:26173970 PMID:26426422 GO_REF:0000024 MGI:5487486 NCBI chr 8:54,930,265...54,947,157 JBrowse link
G Clic5 chloride intracellular channel 5 located_in ISO (MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:3663248 NCBI chr 9:16,710,980...16,813,427
Ensembl chr 9:16,710,980...16,813,427
JBrowse link
G Clrn1 clarin 1 located_in IEA
ISO
GO_REF:0000107
(MGI:4353969|PMID:19539019)
Ensembl
RGD
PMID:19539019 GO_REF:0000107 MGI:4353969 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO (MGI:3640027|PMID:16464467) RGD PMID:16464467 MGI:3640027 NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855
JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISS
ISO
GO_REF:0000024
(MGI:5000171|PMID:21236676), (MGI:5607381|PMID:24741995)
UniProt
RGD
PMID:21236676 PMID:24741995 GO_REF:0000024 MGI:5000171 MGI:5607381 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Espn espin located_in ISO (PMID:29572253)
(MGI:4881391|PMID:20510926)
RGD PMID:20510926 PMID:29572253 MGI:4881391 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal located_in ISO (MGI:4820459|PMID:20660251) RGD PMID:20660251 MGI:4820459 NCBI chr10:105,634,783...105,641,322
Ensembl chr10:105,634,783...105,641,322
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:4421424|PMID:20137774), (MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:20137774 PMID:30380417 PMID:21873635 MGI:4421424 MGI:6278501, RGD:13792537 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Loxhd1 lipoxygenase homology PLAT domains 1 located_in ISO (MGI:4367644|PMID:19732867) RGD PMID:19732867 MGI:4367644 NCBI chr18:70,818,276...70,969,983
Ensembl chr18:70,818,276...70,969,983
JBrowse link
G Myo15a myosin XVA located_in ISO (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340
JBrowse link
G Myo1c myosin 1C located_in ISO (MGI:3686545|PMID:17050716) RGD PMID:17050716 MGI:3686545 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Myo7a myosin VIIA is_active_in
located_in
ISO (MGI:5766107|PMID:26754646)
(MGI:2447265|PMID:12485990), (MGI:3616414|PMID:16481439), (MGI:4430014|PMID:20016102), (MGI:5806014|PMID:27525485)
RGD PMID:12485990 PMID:16481439 PMID:20016102 PMID:26754646 PMID:27525485 MGI:2447265 MGI:3616414 MGI:4430014 MGI:5766107 MGI:5806014 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Ocm oncomodulin IDA RGD PMID:16120789 RGD:7175527 NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pcdh15 protocadherin related 15 located_in
is_active_in
ISO (MGI:3722521|PMID:14570705)
(MGI:5766107|PMID:26754646)
RGD PMID:14570705 PMID:26754646 MGI:3722521 MGI:5766107 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO (MGI:5806014|PMID:27525485), (MGI:6376373|PMID:31448880) RGD PMID:27525485 PMID:31448880 MGI:5806014 MGI:6376373 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pls1 plastin 1 located_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Pls3 plastin 3 IDA RGD PMID:12378542 RGD:731234 NCBI chr  X:111,589,193...111,683,908
Ensembl chr  X:111,589,254...111,683,891
JBrowse link
G Prom1 prominin 1 located_in ISO (MGI:3051924|PMID:15316084) RGD PMID:15316084 MGI:3051924 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Pvalb parvalbumin IDA RGD PMID:16120789 RGD:7175527 NCBI chr 7:109,772,939...109,787,954
Ensembl chr 7:109,772,593...109,784,561
JBrowse link
G Rdx radixin located_in ISO (MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:3663248 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Rhoc ras homolog family member C located_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA
ISO
PMID:24958875
(MGI:5789047|PMID:27269051)
RGD PMID:27269051 PMID:24958875 MGI:5789047, RGD:10047244 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Slc4a7 solute carrier family 4 member 7 IDA RGD PMID:16301216 RGD:8548636 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Slc9a3r2 SLC9A3 regulator 2 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:13,662,461...13,672,975
Ensembl chr10:13,662,461...13,673,049
JBrowse link
G Tprn taperin located_in ISS
ISO
GO_REF:0000024
(MGI:4440409|PMID:20170899), (MGI:5789047|PMID:27269051)
UniProt
RGD
PMID:20170899 PMID:27269051 GO_REF:0000024 MGI:4440409 MGI:5789047 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats located_in ISO (MGI:5430693|PMID:22678063) RGD PMID:22678063 MGI:5430693 NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914
JBrowse link
G Twf2 twinfilin actin-binding protein 2 located_in ISO (MGI:5285166|PMID:19955359) RGD PMID:19955359 MGI:5285166 NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
JBrowse link
G Ush1c USH1 protein network component harmonin located_in
is_active_in
IDA
ISO
(MGI:2447265|PMID:12485990), (MGI:4430014|PMID:20016102)
(MGI:5766107|PMID:26754646)
RGD PMID:12485990 PMID:20016102 PMID:26754646 PMID:16301216 MGI:2447265 MGI:4430014 MGI:5766107, RGD:8548636 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush2a usherin NOT|located_in IDA
ISO
hair cell
(MGI:5430895|PMID:16301217)
RGD PMID:16301217 PMID:16301216 MGI:5430895, RGD:8548636 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Whrn whirlin located_in IDA
ISO
ISS
(MGI:3528095|PMID:15590699), (MGI:3528099|PMID:15590698), (MGI:3606745|PMID:15654330)
GO_REF:0000024
RGD
UniProt
PMID:15590698 PMID:15590699 PMID:15654330 PMID:16434480 GO_REF:0000024 MGI:3528095 MGI:3528099 MGI:3606745, RGD:1600128 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 located_in ISO (MGI:5755785|PMID:25105228) RGD PMID:25105228 MGI:5755785 NCBI chr 2:39,211,131...39,378,877
Ensembl chr 2:39,212,949...39,378,924
JBrowse link
stereocilium base term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 located_in
is_active_in
ISO
IBA
(MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:30380417 PMID:21873635 MGI:6278501, RGD:13792537 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Myo7a myosin VIIA located_in ISO (MGI:3714249|PMID:17567809) RGD PMID:17567809 MGI:3714249 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Pjvk pejvakin located_in ISO (MGI:5887150|PMID:28209736) RGD PMID:28209736 MGI:5887150 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
JBrowse link
G Tprn taperin located_in
is_active_in
ISO
IBA
(MGI:5887150|PMID:28209736), (MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:28209736 PMID:30380417 PMID:21873635 MGI:5887150 MGI:6278501, RGD:13792537 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (MGI:5887150|PMID:28209736)
(MGI:4881391|PMID:20510926)
RGD PMID:20510926 PMID:28209736 MGI:4881391 MGI:5887150 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
stereocilium bundle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clic5 chloride intracellular channel 5 located_in IDA PMID:17021174 MGI PMID:17021174 RGD:8554297 NCBI chr 9:16,710,980...16,813,427
Ensembl chr 9:16,710,980...16,813,427
JBrowse link
G Clrn2 clarin 2 located_in ISO (MGI:6376373|PMID:31448880) RGD PMID:31448880 MGI:6376373 NCBI chr14:65,656,550...65,666,193
Ensembl chr14:65,656,550...65,666,193
JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO (MGI:3640027|PMID:16464467) RGD PMID:16464467 MGI:3640027 NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Eps8l2 EPS8-like 2 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 1:196,446,067...196,471,542
Ensembl chr 1:196,446,287...196,471,541
JBrowse link
G Espn espin located_in ISO (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 located_in ISO (MGI:4454534|PMID:19741271) RGD PMID:19741271 MGI:4454534 NCBI chr16:67,430,684...67,442,459
Ensembl chr16:67,430,578...67,442,730
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (MGI:3759710|PMID:17876667) RGD PMID:17876667 MGI:3759710 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Myo15a myosin XVA located_in ISO (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340
JBrowse link
G Myo1c myosin 1C IDA RGD PMID:12486594 RGD:1298992 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Pcdh15 protocadherin related 15 located_in ISO (MGI:4950645|PMID:21427143) RGD PMID:21427143 MGI:4950645 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Ptprq protein tyrosine phosphatase, receptor type, Q located_in IEA
ISO
GO_REF:0000107
(MGI:5315778|PMID:22357859)
Ensembl
RGD
PMID:22357859 GO_REF:0000107 MGI:5315778 NCBI chr 7:42,837,109...43,016,917
Ensembl chr 7:42,837,109...43,016,917
JBrowse link
G Slc9a3r2 SLC9A3 regulator 2 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:13,662,461...13,672,975
Ensembl chr10:13,662,461...13,673,049
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 located_in IEA
ISO
GO_REF:0000107
(MGI:3525035|PMID:15483558), (MGI:3579208|PMID:15843607)
Ensembl
RGD
PMID:15483558 PMID:15843607 GO_REF:0000107 MGI:3525035 MGI:3579208 NCBI chr 5:4,379,999...4,433,243
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
G Ush2a usherin located_in ISO (MGI:3700725|PMID:17360538) RGD PMID:17360538 MGI:3700725 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Whrn whirlin located_in ISO (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
stereocilium coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkhd1l1 PKHD1 like 1 located_in ISO (MGI:6358987|PMID:31444330) RGD PMID:31444330 MGI:6358987 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
JBrowse link
stereocilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B ISO RGD RGD:11556226 RGD:150520179 NCBI chr 3:7,380,892...7,546,104
Ensembl chr 3:7,380,922...7,546,091
JBrowse link
G Myo1c myosin 1C located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA PMID:24958875 MGI PMID:24958875 RGD:10047244 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Ush2a usherin located_in ISO
IEA
(MGI:5430895|PMID:16301217)
GO_REF:0000107
RGD
Ensembl
PMID:16301217 GO_REF:0000107 MGI:5430895 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:28,512,214...28,597,429
Ensembl chr 7:28,534,249...28,597,356
JBrowse link
stereocilium shaft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fchsd2 FCH and double SH3 domains 2 located_in ISO (MGI:6233193|PMID:23437151) RGD PMID:23437151 MGI:6233193 NCBI chr 1:155,444,471...155,685,539
Ensembl chr 1:155,444,460...155,685,539
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 located_in
is_active_in
ISO
IBA
(MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:30380417 PMID:21873635 MGI:6278501, RGD:13792537 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (MGI:6118860|PMID:29293958) RGD PMID:29293958 MGI:6118860 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927
JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO
GO_REF:0000107
(MGI:2447265|PMID:12485990), (MGI:3686545|PMID:17050716), (MGI:5578076|PMID:24920589)
Ensembl
RGD
PMID:12485990 PMID:17050716 PMID:24920589 GO_REF:0000107 MGI:2447265 MGI:3686545 MGI:5578076 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in
is_active_in
IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(MGI:4947458|PMID:21368133)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21368133 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4947458, RGD:13792537 NCBI chr 1:79,514,975...79,524,871
Ensembl chr 1:79,514,975...79,524,871
JBrowse link
G Coro1a coronin 1A is_active_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Eps8l2 EPS8-like 2 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 1:196,446,067...196,471,542
Ensembl chr 1:196,446,287...196,471,541
JBrowse link
G Espn espin located_in
is_active_in
ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
(MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
UniProt
RGD
PMID:22264607 PMID:26754646 GO_REF:0000024 MGI:5315207 MGI:5766107 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Espnl espin-like located_in
is_active_in
ISO (MGI:5805759|PMID:26926603)
(MGI:5766107|PMID:26754646)
RGD PMID:26754646 PMID:26926603 MGI:5766107 MGI:5805759 NCBI chr 9:91,912,049...91,935,292
Ensembl chr 9:91,912,049...91,935,292
JBrowse link
G Homer2 homer scaffold protein 2 located_in ISS
ISO
GO_REF:0000024
(MGI:5688813|PMID:25816005)
UniProt
RGD
PMID:25816005 GO_REF:0000024 MGI:5688813 NCBI chr 1:135,558,977...135,659,780
Ensembl chr 1:135,567,414...135,659,772
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (MGI:5468200|PMID:23217710) RGD PMID:23217710 MGI:5468200 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Morn4 MORN repeat containing 4 located_in
is_active_in
ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
UniProt
RGD
PMID:26754646 GO_REF:0000024 MGI:5766107 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716
JBrowse link
G Myo3a myosin IIIA located_in
is_active_in
ISO (MGI:4849846|PMID:21165622), (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
(MGI:5766107|PMID:26754646)
RGD PMID:21165622 PMID:22264607 PMID:26754646 MGI:4849846 MGI:5315207 MGI:5766107 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB located_in
is_active_in
ISO (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
(MGI:5766107|PMID:26754646)
RGD PMID:22264607 PMID:26754646 MGI:5315207 MGI:5766107 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Pdzd7 PDZ domain containing 7 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in ISO (MGI:6358987|PMID:31444330) RGD PMID:31444330 MGI:6358987 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Strc stereocilin located_in
is_active_in
ISO
IBA
(MGI:3818235|PMID:18849963), (MGI:5430850|PMID:21165971), (MGI:5578076|PMID:24920589), (MGI:6376373|PMID:31448880)
PMID:21873635
RGD PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 PMID:21873635 MGI:3818235 MGI:5430850 MGI:5578076 MGI:6376373, RGD:13792537 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 1:218,275,262...218,445,955
Ensembl chr 1:218,276,417...218,445,955
JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336
JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Whrn whirlin located_in
is_active_in
IDA
IBA
ISO
IEA
PMID:23055499
PMID:21873635
(MGI:5565635|PMID:24334608), (MGI:6376373|PMID:31448880)
GO_REF:0000107
RGD
Ensembl
PMID:24334608 PMID:31448880 PMID:23055499 PMID:21873635 GO_REF:0000107 MGI:5565635 MGI:6376373, RGD:13800540, RGD:13792537 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
upper tip-link density term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo7a myosin VIIA IDA RGD PMID:21709241 RGD:8699498 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Ush1c USH1 protein network component harmonin located_in ISO (MGI:6376373|PMID:31448880) RGD PMID:31448880 MGI:6376373 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19969
    cellular anatomical entity 19686
      cluster of actin-based cell projections 207
        brush border + 143
        stereocilium bundle + 72
paths to the root