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ONTOLOGY REPORT - ANNOTATIONS


Term:actin-based cell projection
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Accession:GO:0098858 term browser browse the term
Definition:A cell projection supported by an assembly of actin filaments, and which lacks microtubules.



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actin-based cell projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo15a myosin XVA is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340
JBrowse link
dendritic filopodium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbn1 drebrin 1 IDA RGD PMID:12878700 RGD:10398728 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Fmr1 FMRP translational regulator 1 is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(MGI:3655188|PMID:16631377), (MGI:3798322|PMID:18539120)
PMID:16098134
RGD PMID:16631377 PMID:18539120 PMID:15028757 PMID:21873635 PMID:16098134 MGI:3655188 MGI:3798322, RGD:1300188, RGD:13792537, RGD:1601176 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:116,884,167...116,937,586
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
JBrowse link
G Map2 microtubule-associated protein 2 located_in IDA PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IDA MMO:0000662 RGD PMID:2462872 RGD:150523773 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
filopodium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:85,098,837...85,179,829
Ensembl chr17:85,098,550...85,179,792
JBrowse link
G Acp3 acid phosphatase 3 located_in IEA
ISO
GO_REF:0000107
(MGI:5284775|PMID:17658863)
Ensembl
RGD
PMID:17658863 GO_REF:0000107 MGI:5284775 NCBI chr 8:104,905,570...104,956,146
Ensembl chr 8:104,905,586...104,954,236
JBrowse link
G Acta1 actin, alpha 1, skeletal muscle located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr19:51,883,713...51,886,725
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Acta2 actin alpha 2, smooth muscle located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
JBrowse link
G Actg2 actin gamma 2, smooth muscle located_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 4:116,021,832...116,046,475
Ensembl chr 4:116,021,832...116,046,465
JBrowse link
G Actn2 actinin alpha 2 located_in ISO (PMID:12356918) RGD PMID:12356918 NCBI chr17:58,143,334...58,210,622
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
JBrowse link
G Cd302 CD302 molecule located_in ISO
IEA
(PMID:17947679)
GO_REF:0000107
RGD
Ensembl
PMID:17947679 GO_REF:0000107 NCBI chr 3:44,722,324...44,756,045
Ensembl chr 3:44,722,325...44,756,045
JBrowse link
G Cdc42 cell division cycle 42 located_in ISO (PMID:11035016) RGD PMID:11035016 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cdk5 cyclin-dependent kinase 5 located_in ISO (MGI:2446382|PMID:12496365) RGD PMID:12496365 MGI:2446382 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cfl1 cofilin 1 IDA RGD PMID:24515839 RGD:11570532 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Crp C-reactive protein IDA RGD PMID:22090504 RGD:6904210 NCBI chr13:85,131,635...85,175,179
Ensembl chr13:85,124,977...85,175,178
JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule located_in ISS
ISO
GO_REF:0000024
(MGI:5294315|PMID:10814828)
UniProt
RGD
PMID:10814828 GO_REF:0000024 MGI:5294315 NCBI chr11:16,982,752...17,030,078
Ensembl chr11:16,982,860...17,030,046
JBrowse link
G Dag1 dystroglycan 1 located_in ISO (PMID:18341635) RGD PMID:18341635 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Dbn1 drebrin 1 IDA RGD PMID:19222710 RGD:10395284 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dmd dystrophin located_in ISO (PMID:16803572) RGD PMID:16803572 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Dnali1 dynein, axonemal, light intermediate chain 1 located_in
is_active_in
ISO
IBA
(MGI:3628860|PMID:16496424)
PMID:21873635
RGD PMID:16496424 PMID:21873635 MGI:3628860, RGD:13792537 NCBI chr 5:137,318,475...137,327,313
Ensembl chr 5:137,318,477...137,327,336
JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 located_in IEA
ISO
GO_REF:0000107
(MGI:3628860|PMID:16496424)
Ensembl
RGD
PMID:16496424 GO_REF:0000107 MGI:3628860 NCBI chr 6:129,615,208...129,680,888
Ensembl chr 6:129,609,397...129,680,883
JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 located_in ISO (MGI:5906938|PMID:28379358) RGD PMID:28379358 MGI:5906938 NCBI chr 3:13,306,039...13,322,121
Ensembl chr 3:13,306,039...13,322,121
JBrowse link
G Enah ENAH, actin regulator located_in ISO (MGI:1331576|PMID:10069337), (MGI:3046012|PMID:15148305) RGD PMID:10069337 PMID:15148305 MGI:1331576 MGI:3046012 NCBI chr13:93,617,751...93,738,119
Ensembl chr13:93,626,944...93,740,955
JBrowse link
G Epha4 Eph receptor A4 IDA RGD PMID:19086003 RGD:5688744 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
G Ermn ermin located_in
is_active_in
ISO
IBA
(MGI:3612229|PMID:16421295)
PMID:21873635
RGD PMID:16421295 PMID:21873635 MGI:3612229, RGD:13792537 NCBI chr 3:42,628,160...42,633,816
Ensembl chr 3:42,626,309...42,633,744
JBrowse link
G Ezr ezrin is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(PMID:12082081), (PMID:23106337)
RGD PMID:12082081 PMID:23106337 PMID:21753079 PMID:21873635 RGD:7207797, RGD:13792537 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:98,124,304...98,363,299
Ensembl chr15:98,182,329...98,363,299
JBrowse link
G Fat1 FAT atypical cadherin 1 located_in ISO (MGI:3046012|PMID:15148305) RGD PMID:15148305 MGI:3046012 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link
G Fgd4 FYVE, RhoGEF and PH domain containing 4 located_in IEA
ISO
GO_REF:0000107
(MGI:2179874|PMID:11527409)
Ensembl
RGD
PMID:11527409 GO_REF:0000107 MGI:2179874 NCBI chr11:84,399,885...84,551,013
Ensembl chr11:84,399,816...84,546,972
JBrowse link
G Fgf13 fibroblast growth factor 13 located_in IEA
ISO
ISS
GO_REF:0000044
(MGI:5431268|PMID:22726441)
GO_REF:0000024
UniProt
RGD
PMID:22726441 GO_REF:0000024 GO_REF:0000044 MGI:5431268 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391
JBrowse link
G Fscn1 fascin actin-bundling protein 1 is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(MGI:3051184|PMID:15294161), (MGI:3766664|PMID:17671164), (MGI:5603691|PMID:24720729)
(PMID:20137952), (PMID:3525578)
RGD PMID:3525578 PMID:15294161 PMID:17671164 PMID:20137952 PMID:24720729 More... MGI:3051184 MGI:3766664 MGI:5603691, RGD:2317774, RGD:13792537 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Fscn3 fascin actin-bundling protein 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:57,042,797...57,052,224
Ensembl chr 4:57,042,797...57,052,404
JBrowse link
G Gpm6a glycoprotein m6a located_in
is_active_in
IDA
IBA
PMID:16286650
PMID:21873635
UniProt
GO_Central
PMID:16286650 PMID:21873635 RGD:8554337, RGD:13792537 NCBI chr16:36,641,282...36,973,477
Ensembl chr16:36,641,284...36,973,475
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500
JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 located_in ISO (PMID:12515716) RGD PMID:12515716 NCBI chr 2:26,894,836...27,170,270
Ensembl chr 2:26,894,825...27,170,279
JBrowse link
G Itga6 integrin subunit alpha 6 IDA RGD PMID:13130099 RGD:1302259 NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428
JBrowse link
G Itgb1 integrin subunit beta 1 located_in ISO
IEA
(PMID:16803572)
GO_REF:0000107
RGD
Ensembl
PMID:16803572 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Kcnn3 potassium calcium-activated channel subfamily N member 3 IDA RGD PMID:17459146 RGD:7175515 NCBI chr 2:174,929,846...175,088,910
Ensembl chr 2:174,936,629...175,081,145
JBrowse link
G Kitlg KIT ligand located_in IEA
ISS
ISO
GO_REF:0000044
GO_REF:0000024
(PMID:26522471)
UniProt
RGD
PMID:26522471 GO_REF:0000024 GO_REF:0000044 NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 located_in ISO (PMID:16636079) RGD PMID:16636079 NCBI chr15:50,443,300...50,544,682
Ensembl chr15:50,488,149...50,544,680
JBrowse link
G Lrrc7 leucine rich repeat containing 7 IDA RGD PMID:18248607 RGD:2314403 NCBI chr 2:247,147,752...247,533,332
Ensembl chr 2:247,147,752...247,634,547
JBrowse link
G Msn moesin located_in
is_active_in
ISO
IBA
IEA
(PMID:12082081), (PMID:24065547)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:12082081 PMID:24065547 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Mtm1 myotubularin 1 located_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(PMID:12118066)
UniProt
RGD
PMID:12118066 GO_REF:0000024 GO_REF:0000044 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G Myo10 myosin X located_in ISO (MGI:3614365|PMID:16371656) RGD PMID:16371656 MGI:3614365 NCBI chr 2:76,100,962...76,304,164
Ensembl chr 2:76,100,987...76,303,030
JBrowse link
G Myo1b myosin Ib located_in IDA PMID:20610386 UniProt PMID:20610386 RGD:8554686 NCBI chr 9:49,690,043...49,852,373
Ensembl chr 9:49,690,086...49,850,798
JBrowse link
G Myo1g myosin IG located_in ISO (MGI:5566942|PMID:24310084) RGD PMID:24310084 MGI:5566942 NCBI chr14:81,386,701...81,401,843
Ensembl chr14:81,386,701...81,401,843
JBrowse link
G Myo3a myosin IIIA located_in ISO (PMID:17021180) RGD PMID:17021180 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo6 myosin VI located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor located_in IEA
ISO
GO_REF:0000107
(MGI:1202233|PMID:9563848)
Ensembl
RGD
PMID:9563848 GO_REF:0000107 MGI:1202233 NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
JBrowse link
G Palld palladin, cytoskeletal associated protein IDA RGD PMID:12932445 RGD:2325786 NCBI chr16:28,228,006...28,621,349 JBrowse link
G Palm paralemmin located_in ISO (MGI:5009384|PMID:18287537) RGD PMID:18287537 MGI:5009384 NCBI chr 7:9,886,634...9,912,389
Ensembl chr 7:9,886,643...9,912,555
JBrowse link
G Pdpn podoplanin located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:1351508|PMID:10574709)
UniProt
RGD
PMID:10574709 PMID:21873635 GO_REF:0000024 MGI:1351508, RGD:13792537 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Podxl podocalyxin-like located_in ISO
ISS
IEA
(PMID:18456258)
GO_REF:0000024
GO_REF:0000044
RGD
UniProt
PMID:18456258 GO_REF:0000024 GO_REF:0000044 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A located_in IDA
ISO
(MGI:3583726|PMID:15996550) RGD PMID:15996550 PMID:16899074 PMID:15473970 MGI:3583726, RGD:10002752, RGD:10043779 NCBI chr 4:32,970,501...33,292,360
Ensembl chr 4:33,024,450...33,286,907
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B located_in ISO
ISS
(PMID:19151759)
(MGI:3583726|PMID:15996550)
GO_REF:0000024
RGD
UniProt
PMID:15996550 PMID:19151759 GO_REF:0000024 MGI:3583726 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IDA RGD PMID:9660874 RGD:9589123 NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 located_in IEA
IDA
ISO
GO_REF:0000107
PMID:21047789
(PMID:21047789)
Ensembl
RGD
PMID:21047789 PMID:21047789 GO_REF:0000107, RGD:10054076 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Rdx radixin located_in
is_active_in
ISO
IBA
(MGI:1202233|PMID:9563848), (MGI:5645204|PMID:21047789)
PMID:21873635
RGD PMID:9563848 PMID:21047789 PMID:21873635 MGI:1202233 MGI:5645204, RGD:13792537 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in ISS
ISO
GO_REF:0000024
(PMID:17150207)
UniProt
RGD
PMID:17150207 GO_REF:0000024 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Rufy3 RUN and FYVE domain containing 3 located_in IDA PMID:17439943 HGNC-UCL PMID:17439943 RGD:8554472 NCBI chr14:19,431,530...19,506,531
Ensembl chr14:19,432,524...19,507,004
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein colocalizes_with ISO (MGI:5913054|PMID:28098138) RGD PMID:28098138 MGI:5913054 NCBI chr10:55,507,593...55,528,288
Ensembl chr10:55,507,519...55,528,171
JBrowse link
G Shtn1 shootin 1 located_in IDA
IEA
PMID:23453953
PMID:18519736
GO_REF:0000044
UniProt PMID:23453953 PMID:18519736 GO_REF:0000044, RGD:10054078, RGD:10054086 NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Snap25 synaptosome associated protein 25 IDA RGD PMID:10625663 RGD:1299445 NCBI chr 3:124,041,898...124,123,761
Ensembl chr 3:124,041,898...124,123,760
JBrowse link
G Spata13 spermatogenesis associated 13 located_in ISO (PMID:17599059) RGD PMID:17599059 NCBI chr15:34,778,479...34,907,645
Ensembl chr15:34,778,473...34,905,114
JBrowse link
G Spef1 sperm flagellar 1 located_in ISO (PMID:31473225) RGD PMID:31473225 NCBI chr 3:118,390,659...118,396,842
Ensembl chr 3:118,390,575...118,394,531
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 IDA RGD PMID:10625663 RGD:1299445 NCBI chr10:82,511,101...82,568,706
Ensembl chr10:82,504,393...82,571,040
JBrowse link
G Tenm2 teneurin transmembrane protein 2 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:20,480,662...21,706,415
Ensembl chr10:20,481,854...21,705,597
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 located_in IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
JBrowse link
G Tubb3 tubulin, beta 3 class III located_in ISS
ISO
GO_REF:0000024
(MGI:5906064|PMID:28483977)
UniProt
RGD
PMID:28483977 GO_REF:0000024 MGI:5906064 NCBI chr19:51,457,187...51,466,243
Ensembl chr19:51,457,184...51,466,243
JBrowse link
G Twf1 twinfilin actin-binding protein 1 located_in ISO (MGI:2673741|PMID:12807912) RGD PMID:12807912 MGI:2673741 NCBI chr 7:125,715,938...125,727,834
Ensembl chr 7:125,716,015...125,727,894
JBrowse link
G Twf2 twinfilin actin-binding protein 2 located_in ISO (MGI:2673741|PMID:12807912) RGD PMID:12807912 MGI:2673741 NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
JBrowse link
G Unc5c unc-5 netrin receptor C located_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5906064|PMID:28483977)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:28483977 GO_REF:0000024 GO_REF:0000107 MGI:5906064 NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
JBrowse link
G Utrn utrophin located_in ISO (PMID:16803572) RGD PMID:16803572 NCBI chr 1:6,720,854...7,224,313
Ensembl chr 1:6,722,594...7,224,313
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 IDA MMO:0000538 RGD PMID:19745841 RGD:8554110 NCBI chr12:16,728,477...16,764,261
Ensembl chr12:16,728,524...16,764,097
JBrowse link
G Vasp vasodilator-stimulated phosphoprotein located_in ISO (MGI:3046012|PMID:15148305), (MGI:3051184|PMID:15294161) RGD PMID:15148305 PMID:15294161 MGI:3046012 MGI:3051184 NCBI chr 1:78,910,009...78,925,791
Ensembl chr 1:78,910,011...78,925,061
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 located_in ISO (PMID:12082081) RGD PMID:12082081 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
G Vil1 villin 1 located_in ISO (PMID:15342783)
(MGI:4943407|PMID:16008578)
RGD PMID:15342783 PMID:16008578 MGI:4943407 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link
filopodium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 IDA RGD PMID:12177200 RGD:2313249 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
JBrowse link
G Antxr1 ANTXR cell adhesion molecule 1 located_in ISO
IEA
(PMID:16762926)
GO_REF:0000107
RGD
Ensembl
PMID:16762926 GO_REF:0000107 NCBI chr 4:119,590,770...119,778,232
Ensembl chr 4:119,590,771...119,778,232
JBrowse link
G Arf6 ADP-ribosylation factor 6 located_in ISO (PMID:14978216) RGD PMID:14978216 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Dmd dystrophin located_in ISO (PMID:16803572) RGD PMID:16803572 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Fzd9 frizzled class receptor 9 located_in ISO (MGI:1309796|PMID:10198163) RGD PMID:10198163 MGI:1309796 NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398
JBrowse link
G Gap43 growth associated protein 43 located_in ISO (PMID:14978216) RGD PMID:14978216 NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
JBrowse link
G Itga3 integrin subunit alpha 3 located_in ISO (PMID:10455171) RGD PMID:10455171 NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118
JBrowse link
G Itgav integrin subunit alpha V located_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr 3:68,838,524...68,926,653
Ensembl chr 3:68,838,189...68,926,639
JBrowse link
G Itgb3 integrin subunit beta 3 located_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Msn moesin IDA RGD PMID:10945828 RGD:727296 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Myo10 myosin X located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:76,100,962...76,304,164
Ensembl chr 2:76,100,987...76,303,030
JBrowse link
G Ninj1 ninjurin 1 part_of ISO (MGI:6694382|PMID:24917672) RGD PMID:24917672 MGI:6694382 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
JBrowse link
G Palm paralemmin located_in ISO (PMID:14978216) RGD PMID:14978216 NCBI chr 7:9,886,634...9,912,389
Ensembl chr 7:9,886,643...9,912,555
JBrowse link
G Pdpn podoplanin located_in ISO
ISS
(PMID:17046996)
GO_REF:0000024
RGD
UniProt
PMID:17046996 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 located_in ISO (PMID:15671068) RGD PMID:15671068 NCBI chr 6:94,537,088...94,848,085 JBrowse link
G Tbc1d10c TBC1 domain family, member 10C located_in ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:201,476,258...201,484,876
Ensembl chr 1:201,477,157...201,564,920
JBrowse link
G Ttyh1 tweety family member 1 located_in ISO (MGI:3702737|PMID:17116230) RGD PMID:17116230 MGI:3702737 NCBI chr 1:70,053,312...70,071,872
Ensembl chr 1:70,053,324...70,071,845
JBrowse link
G Utrn utrophin located_in ISO
IEA
(PMID:16803572)
GO_REF:0000107
RGD
Ensembl
PMID:16803572 GO_REF:0000107 NCBI chr 1:6,720,854...7,224,313
Ensembl chr 1:6,722,594...7,224,313
JBrowse link
filopodium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 located_in ISO
IEA
(PMID:11516653)
GO_REF:0000107
RGD
Ensembl
PMID:11516653 GO_REF:0000107 NCBI chr17:85,098,837...85,179,829
Ensembl chr17:85,098,550...85,179,792
JBrowse link
G Abi2 abl-interactor 2 located_in ISO (PMID:11516653) RGD PMID:11516653 NCBI chr 9:61,856,379...61,904,029
Ensembl chr 9:61,827,139...61,905,699
JBrowse link
G Abitram actin binding transcription modulator located_in
is_active_in
ISO
IBA
(MGI:5632379|PMID:24782708)
PMID:21873635
RGD PMID:24782708 PMID:21873635 MGI:5632379, RGD:13792537 NCBI chr 5:71,505,853...71,524,224
Ensembl chr 5:71,505,813...71,511,890
JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 located_in ISO (MGI:5529726|PMID:24305805) RGD PMID:24305805 MGI:5529726 NCBI chr 1:95,384,303...95,414,249
Ensembl chr 1:95,384,309...95,414,147
JBrowse link
G Cib1 calcium and integrin binding 1 located_in ISO
ISS
(PMID:20951827)
GO_REF:0000024
RGD
UniProt
PMID:20951827 GO_REF:0000024 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 IDA RGD PMID:16260607 RGD:11557987 NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
JBrowse link
G Ephb1 Eph receptor B1 located_in ISO (MGI:5529726|PMID:24305805) RGD PMID:24305805 MGI:5529726 NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
JBrowse link
G Fmr1 FMRP translational regulator 1 located_in IEA
ISO
ISS
GO_REF:0000044
(MGI:3655188|PMID:16631377)
GO_REF:0000024
UniProt
RGD
PMID:16631377 GO_REF:0000024 GO_REF:0000044 MGI:3655188 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Fzd3 frizzled class receptor 3 located_in ISO (MGI:5529726|PMID:24305805) RGD PMID:24305805 MGI:5529726 NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
JBrowse link
G Morn4 MORN repeat containing 4 located_in ISO
ISS
(PMID:25822849)
GO_REF:0000024
RGD
UniProt
PMID:25822849 GO_REF:0000024 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716
JBrowse link
G Myo10 myosin X located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:76,100,962...76,304,164
Ensembl chr 2:76,100,987...76,303,030
JBrowse link
G Myo3a myosin IIIA located_in ISO (PMID:25822849)
(MGI:5315207|PMID:22264607)
RGD PMID:22264607 PMID:25822849 MGI:5315207 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB located_in ISO PR:Q9ET47 (MGI:5315207|PMID:22264607) RGD PMID:22264607 MGI:5315207 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Myo5a myosin VA located_in ISO (PMID:24006491) RGD PMID:24006491 NCBI chr 8:75,811,985...75,980,049
Ensembl chr 8:75,812,412...75,975,918
JBrowse link
G Myo9b myosin IXb located_in ISO (MGI:3720403|PMID:17314409) RGD PMID:17314409 MGI:3720403 NCBI chr16:17,945,379...18,030,114
Ensembl chr16:17,945,448...18,030,126
JBrowse link
G Nlgn1 neuroligin 1 part_of
located_in
IDA PMID:19450252 CACAO
BHF-UCL
PMID:19450252 PMID:19450252 RGD:8553605, RGD:8553605 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Ttyh1 tweety family member 1 located_in ISO (MGI:3702737|PMID:17116230) RGD PMID:17116230 MGI:3702737 NCBI chr 1:70,053,312...70,071,872
Ensembl chr 1:70,053,324...70,071,845
JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K located_in ISO (MGI:5603752|PMID:18511602) RGD PMID:18511602 MGI:5603752 NCBI chr14:42,658,016...42,718,899
Ensembl chr14:42,658,016...42,718,630
JBrowse link
G Vil1 villin 1 located_in ISO (MGI:4943407|PMID:16008578) RGD PMID:16008578 MGI:4943407 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link
growth cone filopodium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1 amyloid beta precursor protein binding family B member 1 IDA RGD PMID:12843239 RGD:10053998 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G App amyloid beta precursor protein IDA RGD PMID:12843239 RGD:10053998 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Fmr1 FMRP translational regulator 1 located_in ISS
ISO
GO_REF:0000024
(MGI:3655188|PMID:16631377)
UniProt
RGD
PMID:16631377 GO_REF:0000024 MGI:3655188 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Itga3 integrin subunit alpha 3 IDA MMO:0000662 RGD PMID:7544141 RGD:13593531 NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118
JBrowse link
microvillus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07036550.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:42,247,138...42,323,730 JBrowse link
G Angpt1 angiopoietin 1 located_in IEA
ISO
GO_REF:0000107
(PMID:19424712)
Ensembl
RGD
PMID:19424712 GO_REF:0000107 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
JBrowse link
G Anks4b ankyrin repeat and sterile alpha motif domain containing 4B located_in ISO (PMID:26812018)
(MGI:5763318|PMID:26812018)
RGD PMID:26812018 MGI:5763318 NCBI chr 1:174,534,195...174,557,798
Ensembl chr 1:174,547,473...174,557,797
JBrowse link
G Aoc3 amine oxidase, copper containing 3 located_in ISO (PMID:23349812) RGD PMID:23349812 NCBI chr10:86,272,757...86,280,702 JBrowse link
G Aqp5 aquaporin 5 located_in ISO (MGI:2154040|PMID:11707570) RGD PMID:11707570 MGI:2154040 NCBI chr 7:130,722,675...130,726,207
Ensembl chr 7:130,721,748...130,726,209
JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A located_in ISO (MGI:4943380|PMID:18667600) RGD PMID:18667600 MGI:4943380 NCBI chr11:56,561,444...56,614,694
Ensembl chr11:56,560,974...56,614,694
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 located_in ISS
ISO
GO_REF:0000024
(MGI:3760063|PMID:17392376), (MGI:4943380|PMID:18667600)
UniProt
RGD
PMID:17392376 PMID:18667600 GO_REF:0000024 MGI:3760063 MGI:4943380 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 located_in ISO (MGI:4943380|PMID:18667600), (MGI:4943394|PMID:17898041) RGD PMID:17898041 PMID:18667600 MGI:4943380 MGI:4943394 NCBI chr16:20,617,515...20,641,651
Ensembl chr16:20,617,518...20,641,745
JBrowse link
G Atp6v1e1 ATPase H+ transporting V1 subunit E1 located_in IEA
ISO
GO_REF:0000107
(MGI:4943380|PMID:18667600)
Ensembl
RGD
PMID:18667600 GO_REF:0000107 MGI:4943380 NCBI chr 4:154,022,360...154,044,486
Ensembl chr 4:154,022,358...154,044,584
JBrowse link
G Atp7a ATPase copper transporting alpha IDA RGD PMID:24614235 RGD:11341682 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in ISO (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bpifa1 BPI fold containing family A, member 1 IDA RGD PMID:11821380 RGD:625372 NCBI chr 3:142,627,810...142,633,553
Ensembl chr 3:142,627,810...142,633,552
JBrowse link
G Car2 carbonic anhydrase 2 IDA RGD PMID:16575514 RGD:1600701 NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
JBrowse link
G Cblif cobalamin binding intrinsic factor located_in ISO
IEA
(PMID:8886952)
GO_REF:0000107
RGD
Ensembl
PMID:8886952 GO_REF:0000107 NCBI chr 1:208,605,983...208,620,231
Ensembl chr 1:208,605,983...208,620,344
JBrowse link
G Cbr1 carbonyl reductase 1 IDA RGD PMID:16457595 RGD:2316271 NCBI chr11:32,860,618...32,862,981
Ensembl chr11:32,908,950...32,911,393
JBrowse link
G Cd302 CD302 molecule located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:44,722,324...44,756,045
Ensembl chr 3:44,722,325...44,756,045
JBrowse link
G Cd44 CD44 molecule (Indian blood group) located_in IEA
ISO
ISS
GO_REF:0000044
(MGI:6115186|PMID:9472040)
GO_REF:0000024
UniProt
RGD
PMID:9472040 GO_REF:0000024 GO_REF:0000044 MGI:6115186 NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
JBrowse link
G Cftr CF transmembrane conductance regulator IDA RGD PMID:16575514 RGD:1600701 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Clca1 chloride channel accessory 1 located_in ISO (MGI:5471906|PMID:23266329) RGD PMID:23266329 MGI:5471906 NCBI chr 2:233,938,677...233,964,369
Ensembl chr 2:233,938,677...233,964,369
JBrowse link
G Clic4 chloride intracellular channel 4 located_in ISO
IEA
(PMID:14569596)
GO_REF:0000107
RGD
Ensembl
PMID:14569596 GO_REF:0000107 NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
JBrowse link
G Clrn1 clarin 1 located_in ISO
IEA
(PMID:19423712)
GO_REF:0000107
RGD
Ensembl
PMID:19423712 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase IDA RGD PMID:16876328 RGD:6483359 NCBI chr10:85,511,164...85,517,723
Ensembl chr10:85,511,160...85,517,720
JBrowse link
G Crb1 crumbs cell polarity complex component 1 located_in IDA
ISO
(MGI:3690408|PMID:16885194) RGD PMID:16885194 PMID:25878282 MGI:3690408, RGD:13451131 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
JBrowse link
G Ctsl cathepsin L IDA RGD PMID:15085256 RGD:2315617 NCBI chr17:764,370...770,533
Ensembl chr17:764,309...770,548
JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase located_in ISO (MGI:2179664|PMID:11882650) RGD PMID:11882650 MGI:2179664 NCBI chr10:106,006,404...106,008,294 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 located_in IDA PMID:19587293 MGI PMID:19587293 RGD:10400858 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 located_in IEA
ISO
GO_REF:0000107
(PMID:12671034)
Ensembl
RGD
PMID:12671034 GO_REF:0000107 NCBI chr10:104,242,223...104,246,589
Ensembl chr10:104,242,223...104,246,589
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IDA RGD PMID:15800203 RGD:1582139 NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
JBrowse link
G Espn espin located_in ISO
IDA
IEA
(PMID:29572253)
PMID:16413524
GO_REF:0000107
RGD
Ensembl
PMID:29572253 PMID:16413524 GO_REF:0000107, RGD:8554030 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Exoc4 exocyst complex component 4 located_in IEA
ISO
GO_REF:0000107
(MGI:4352761|PMID:19587293)
Ensembl
RGD
PMID:19587293 GO_REF:0000107 MGI:4352761 NCBI chr 4:61,807,706...62,584,316
Ensembl chr 4:61,807,761...62,585,723
JBrowse link
G Ezr ezrin located_in
is_active_in
ISO
IBA
(PMID:12082081)
PMID:21873635
(MGI:3695521|PMID:17138661), (MGI:4457791|PMID:20551175), (MGI:5484953|PMID:23284756), (MGI:6115186|PMID:9472040)
RGD PMID:9472040 PMID:12082081 PMID:17138661 PMID:20551175 PMID:23284756 More... MGI:3695521 MGI:4457791 MGI:5484953 MGI:6115186, RGD:13792537 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Fabp2 fatty acid binding protein 2 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 2:211,040,032...211,044,089
Ensembl chr 2:211,040,032...211,044,089
JBrowse link
G Fmn2 formin 2 located_in ISO (MGI:5476853|PMID:23439682) RGD PMID:23439682 MGI:5476853 NCBI chr13:86,454,256...86,771,437 JBrowse link
G Foxa1 forkhead box A1 located_in IEA
ISO
GO_REF:0000107
(MGI:5471906|PMID:23266329)
Ensembl
RGD
PMID:23266329 GO_REF:0000107 MGI:5471906 NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
JBrowse link
G Fscn1 fascin actin-bundling protein 1 is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(PMID:9571235)
RGD PMID:9571235 PMID:18855019 PMID:21873635 RGD:2317768, RGD:13792537 NCBI chr12:11,597,042...11,610,183
Ensembl chr12:11,597,048...11,610,211
JBrowse link
G Fscn3 fascin actin-bundling protein 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:57,042,797...57,052,224
Ensembl chr 4:57,042,797...57,052,404
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 located_in
is_active_in
ISO
IBA
(MGI:5635346|PMID:24619944)
(PMID:24619944)
PMID:21873635
RGD PMID:24619944 PMID:21873635 MGI:5635346, RGD:13792537 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Hyal2 hyaluronidase 2 located_in ISO
IEA
ISS
(PMID:19366691)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19366691 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850
JBrowse link
G Icam2 intercellular adhesion molecule 2 located_in ISO (MGI:6115186|PMID:9472040) RGD PMID:9472040 MGI:6115186 NCBI chr10:91,308,608...91,319,536
Ensembl chr10:91,308,538...91,315,293
JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 located_in ISO (MGI:3835718|PMID:18604197) RGD PMID:18604197 MGI:3835718 NCBI chr 2:26,894,836...27,170,270
Ensembl chr 2:26,894,825...27,170,279
JBrowse link
G Jam3 junctional adhesion molecule 3 located_in ISO (PMID:19060272) RGD PMID:19060272 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IDA RGD PMID:20466875 RGD:2326033 NCBI chr13:84,802,026...84,835,383
Ensembl chr13:84,802,009...84,835,461
JBrowse link
G Kif13b kinesin family member 13B located_in IDA PMID:19587293 MGI PMID:19587293 RGD:10400858 NCBI chr15:38,908,318...39,062,849
Ensembl chr15:38,924,624...39,084,879
JBrowse link
G Lipc lipase C, hepatic type IDA liver parenchymal cells RGD PMID:9020876 RGD:1600641 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 located_in ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Lyz2 lysozyme 2 IDA RGD PMID:9208328 RGD:1599861 NCBI chr 7:52,906,810...52,912,154
Ensembl chr 7:52,906,811...52,912,106
JBrowse link
G Msn moesin located_in
is_active_in
ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(MGI:6115186|PMID:9472040)
GO_REF:0000107
(PMID:12082081)
UniProt
RGD
Ensembl
PMID:9472040 PMID:12082081 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:6115186, RGD:13792537 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Muc3 mucin 3, intestinal located_in ISO (MGI:5543983|PMID:23784542) RGD PMID:23784542 MGI:5543983 NCBI chr12:19,527,251...19,536,924 JBrowse link
G Myo1a myosin IA located_in
is_active_in
IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(MGI:1329200|PMID:9933937)
GO_REF:0000024
(PMID:9858156)
Ensembl
RGD
UniProt
PMID:9858156 PMID:9933937 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1329200, RGD:13792537 NCBI chr 7:63,542,988...63,557,944
Ensembl chr 7:63,542,988...63,557,944
JBrowse link
G Myo1b myosin Ib is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:49,690,043...49,852,373
Ensembl chr 9:49,690,086...49,850,798
JBrowse link
G Myo1c myosin 1C located_in
is_active_in
ISO
IBA
(PMID:9858156)
PMID:21873635
RGD PMID:9858156 PMID:21873635 RGD:13792537 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Myo1d myosin ID is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:65,489,153...65,765,812
Ensembl chr10:65,489,154...65,766,349
JBrowse link
G Myo1e myosin IE is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:70,887,934...71,080,180
Ensembl chr 8:70,887,870...71,080,169
JBrowse link
G Myo1f myosin IF is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:14,363,340...14,413,911
Ensembl chr 7:14,363,350...14,413,911
JBrowse link
G Myo1g myosin IG located_in
is_active_in
ISO
IBA
(MGI:5566942|PMID:24310084)
PMID:21873635
RGD PMID:24310084 PMID:21873635 MGI:5566942, RGD:13792537 NCBI chr14:81,386,701...81,401,843
Ensembl chr14:81,386,701...81,401,843
JBrowse link
G Myo6 myosin VI is_active_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:18653479 PMID:21873635 RGD:2314961, RGD:13792537 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292
JBrowse link
G Myo7a myosin VIIA located_in
is_active_in
IDA
IBA
PMID:7568224
PMID:21873635
MGI
GO_Central
PMID:7568224 PMID:21873635 PMID:21873635 RGD:8553891, RGD:13792537, RGD:13792537 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Myo7b myosin VIIb located_in
is_active_in
ISO
IBA
(PMID:24725409)
PMID:21873635
(MGI:5578666|PMID:24725409)
RGD PMID:24725409 PMID:21873635 PMID:21873635 MGI:5578666, RGD:13792537, RGD:13792537 NCBI chr18:23,588,307...23,669,841
Ensembl chr18:23,588,307...23,669,809
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase IDA RGD PMID:9227416 RGD:1642067 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Oxtr oxytocin receptor IDA RGD PMID:11456414 RGD:2304235 NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
JBrowse link
G Pdgfa platelet derived growth factor subunit A located_in ISS
ISO
GO_REF:0000024
(MGI:2183884|PMID:12101409)
UniProt
RGD
PMID:12101409 GO_REF:0000024 MGI:2183884 NCBI chr12:15,645,549...15,667,056
Ensembl chr12:15,645,541...15,666,497
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha located_in IEA
ISO
GO_REF:0000107
(MGI:5471906|PMID:23266329)
Ensembl
RGD
PMID:23266329 GO_REF:0000107 MGI:5471906 NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
JBrowse link
G Podxl podocalyxin-like located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
JBrowse link
G Prom1 prominin 1 located_in
is_active_in
ISO
IBA
(MGI:1099557|PMID:9356465), (MGI:3584059|PMID:15976444)
PMID:21873635
RGD PMID:9356465 PMID:15976444 PMID:21873635 MGI:1099557 MGI:3584059, RGD:13792537 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Prom2 prominin 2 located_in
is_active_in
IDA
IBA
PMID:17109118
PMID:21873635
UniProt
GO_Central
PMID:17109118 PMID:21873635 RGD:8554554, RGD:13792537 NCBI chr 3:114,747,654...114,761,787
Ensembl chr 3:114,747,654...114,761,787
JBrowse link
G Ptprh protein tyrosine phosphatase, receptor type, H located_in ISO (MGI:3838699|PMID:19170756), (MGI:5695712|PMID:26195794) RGD PMID:19170756 PMID:26195794 MGI:3838699 MGI:5695712 NCBI chr 1:69,243,704...69,276,294
Ensembl chr 1:69,242,321...69,285,077
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 located_in IDA
IEA
ISO
PMID:21047789
GO_REF:0000107
(PMID:21047789)
Ensembl
RGD
PMID:21047789 PMID:21047789 GO_REF:0000107, RGD:10054076 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Rdx radixin is_active_in
located_in
IDA
IBA
ISO
PMID:21873635
(MGI:2181857|PMID:12068294), (MGI:3039970|PMID:15093731), (MGI:5645204|PMID:21047789), (MGI:6115186|PMID:9472040)
RGD PMID:9472040 PMID:12068294 PMID:15093731 PMID:21047789 PMID:11438984 More... MGI:2181857 MGI:3039970 MGI:5645204 MGI:6115186, RGD:2316843, RGD:13792537 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Slc10a2 solute carrier family 10 member 2 located_in IEA
ISO
GO_REF:0000107
(MGI:5499673|PMID:23200860)
Ensembl
RGD
PMID:23200860 GO_REF:0000107 MGI:5499673 NCBI chr16:84,386,528...84,409,475
Ensembl chr16:84,374,862...84,409,475
JBrowse link
G Slc27a4 solute carrier family 27 member 4 located_in
is_active_in
ISO
IBA
(MGI:1345773|PMID:10518211)
PMID:21873635
RGD PMID:10518211 PMID:21873635 MGI:1345773, RGD:13792537 NCBI chr 3:13,075,022...13,087,943
Ensembl chr 3:13,075,022...13,087,943
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in ISO (PMID:17242191) RGD PMID:17242191 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Spef1 sperm flagellar 1 located_in ISO (PMID:31473225) RGD PMID:31473225 NCBI chr 3:118,390,659...118,396,842
Ensembl chr 3:118,390,575...118,394,531
JBrowse link
G Spn sialophorin located_in IDA PMID:9472040 RGD
UniProt
PMID:8421057 PMID:9472040 RGD:2306196, RGD:13506275 NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628
JBrowse link
G Stard10 StAR-related lipid transfer domain containing 10 located_in
is_active_in
ISO
IBA
(MGI:5499673|PMID:23200860)
PMID:21873635
RGD PMID:23200860 PMID:21873635 MGI:5499673, RGD:13792537 NCBI chr 1:155,722,637...155,748,007
Ensembl chr 1:155,718,389...155,747,094
JBrowse link
G Tek TEK receptor tyrosine kinase located_in ISO (PMID:19424712) RGD PMID:19424712 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Tgfb1 transforming growth factor, beta 1 colocalizes_with ISO
ISS
(PMID:19366691)
GO_REF:0000024
RGD
UniProt
PMID:19366691 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Ush1c USH1 protein network component harmonin located_in ISO (PMID:24725409)
(MGI:5578666|PMID:24725409)
RGD PMID:24725409 MGI:5578666 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 located_in ISO (PMID:12082081) RGD PMID:12082081 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
G Vil1 villin 1 located_in ISO (PMID:17182858)
(MGI:5013879|PMID:21606356)
RGD PMID:17182858 PMID:21606356 MGI:5013879 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858
JBrowse link
G Wwox WW domain-containing oxidoreductase colocalizes_with ISO (PMID:19366691) RGD PMID:19366691 NCBI chr19:42,432,141...43,360,278 JBrowse link
microvillus membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy6 adenylate cyclase 6 IDA RGD PMID:10866989 RGD:2312678 NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754
JBrowse link
G Cd24 CD24 molecule located_in ISO (MGI:2178911|PMID:11978835) RGD PMID:11978835 MGI:2178911 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Cdhr2 cadherin-related family member 2 located_in ISO (PMID:12117771), (PMID:24725409) RGD PMID:12117771 PMID:24725409 NCBI chr17:9,876,853...9,913,356
Ensembl chr17:9,876,860...9,912,575
JBrowse link
G Cdhr5 cadherin-related family member 5 located_in ISS
ISO
GO_REF:0000024
(PMID:24725409)
UniProt
RGD
PMID:24725409 GO_REF:0000024 NCBI chr 1:196,373,110...196,381,609
Ensembl chr 1:196,373,112...196,381,543
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
JBrowse link
G Ceacam20 CEA cell adhesion molecule 20 located_in ISO (MGI:5695712|PMID:26195794), (MGI:5823556|PMID:25908210) RGD PMID:25908210 PMID:26195794 MGI:5695712 MGI:5823556 NCBI chr 1:79,622,077...79,643,782
Ensembl chr 1:79,622,077...79,643,782
JBrowse link
G Ctnnb1 catenin beta 1 located_in IEA
ISO
GO_REF:0000107
(MGI:3617131|PMID:16439479)
Ensembl
RGD
PMID:16439479 GO_REF:0000107 MGI:3617131 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Dpep1 dipeptidase 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:51,209,831...51,237,004
Ensembl chr19:51,219,660...51,235,257
JBrowse link
G Ezr ezrin located_in IDA PMID:11726633 UniProt PMID:11726633 RGD:8554011 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Hfe homeostatic iron regulator NOT IDA RGD PMID:16208485 RGD:1582698 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Itgav integrin subunit alpha V located_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr 3:68,838,524...68,926,653
Ensembl chr 3:68,838,189...68,926,639
JBrowse link
G Itgb3 integrin subunit beta 3 located_in ISO (PMID:25063885) RGD PMID:25063885 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Msn moesin located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Mttp microsomal triglyceride transfer protein IDA RGD PMID:15383310 RGD:1582565 NCBI chr 2:226,613,090...226,654,239
Ensembl chr 2:226,613,090...226,654,239
JBrowse link
G Muc4 mucin 4, cell surface associated IDA RGD PMID:2674161 RGD:2303756 NCBI chr11:68,008,245...68,053,229 JBrowse link
G Pdpn podoplanin located_in ISS
ISO
GO_REF:0000024
(PMID:17046996)
UniProt
RGD
PMID:17046996 GO_REF:0000024 NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
JBrowse link
G Pdzk1 PDZ domain containing 1 IDA RGD PMID:22904329 RGD:7207458 NCBI chr 2:184,376,161...184,407,514
Ensembl chr 2:184,376,161...184,407,514
JBrowse link
G Podxl podocalyxin-like located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:4456941|PMID:17311105)
UniProt
RGD
PMID:17311105 PMID:21873635 GO_REF:0000024 MGI:4456941, RGD:13792537 NCBI chr 4:60,135,124...60,181,829
Ensembl chr 4:60,135,109...60,181,899
JBrowse link
G Prom1 prominin 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Prom2 prominin 2 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:114,747,654...114,761,787
Ensembl chr 3:114,747,654...114,761,787
JBrowse link
G Scarb1 scavenger receptor class B, member 1 IDA RGD PMID:14657200 RGD:1580003 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Slc26a2 solute carrier family 26 member 2 IDA RGD PMID:20369363 RGD:13208865 NCBI chr18:54,648,276...54,666,627
Ensembl chr18:54,652,951...54,666,626
JBrowse link
G Slc34a2 solute carrier family 34 member 2 IDA RGD PMID:22904329 RGD:7207458 NCBI chr14:57,910,931...57,930,236
Ensembl chr14:57,910,480...57,930,436
JBrowse link
G Slc6a6 solute carrier family 6 member 6 part_of
located_in
ISO
IEA
(PMID:15166008)
GO_REF:0000107
RGD
Ensembl
PMID:15166008 GO_REF:0000107 NCBI chr 4:124,195,186...124,268,880
Ensembl chr 4:124,195,218...124,268,875
JBrowse link
G Slc7a5 solute carrier family 7 member 5 part_of ISO (PMID:26050671) RGD PMID:26050671 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
JBrowse link
G Slc7a8 solute carrier family 7 member 8 part_of ISO (PMID:26050671) RGD PMID:26050671 NCBI chr15:28,183,013...28,242,717
Ensembl chr15:28,183,015...28,242,717
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in IDA PMID:11726633 RGD
UniProt
PMID:22904329 PMID:11726633 RGD:7207458, RGD:8554011 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
Schwann cell microvillus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B IDA RGD PMID:1650113 RGD:8548783 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157
JBrowse link
G Ezr ezrin IDA RGD PMID:17045809 RGD:7207801 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Nfasc neurofascin IDA RGD PMID:17045809 RGD:7207801 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880
JBrowse link
stereocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy6 adenylate cyclase 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:129,742,827...129,763,922
Ensembl chr 7:129,742,838...129,763,754
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 is_active_in IDA
ISO
(MGI:5766107|PMID:26754646) RGD PMID:26754646 PMID:16301216 MGI:5766107, RGD:8548636 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 located_in ISO (MGI:3849653|PMID:19478059) RGD PMID:19478059 MGI:3849653 NCBI chr18:58,016,382...58,157,213
Ensembl chr18:58,018,268...58,157,396
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 located_in ISO (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Calb1 calbindin 1 IDA RGD PMID:16120789 RGD:7175527 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
JBrowse link
G Calb2 calbindin 2 IDA RGD PMID:16120789 RGD:7175527 NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438
JBrowse link
G Cdh23 cadherin-related 23 located_in ISO (MGI:2447265|PMID:12485990), (MGI:3577782|PMID:15882574), (MGI:3616414|PMID:16481439), (MGI:3686545|PMID:17050716) RGD PMID:12485990 PMID:15882574 PMID:16481439 PMID:17050716 MGI:2447265 MGI:3577782 MGI:3616414 MGI:3686545 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISO
ISS
(PMID:26173970), (PMID:26426422)
(MGI:5487486|PMID:23023331)
GO_REF:0000024
RGD
UniProt
PMID:23023331 PMID:26173970 PMID:26426422 GO_REF:0000024 MGI:5487486 NCBI chr 8:54,930,265...54,947,157 JBrowse link
G Clic5 chloride intracellular channel 5 located_in ISO (MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:3663248 NCBI chr 9:16,710,980...16,813,427
Ensembl chr 9:16,710,980...16,813,427
JBrowse link
G Clrn1 clarin 1 located_in IEA
ISO
GO_REF:0000107
(MGI:4353969|PMID:19539019)
Ensembl
RGD
PMID:19539019 GO_REF:0000107 MGI:4353969 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Dock4 dedicator of cytokinesis 4 located_in ISO (MGI:3640027|PMID:16464467) RGD PMID:16464467 MGI:3640027 NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855
JBrowse link
G Elmod3 ELMO domain containing 3 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:104,614,665...104,653,122
Ensembl chr 4:104,614,676...104,653,053
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISS
ISO
GO_REF:0000024
(MGI:5000171|PMID:21236676), (MGI:5607381|PMID:24741995)
UniProt
RGD
PMID:21236676 PMID:24741995 GO_REF:0000024 MGI:5000171 MGI:5607381 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Espn espin located_in ISO
IEA
(PMID:29572253)
GO_REF:0000107
(MGI:4881391|PMID:20510926)
RGD
Ensembl
PMID:20510926 PMID:29572253 GO_REF:0000107 MGI:4881391 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal located_in ISO (MGI:4820459|PMID:20660251) RGD PMID:20660251 MGI:4820459 NCBI chr10:105,634,783...105,641,322
Ensembl chr10:105,634,783...105,641,322
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:4421424|PMID:20137774), (MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:20137774 PMID:30380417 PMID:21873635 MGI:4421424 MGI:6278501, RGD:13792537 NCBI chr14:40,004,169...40,126,571
Ensembl chr14:40,004,169...40,126,571
JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Loxhd1 lipoxygenase homology PLAT domains 1 located_in ISO (MGI:4367644|PMID:19732867) RGD PMID:19732867 MGI:4367644 NCBI chr18:70,818,276...70,969,983
Ensembl chr18:70,818,276...70,969,983
JBrowse link
G Myo15a myosin XVA located_in ISO (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr10:45,277,619...45,335,953
Ensembl chr10:45,278,737...45,335,340
JBrowse link
G Myo1c myosin 1C located_in ISO (MGI:3686545|PMID:17050716) RGD PMID:17050716 MGI:3686545 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Myo7a myosin VIIA is_active_in
located_in
ISO (MGI:5766107|PMID:26754646)
(MGI:2447265|PMID:12485990), (MGI:3616414|PMID:16481439), (MGI:4430014|PMID:20016102), (MGI:5806014|PMID:27525485)
RGD PMID:12485990 PMID:16481439 PMID:20016102 PMID:26754646 PMID:27525485 MGI:2447265 MGI:3616414 MGI:4430014 MGI:5766107 MGI:5806014 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Ocm oncomodulin IDA RGD PMID:16120789 RGD:7175527 NCBI chr12:10,535,619...10,596,705
Ensembl chr12:10,586,897...10,596,707
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 located_in ISO (MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:5477842 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
JBrowse link
G Pcdh15 protocadherin related 15 located_in
is_active_in
ISO (MGI:3722521|PMID:14570705)
(MGI:5766107|PMID:26754646)
RGD PMID:14570705 PMID:26754646 MGI:3722521 MGI:5766107 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pdzd7 PDZ domain containing 7 located_in ISO (MGI:5806014|PMID:27525485), (MGI:6376373|PMID:31448880) RGD PMID:27525485 PMID:31448880 MGI:5806014 MGI:6376373 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pls1 plastin 1 located_in ISO (MGI:5608770|PMID:25124451) RGD PMID:25124451 MGI:5608770 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195
JBrowse link
G Pls3 plastin 3 IDA RGD PMID:12378542 RGD:731234 NCBI chr  X:111,589,193...111,683,908
Ensembl chr  X:111,589,254...111,683,891
JBrowse link
G Prom1 prominin 1 located_in ISO (MGI:3051924|PMID:15316084) RGD PMID:15316084 MGI:3051924 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Pvalb parvalbumin IDA RGD PMID:16120789 RGD:7175527 NCBI chr 7:109,772,939...109,787,954
Ensembl chr 7:109,772,593...109,784,561
JBrowse link
G Rdx radixin located_in ISO (MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:3663248 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Rhoc ras homolog family member C located_in ISO (MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:5789047 NCBI chr 2:192,287,065...192,293,292
Ensembl chr 2:192,287,130...192,295,306
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA
ISO
PMID:24958875
(MGI:5789047|PMID:27269051)
RGD PMID:27269051 PMID:24958875 MGI:5789047, RGD:10047244 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Slc4a7 solute carrier family 4 member 7 IDA RGD PMID:16301216 RGD:8548636 NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Slc9a3r2 SLC9A3 regulator 2 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:13,662,461...13,672,975
Ensembl chr10:13,662,461...13,673,049
JBrowse link
G Tprn taperin located_in ISS
ISO
GO_REF:0000024
(MGI:4440409|PMID:20170899), (MGI:5789047|PMID:27269051)
UniProt
RGD
PMID:20170899 PMID:27269051 GO_REF:0000024 MGI:4440409 MGI:5789047 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats located_in ISO (MGI:5430693|PMID:22678063) RGD PMID:22678063 MGI:5430693 NCBI chr20:10,771,806...10,837,419
Ensembl chr20:10,772,219...10,943,914
JBrowse link
G Twf2 twinfilin actin-binding protein 2 located_in ISO (MGI:5285166|PMID:19955359) RGD PMID:19955359 MGI:5285166 NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
JBrowse link
G Ush1c USH1 protein network component harmonin located_in
is_active_in
IDA
ISO
(MGI:2447265|PMID:12485990), (MGI:4430014|PMID:20016102)
(MGI:5766107|PMID:26754646)
RGD PMID:12485990 PMID:20016102 PMID:26754646 PMID:16301216 MGI:2447265 MGI:4430014 MGI:5766107, RGD:8548636 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush2a usherin NOT|located_in IDA
ISO
hair cell
(MGI:5430895|PMID:16301217)
RGD PMID:16301217 PMID:16301216 MGI:5430895, RGD:8548636 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Whrn whirlin located_in IDA
ISO
ISS
(MGI:3528095|PMID:15590699), (MGI:3528099|PMID:15590698), (MGI:3606745|PMID:15654330)
GO_REF:0000024
RGD
UniProt
PMID:15590698 PMID:15590699 PMID:15654330 PMID:16434480 GO_REF:0000024 MGI:3528095 MGI:3528099 MGI:3606745, RGD:1600128 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 located_in ISO (MGI:5755785|PMID:25105228) RGD PMID:25105228 MGI:5755785 NCBI chr 2:39,211,131...39,378,877
Ensembl chr 2:39,212,949...39,378,924
JBrowse link
stereocilium base term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 located_in
is_active_in
ISO
IBA
(MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:30380417 PMID:21873635 MGI:6278501, RGD:13792537 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Myo7a myosin VIIA located_in ISO (MGI:3714249|PMID:17567809) RGD PMID:17567809 MGI:3714249 NCBI chr 1:152,342,611...152,414,171
Ensembl chr 1:152,344,448...152,414,157
JBrowse link
G Pjvk pejvakin located_in ISO (MGI:5887150|PMID:28209736) RGD PMID:28209736 MGI:5887150 NCBI chr 3:61,594,644...61,605,051
Ensembl chr 3:61,596,641...61,605,045
JBrowse link
G Tprn taperin located_in
is_active_in
ISO
IBA
(MGI:5887150|PMID:28209736), (MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:28209736 PMID:30380417 PMID:21873635 MGI:5887150 MGI:6278501, RGD:13792537 NCBI chr 3:8,076,164...8,083,642
Ensembl chr 3:8,075,137...8,083,642
JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (MGI:5887150|PMID:28209736)
(MGI:4881391|PMID:20510926)
RGD PMID:20510926 PMID:28209736 MGI:4881391 MGI:5887150 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
stereocilium coat term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pkhd1l1 PKHD1 like 1 located_in ISO (MGI:6358987|PMID:31444330) RGD PMID:31444330 MGI:6358987 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
JBrowse link
stereocilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B ISO RGD RGD:11556226 NCBI chr 3:7,380,892...7,546,104
Ensembl chr 3:7,380,922...7,546,091
JBrowse link
G Myo1c myosin 1C located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 located_in IDA PMID:24958875 MGI PMID:24958875 RGD:10047244 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Ush2a usherin located_in ISO
IEA
(MGI:5430895|PMID:16301217)
GO_REF:0000107
RGD
Ensembl
PMID:16301217 GO_REF:0000107 MGI:5430895 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:28,512,214...28,597,429
Ensembl chr 7:28,534,249...28,597,356
JBrowse link
stereocilium shaft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fchsd2 FCH and double SH3 domains 2 located_in ISO (MGI:6233193|PMID:23437151) RGD PMID:23437151 MGI:6233193 NCBI chr 1:155,444,471...155,685,539
Ensembl chr 1:155,444,460...155,685,539
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 located_in
is_active_in
ISO
IBA
(MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:30380417 PMID:21873635 MGI:6278501, RGD:13792537 NCBI chr18:33,984,689...33,998,094
Ensembl chr18:33,984,689...33,998,094
JBrowse link
G Triobp TRIO and F-actin binding protein located_in ISO (MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:4881391 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A located_in ISO (MGI:6118860|PMID:29293958) RGD PMID:29293958 MGI:6118860 NCBI chr 2:204,225,540...204,380,927
Ensembl chr 2:204,225,540...204,380,927
JBrowse link
G Cdh23 cadherin-related 23 located_in IEA
ISO
GO_REF:0000107
(MGI:2447265|PMID:12485990), (MGI:3686545|PMID:17050716), (MGI:5578076|PMID:24920589)
Ensembl
RGD
PMID:12485990 PMID:17050716 PMID:24920589 GO_REF:0000107 MGI:2447265 MGI:3686545 MGI:5578076 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component located_in
is_active_in
IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(MGI:4947458|PMID:21368133)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21368133 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4947458, RGD:13792537 NCBI chr 1:79,514,975...79,524,871
Ensembl chr 1:79,514,975...79,524,871
JBrowse link
G Coro1a coronin 1A is_active_in ISO (MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:5766107 NCBI chr 1:181,295,561...181,300,566
Ensembl chr 1:181,295,562...181,300,534
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 4:170,388,378...170,486,873
Ensembl chr 4:170,388,378...170,486,873
JBrowse link
G Eps8l2 EPS8-like 2 located_in ISO (MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:5509070 NCBI chr 1:196,446,067...196,471,542
Ensembl chr 1:196,446,287...196,471,541
JBrowse link
G Espn espin located_in
is_active_in
ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
(MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
UniProt
RGD
PMID:22264607 PMID:26754646 GO_REF:0000024 MGI:5315207 MGI:5766107 NCBI chr 5:162,626,560...162,660,439
Ensembl chr 5:162,626,560...162,660,256
JBrowse link
G Espnl espin-like located_in
is_active_in
ISO (MGI:5805759|PMID:26926603)
(MGI:5766107|PMID:26754646)
RGD PMID:26754646 PMID:26926603 MGI:5766107 MGI:5805759 NCBI chr 9:91,912,049...91,935,292
Ensembl chr 9:91,912,049...91,935,292
JBrowse link
G Homer2 homer scaffold protein 2 located_in ISS
ISO
GO_REF:0000024
(MGI:5688813|PMID:25816005)
UniProt
RGD
PMID:25816005 GO_REF:0000024 MGI:5688813 NCBI chr 1:135,558,977...135,659,780
Ensembl chr 1:135,567,414...135,659,772
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 located_in ISO (MGI:5468200|PMID:23217710) RGD PMID:23217710 MGI:5468200 NCBI chr20:6,632,362...6,642,534
Ensembl chr20:6,632,362...6,642,532
JBrowse link
G Morn4 MORN repeat containing 4 located_in
is_active_in
ISS
ISO
GO_REF:0000024
(MGI:5766107|PMID:26754646)
UniProt
RGD
PMID:26754646 GO_REF:0000024 MGI:5766107 NCBI chr 1:240,888,338...240,898,644
Ensembl chr 1:240,888,344...240,898,716
JBrowse link
G Myo3a myosin IIIA located_in
is_active_in
ISO (MGI:4849846|PMID:21165622), (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
(MGI:5766107|PMID:26754646)
RGD PMID:21165622 PMID:22264607 PMID:26754646 MGI:4849846 MGI:5315207 MGI:5766107 NCBI chr17:84,554,785...84,604,748
Ensembl chr17:84,543,552...84,759,042
JBrowse link
G Myo3b myosin IIIB located_in
is_active_in
ISO (MGI:5315207|PMID:22264607), (MGI:5766107|PMID:26754646)
(MGI:5766107|PMID:26754646)
RGD PMID:22264607 PMID:26754646 MGI:5315207 MGI:5766107 NCBI chr 3:54,873,704...55,226,189
Ensembl chr 3:54,820,251...55,227,373
JBrowse link
G Pdzd7 PDZ domain containing 7 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:243,888,295...243,907,778
Ensembl chr 1:243,888,281...243,906,839
JBrowse link
G Pkhd1l1 PKHD1 like 1 located_in ISO (MGI:6358987|PMID:31444330) RGD PMID:31444330 MGI:6358987 NCBI chr 7:75,620,384...75,795,335
Ensembl chr 7:75,620,484...75,795,335
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 located_in ISO (MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:5578076 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Strc stereocilin located_in
is_active_in
ISO
IBA
(MGI:3818235|PMID:18849963), (MGI:5430850|PMID:21165971), (MGI:5578076|PMID:24920589), (MGI:6376373|PMID:31448880)
PMID:21873635
RGD PMID:18849963 PMID:21165971 PMID:24920589 PMID:31448880 PMID:21873635 MGI:3818235 MGI:5430850 MGI:5578076 MGI:6376373, RGD:13792537 NCBI chr 3:108,335,920...108,355,114
Ensembl chr 3:108,335,747...108,354,134
JBrowse link
G Tmc1 transmembrane channel-like 1 located_in ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 1:218,275,262...218,445,955
Ensembl chr 1:218,276,417...218,445,955
JBrowse link
G Tmc2 transmembrane channel-like 2 located_in ISO (MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:5320864 NCBI chr 3:117,396,378...117,464,336
Ensembl chr 3:117,396,378...117,464,336
JBrowse link
G Ush1c USH1 protein network component harmonin is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Whrn whirlin located_in
is_active_in
IDA
IBA
ISO
IEA
PMID:23055499
PMID:21873635
(MGI:5565635|PMID:24334608), (MGI:6376373|PMID:31448880)
GO_REF:0000107
RGD
Ensembl
PMID:24334608 PMID:31448880 PMID:23055499 PMID:21873635 GO_REF:0000107 MGI:5565635 MGI:6376373, RGD:13800540, RGD:13792537 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20009
    cellular anatomical entity 19717
      cell projection 2603
        plasma membrane bounded cell projection 2526
          actin-based cell projection 240
            actin filament bundle of actin-based cell projection + 0
            filopodium + 110
            microvillus + 104
            stereocilium + 62
paths to the root