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ONTOLOGY REPORT - ANNOTATIONS


Term:actin-based cell projection
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Accession:GO:0098858 term browser browse the term
Definition:A cell projection supported by an assembly of actin filaments, and which lacks microtubules.


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actin-based cell projection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myo15a myosin XVA IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,840,098...46,897,362
Ensembl chr10:46,840,113...46,896,054
JBrowse link
G Myo1e myosin IE IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,644,715...76,840,240
Ensembl chr 8:76,754,492...76,839,593
JBrowse link
G Myo1f myosin IF IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:18,440,742...18,491,448
Ensembl chr 7:18,440,742...18,491,448
JBrowse link
dendritic filopodium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbn1 drebrin 1 IDA RGD PMID:12878700 RGD:10398728 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Fmr1 FMRP translational regulator 1 IDA
IBA
ISO
PMID:16098134
PMID:21873635
(MGI:MGI:3655188|PMID:16631377), (MGI:MGI:3798322|PMID:18539120)
RGD PMID:16631377, PMID:18539120, PMID:16098134, PMID:21873635, PMID:15028757 MGI:MGI:3655188, MGI:MGI:3798322, RGD:1601176, RGD:13792537, RGD:1300188 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:120,529,716...120,570,356
Ensembl chr 2:120,512,899...120,570,355
JBrowse link
G Fxr2 FMR1 autosomal homolog 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:56,237,814...56,257,877
Ensembl chr10:56,237,755...56,257,890
JBrowse link
G Map2 microtubule-associated protein 2 IDA PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chr 9:73,204,753...73,462,965
Ensembl chr 9:73,319,710...73,462,972
JBrowse link
filopodium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp3 acid phosphatase 3 IEA
ISO
GO_REF:0000107
(MGI:MGI:5284775|PMID:17658863)
Ensembl
RGD
PMID:17658863 GO_REF:0000107, MGI:MGI:5284775 NCBI chr 8:112,838,574...112,884,062
Ensembl chr 8:112,834,707...112,884,077
JBrowse link
G Acta1 actin, alpha 1, skeletal muscle ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr19:56,674,072...56,677,084
Ensembl chr19:56,674,074...56,677,084
JBrowse link
G Acta2 actin alpha 2, smooth muscle ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:252,537,614...252,550,394
Ensembl chr 1:252,537,615...252,550,394
JBrowse link
G Actc1 actin, alpha, cardiac muscle 1 ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 3:105,507,403...105,512,939
Ensembl chr 3:105,507,403...105,512,939
JBrowse link
G Actg2 actin gamma 2, smooth muscle ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 4:115,215,160...115,239,746
Ensembl chr 4:115,215,060...115,239,723
JBrowse link
G Actn2 actinin alpha 2 ISO (PMID:12356918) RGD PMID:12356918 NCBI chr17:66,304,530...66,397,647
Ensembl chr17:66,304,501...66,397,653
JBrowse link
G B4galt1 beta-1,4-galactosyltransferase 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 5:57,121,768...57,168,610
Ensembl chr 5:57,121,769...57,168,610
JBrowse link
G Baiap2 BAR/IMD domain containing adaptor protein 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:109,107,326...109,187,458
Ensembl chr10:109,107,389...109,187,115
JBrowse link
G Cd302 CD302 molecule ISO
IEA
(PMID:17947679)
GO_REF:0000107
RGD
Ensembl
PMID:17947679 GO_REF:0000107 NCBI chr 3:46,327,382...46,361,092
Ensembl chr 3:46,327,383...46,361,092
JBrowse link
G Cdc42 cell division cycle 42 ISO (PMID:11035016) RGD PMID:11035016 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO (MGI:MGI:2446382|PMID:12496365) RGD PMID:12496365 MGI:MGI:2446382 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Cfl1 cofilin 1 IDA RGD PMID:24515839 RGD:11570532 NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
JBrowse link
G Crp C-reactive protein IDA RGD PMID:22090504 RGD:6904210 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule ISO
ISS
(MGI:MGI:5294315|PMID:10814828)
GO_REF:0000024
RGD
UniProt
PMID:10814828 GO_REF:0000024, MGI:MGI:5294315 NCBI chr11:16,826,269...16,873,564
Ensembl chr11:16,826,399...16,873,562
JBrowse link
G Dag1 dystroglycan 1 ISO (PMID:18341635) RGD PMID:18341635 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Dbn1 drebrin 1 IDA RGD PMID:19222710 RGD:10395284 NCBI chr17:9,679,511...9,693,878
Ensembl chr17:9,679,628...9,693,820
JBrowse link
G Dmd dystrophin ISO (PMID:16803572) RGD PMID:16803572 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Dnali1 dynein, axonemal, light intermediate chain 1 ISO
IBA
(MGI:MGI:3628860|PMID:16496424)
PMID:21873635
RGD PMID:16496424, PMID:21873635 MGI:MGI:3628860, RGD:13792537 NCBI chr 5:143,053,365...143,062,203
Ensembl chr 5:143,053,367...143,062,226
JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 ISO
IEA
(MGI:MGI:3628860|PMID:16496424)
GO_REF:0000107
RGD
Ensembl
PMID:16496424 GO_REF:0000107, MGI:MGI:3628860 NCBI chr 6:134,958,854...135,085,769
Ensembl chr 6:134,958,854...135,085,769
JBrowse link
G Dync2i2 dynein 2 intermediate chain 2 ISO (MGI:MGI:5906938|PMID:28379358) RGD PMID:28379358 MGI:MGI:5906938 NCBI chr 3:8,599,251...8,615,329
Ensembl chr 3:8,599,148...8,615,532
JBrowse link
G Enah ENAH, actin regulator ISO (MGI:MGI:1331576|PMID:10069337), (MGI:MGI:3046012|PMID:15148305) RGD PMID:10069337, PMID:15148305 MGI:MGI:1331576, MGI:MGI:3046012 NCBI chr13:100,297,421...100,415,335
Ensembl chr13:100,300,054...100,414,226
JBrowse link
G Epha4 Eph receptor A4 IDA RGD PMID:19086003 RGD:5688744 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Ermn ermin ISO
IBA
(MGI:MGI:3612229|PMID:16421295)
PMID:21873635
RGD PMID:16421295, PMID:21873635 MGI:MGI:3612229, RGD:13792537 NCBI chr 3:44,080,350...44,086,006
Ensembl chr 3:44,068,057...44,086,022
JBrowse link
G Ezr ezrin IDA
ISO
(PMID:12082081), (PMID:23106337) RGD PMID:12082081, PMID:23106337, PMID:21753079 RGD:7207797 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr15:106,375,298...106,625,837
Ensembl chr15:106,434,177...106,625,837
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO (MGI:MGI:3046012|PMID:15148305) RGD PMID:15148305 MGI:MGI:3046012 NCBI chr16:50,372,150...50,501,716
Ensembl chr16:50,372,128...50,501,921
JBrowse link
G Fgd4 FYVE, RhoGEF and PH domain containing 4 ISO
IEA
(MGI:MGI:2179874|PMID:11527409)
GO_REF:0000107
RGD
Ensembl
PMID:11527409 GO_REF:0000107, MGI:MGI:2179874 NCBI chr11:88,699,222...88,796,677
Ensembl chr11:88,699,222...88,796,677
JBrowse link
G Fgf13 fibroblast growth factor 13 ISO
ISS
(MGI:MGI:5431268|PMID:22726441)
GO_REF:0000024
RGD
UniProt
PMID:22726441 GO_REF:0000024, MGI:MGI:5431268 NCBI chr  X:142,053,648...142,589,274
Ensembl chr  X:142,053,654...142,248,369
JBrowse link
G Fscn1 fascin actin-bundling protein 1 IDA
IBA
ISO
PMID:21873635
(MGI:MGI:3051184|PMID:15294161), (MGI:MGI:3766664|PMID:17671164), (MGI:MGI:5603691|PMID:24720729)
(PMID:20137952), (PMID:3525578)
RGD PMID:3525578, PMID:15294161, PMID:17671164, PMID:20137952, PMID:24720729, PMID:8769857, PMID:21873635 MGI:MGI:3051184, MGI:MGI:3766664, MGI:MGI:5603691, RGD:2317774, RGD:13792537 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515
JBrowse link
G Fscn3 fascin actin-bundling protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:55,719,976...55,729,442
Ensembl chr 4:55,720,010...55,729,457
JBrowse link
G Gpm6a glycoprotein m6a IDA
IBA
PMID:16286650
PMID:21873635
UniProt
GO_Central
PMID:16286650, PMID:21873635 RGD:8554337, RGD:13792537 NCBI chr16:39,367,697...39,719,292
Ensembl chr16:39,367,692...39,719,187
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:166,898,177...166,912,524
Ensembl chr 1:166,899,894...166,912,524
JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 ISO (PMID:12515716) RGD PMID:12515716 NCBI chr 2:26,161,628...26,439,067
Ensembl chr 2:26,167,199...26,438,790
JBrowse link
G Itga6 integrin subunit alpha 6 IDA RGD PMID:13130099 RGD:1302259 NCBI chr 3:58,442,904...58,515,124
Ensembl chr 3:58,443,101...58,515,124
JBrowse link
G Itgb1 integrin subunit beta 1 ISO
IEA
(PMID:16803572)
GO_REF:0000107
RGD
Ensembl
PMID:16803572 GO_REF:0000107 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Kcnn3 potassium calcium-activated channel subfamily N member 3 IDA RGD PMID:17459146 RGD:7175515 NCBI chr 2:188,837,280...188,991,794
Ensembl chr 2:188,844,073...188,988,774
JBrowse link
G Kitlg KIT ligand ISO
IEA
ISS
(PMID:26522471)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:26522471 GO_REF:0000024, GO_REF:0000044 NCBI chr 7:42,269,784...42,351,054
Ensembl chr 7:42,269,784...42,351,054
JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 ISO (PMID:16636079) RGD PMID:16636079 NCBI chr15:57,170,566...57,277,811
Ensembl chr15:57,221,292...57,277,811
JBrowse link
G Lrrc7 leucine rich repeat containing 7 IDA RGD PMID:18248607 RGD:2314403 NCBI chr 2:264,910,594...265,300,860
Ensembl chr 2:264,910,594...265,300,868
JBrowse link
G Msn moesin IEA
ISO
GO_REF:0000107
(PMID:12082081), (PMID:24065547)
Ensembl
RGD
PMID:12082081, PMID:24065547 GO_REF:0000107 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Mtm1 myotubularin 1 ISO
IEA
ISS
(PMID:12118066)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:12118066 GO_REF:0000024, GO_REF:0000044 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409
JBrowse link
G Myo10 myosin X ISO (MGI:MGI:3614365|PMID:16371656) RGD PMID:16371656 MGI:MGI:3614365 NCBI chr 2:77,868,398...78,072,443
Ensembl chr 2:77,868,412...78,071,309
JBrowse link
G Myo1b myosin Ib IDA PMID:20610386 UniProt PMID:20610386 RGD:8554686 NCBI chr 9:54,706,005...54,766,054
Ensembl chr 9:54,558,202...54,766,054
JBrowse link
G Myo1g myosin IG ISO (MGI:MGI:5566942|PMID:24310084) RGD PMID:24310084 MGI:MGI:5566942 NCBI chr14:86,781,243...86,796,393
Ensembl chr14:86,781,202...86,796,378
JBrowse link
G Myo3a myosin IIIA ISO (PMID:17021180) RGD PMID:17021180 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo6 myosin VI IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Nf2 neurofibromin 2 ISO
IEA
(MGI:MGI:1202233|PMID:9563848)
GO_REF:0000107
RGD
Ensembl
PMID:9563848 GO_REF:0000107, MGI:MGI:1202233 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Palld palladin, cytoskeletal associated protein IDA RGD PMID:12932445 RGD:2325786 NCBI chr16:31,865,712...31,948,168 JBrowse link
G Palm paralemmin ISO (MGI:MGI:5009384|PMID:18287537) RGD PMID:18287537 MGI:MGI:5009384 NCBI chr 7:12,708,024...12,721,055
Ensembl chr 7:12,708,015...12,793,711
JBrowse link
G Pdpn podoplanin ISO
IBA
ISS
(MGI:MGI:1351508|PMID:10574709)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:10574709, PMID:21873635 GO_REF:0000024, MGI:MGI:1351508, RGD:13792537 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Podxl podocalyxin-like ISO
IEA
ISS
(PMID:18456258)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:18456258 GO_REF:0000024, GO_REF:0000044 NCBI chr 4:58,829,049...58,893,353
Ensembl chr 4:58,829,060...58,893,170
JBrowse link
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A ISO
IDA
(MGI:MGI:3583726|PMID:15996550) RGD PMID:15996550, PMID:15473970, PMID:16899074 MGI:MGI:3583726, RGD:10043779, RGD:10002752 NCBI chr 4:29,976,485...30,247,371
Ensembl chr 4:29,978,739...30,241,911
JBrowse link
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B ISO
ISS
(MGI:MGI:3583726|PMID:15996550)
GO_REF:0000024
(PMID:19151759)
RGD
UniProt
PMID:15996550, PMID:19151759 GO_REF:0000024, MGI:MGI:3583726 NCBI chr10:82,800,704...82,816,735
Ensembl chr10:82,800,704...82,816,731
JBrowse link
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 IDA RGD PMID:9660874 RGD:9589123 NCBI chr 4:49,941,046...50,140,764
Ensembl chr 4:49,941,304...50,140,762
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IDA
IEA
ISO
PMID:21047789
GO_REF:0000107
(PMID:21047789)
Ensembl
RGD
PMID:21047789, PMID:21047789 GO_REF:0000107, RGD:10054076 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551
JBrowse link
G Rdx radixin ISO (MGI:MGI:1202233|PMID:9563848), (MGI:MGI:5645204|PMID:21047789) RGD PMID:9563848, PMID:21047789 MGI:MGI:1202233, MGI:MGI:5645204 NCBI chr 8:56,570,728...56,612,851
Ensembl chr 8:56,585,396...56,610,612
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 ISO
ISS
(PMID:17150207)
GO_REF:0000024
RGD
UniProt
PMID:17150207 GO_REF:0000024 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Rufy3 RUN and FYVE domain containing 3 IDA PMID:17439943 HGNC PMID:17439943 RGD:8554472 NCBI chr14:21,058,575...21,144,775
Ensembl chr14:21,058,595...21,128,505
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein colocalizes_with ISO (MGI:MGI:5913054|PMID:28098138) RGD PMID:28098138 MGI:MGI:5913054 NCBI chr10:57,415,429...57,436,412
Ensembl chr10:57,415,832...57,436,368
JBrowse link
G Shtn1 shootin 1 IDA
IEA
PMID:18519736
GO_REF:0000044
PMID:23453953
UniProt PMID:18519736, PMID:23453953 GO_REF:0000044, RGD:10054086, RGD:10054078 NCBI chr 1:280,129,228...280,233,873
Ensembl chr 1:280,130,504...280,233,929
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Snap25 synaptosome associated protein 25 IDA RGD PMID:10625663 RGD:1299445 NCBI chr 3:129,697,408...129,788,417
Ensembl chr 3:129,599,353...129,788,400
JBrowse link
G Spata13 spermatogenesis associated 13 ISO (PMID:17599059) RGD PMID:17599059 NCBI chr15:40,937,652...41,066,645
Ensembl chr15:40,937,708...41,066,769
JBrowse link
G Srcin1 SRC kinase signaling inhibitor 1 IDA RGD PMID:10625663 RGD:1299445 NCBI chr10:85,460,059...85,517,671
Ensembl chr10:85,460,059...85,517,683
JBrowse link
G Tenm2 teneurin transmembrane protein 2 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:20,846,091...21,791,771
Ensembl chr10:20,844,899...21,265,026
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:47,698,915...47,737,902
Ensembl chr12:47,698,947...47,737,902
JBrowse link
G Tubb3 tubulin, beta 3 class III ISS
ISO
GO_REF:0000024
(MGI:MGI:5906064|PMID:28483977)
UniProt
RGD
PMID:28483977 GO_REF:0000024, MGI:MGI:5906064 NCBI chr19:56,220,759...56,229,813
Ensembl chr19:56,220,755...56,229,813
JBrowse link
G Twf1 twinfilin actin-binding protein 1 ISO (MGI:MGI:2673741|PMID:12807912) RGD PMID:12807912 MGI:MGI:2673741 NCBI chr 7:135,838,647...135,850,542
Ensembl chr 7:135,838,648...135,850,542
JBrowse link
G Twf2 twinfilin actin-binding protein 2 ISO (MGI:MGI:2673741|PMID:12807912) RGD PMID:12807912 MGI:MGI:2673741 NCBI chr 8:114,897,011...114,909,531
Ensembl chr 8:114,897,011...114,909,531
JBrowse link
G Unc5c unc-5 netrin receptor C ISS
ISO
IEA
GO_REF:0000024
(MGI:MGI:5906064|PMID:28483977)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28483977 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5906064 NCBI chr 2:247,045,813...247,397,483
Ensembl chr 2:247,248,407...247,397,483
JBrowse link
G Utrn utrophin ISO (PMID:16803572) RGD PMID:16803572 NCBI chr 1:6,451,809...6,970,040
Ensembl chr 1:6,451,810...6,970,040
JBrowse link
G Vamp7 vesicle-associated membrane protein 7 IDA MMO:0000538 RGD PMID:19745841 RGD:8554110 NCBI chr12:18,996,566...19,033,714
Ensembl chr12:18,996,591...19,030,381
JBrowse link
G Vasp vasodilator-stimulated phosphoprotein ISO (MGI:MGI:3046012|PMID:15148305), (MGI:MGI:3051184|PMID:15294161) RGD PMID:15148305, PMID:15294161 MGI:MGI:3046012, MGI:MGI:3051184 NCBI chr 1:80,170,608...80,185,882
Ensembl chr 1:80,170,619...80,185,882
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO (PMID:12082081) RGD PMID:12082081 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Vil1 villin 1 ISO (PMID:15342783)
(MGI:MGI:4943407|PMID:16008578)
RGD PMID:15342783, PMID:16008578 MGI:MGI:4943407 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link
filopodium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 IDA RGD PMID:12177200 RGD:2313249 NCBI chr 6:99,356,509...99,361,909
Ensembl chr 6:99,356,509...99,361,909
JBrowse link
G Antxr1 ANTXR cell adhesion molecule 1 IEA
ISO
GO_REF:0000107
(PMID:16762926)
Ensembl
RGD
PMID:16762926 GO_REF:0000107 NCBI chr 4:118,946,267...119,131,202
Ensembl chr 4:118,946,268...119,131,202
JBrowse link
G Arf6 ADP-ribosylation factor 6 ISO (PMID:14978216) RGD PMID:14978216 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Dmd dystrophin ISO (PMID:16803572) RGD PMID:16803572 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Fzd9 frizzled class receptor 9 ISO (MGI:MGI:1309796|PMID:10198163) RGD PMID:10198163 MGI:MGI:1309796 NCBI chr12:24,473,981...24,476,295
Ensembl chr12:24,473,981...24,476,295
JBrowse link
G Gap43 growth associated protein 43 ISO (PMID:14978216) RGD PMID:14978216 NCBI chr11:58,624,198...58,717,916
Ensembl chr11:58,624,198...58,717,914
JBrowse link
G Itga3 integrin subunit alpha 3 ISO (PMID:10455171) RGD PMID:10455171 NCBI chr10:82,855,841...82,887,755
Ensembl chr10:82,855,613...82,887,497
JBrowse link
G Itgav integrin subunit alpha V ISO (PMID:25063885) RGD PMID:25063885 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgb3 integrin subunit beta 3 ISO (PMID:25063885) RGD PMID:25063885 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Msn moesin IDA RGD PMID:10945828 RGD:727296 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Myo10 myosin X IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:77,868,398...78,072,443
Ensembl chr 2:77,868,412...78,071,309
JBrowse link
G Palm paralemmin ISO (PMID:14978216) RGD PMID:14978216 NCBI chr 7:12,708,024...12,721,055
Ensembl chr 7:12,708,015...12,793,711
JBrowse link
G Pdpn podoplanin ISO
ISS
(PMID:17046996)
GO_REF:0000024
RGD
UniProt
PMID:17046996 GO_REF:0000024 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 ISO (PMID:15671068) RGD PMID:15671068 NCBI chr 6:98,884,269...99,153,551 JBrowse link
G Tbc1d10c TBC1 domain family, member 10C ISO (PMID:17562788) RGD PMID:17562788 NCBI chr 1:219,431,094...219,439,102
Ensembl chr 1:219,431,997...219,438,779
JBrowse link
G Ttyh1 tweety family member 1 ISO (MGI:MGI:3702737|PMID:17116230) RGD PMID:17116230 MGI:MGI:3702737 NCBI chr 1:73,734,614...73,753,157
Ensembl chr 1:73,734,624...73,753,128
JBrowse link
G Utrn utrophin ISO (PMID:16803572) RGD PMID:16803572 NCBI chr 1:6,451,809...6,970,040
Ensembl chr 1:6,451,810...6,970,040
JBrowse link
filopodium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 IEA
ISO
GO_REF:0000107
(PMID:11516653)
Ensembl
RGD
PMID:11516653 GO_REF:0000107 NCBI chr17:89,951,662...90,033,334
Ensembl chr17:89,951,752...90,033,328
JBrowse link
G Abi2 abl-interactor 2 ISO (PMID:11516653) RGD PMID:11516653 NCBI chr 9:67,234,612...67,284,504
Ensembl chr 9:67,234,303...67,282,600
JBrowse link
G Abitram actin binding transcription modulator ISO
IBA
(MGI:MGI:5632379|PMID:24782708)
PMID:21873635
RGD PMID:24782708, PMID:21873635 MGI:MGI:5632379, RGD:13792537 NCBI chr 5:73,552,952...73,560,240
Ensembl chr 5:73,552,983...73,556,987
JBrowse link
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 ISO (MGI:MGI:5529726|PMID:24305805) RGD PMID:24305805 MGI:MGI:5529726 NCBI chr 1:100,896,582...100,926,443
Ensembl chr 1:100,896,947...100,926,335
JBrowse link
G Cib1 calcium and integrin binding 1 ISO
ISS
(PMID:20951827)
GO_REF:0000024
RGD
UniProt
PMID:20951827 GO_REF:0000024 NCBI chr 1:142,014,962...142,020,461
Ensembl chr 1:142,014,958...142,020,525
JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 IDA RGD PMID:16260607 RGD:11557987 NCBI chr 1:114,258,773...114,347,138
Ensembl chr 1:114,258,719...114,347,137
JBrowse link
G Ephb1 Eph receptor B1 ISO (MGI:MGI:5529726|PMID:24305805) RGD PMID:24305805 MGI:MGI:5529726 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO
IEA
ISS
(MGI:MGI:3655188|PMID:16631377)
GO_REF:0000044
GO_REF:0000024
RGD
UniProt
PMID:16631377 GO_REF:0000024, GO_REF:0000044, MGI:MGI:3655188 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Fzd3 frizzled class receptor 3 ISO (MGI:MGI:5529726|PMID:24305805) RGD PMID:24305805 MGI:MGI:5529726 NCBI chr15:48,601,259...48,670,257
Ensembl chr15:48,601,266...48,670,257
JBrowse link
G Morn4 MORN repeat containing 4 ISO
ISS
(PMID:25822849)
GO_REF:0000024
RGD
UniProt
PMID:25822849 GO_REF:0000024 NCBI chr 1:261,323,079...261,333,383
Ensembl chr 1:261,323,083...261,333,383
JBrowse link
G Myo10 myosin X ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:77,868,398...78,072,443
Ensembl chr 2:77,868,412...78,071,309
JBrowse link
G Myo3a myosin IIIA ISO (MGI:MGI:5315207|PMID:22264607)
(PMID:25822849)
RGD PMID:22264607, PMID:25822849 MGI:MGI:5315207 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO PR:Q9ET47 (MGI:MGI:5315207|PMID:22264607) RGD PMID:22264607 MGI:MGI:5315207 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Myo5a myosin VA ISO
IEA
(PMID:24006491)
GO_REF:0000107
RGD
Ensembl
PMID:24006491 GO_REF:0000107 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617
JBrowse link
G Myo9b myosin IXb ISO (MGI:MGI:3720403|PMID:17314409) RGD PMID:17314409 MGI:MGI:3720403 NCBI chr16:19,669,373...19,754,065
Ensembl chr16:19,669,411...19,754,069
JBrowse link
G Nlgn1 neuroligin 1 IDA PMID:19450252 BHF-UCL PMID:19450252 RGD:8553605 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Ttyh1 tweety family member 1 ISO (MGI:MGI:3702737|PMID:17116230) RGD PMID:17116230 MGI:MGI:3702737 NCBI chr 1:73,734,614...73,753,157
Ensembl chr 1:73,734,624...73,753,128
JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K ISO (MGI:MGI:5603752|PMID:18511602) RGD PMID:18511602 MGI:MGI:5603752 NCBI chr14:44,289,247...44,348,691
Ensembl chr14:44,289,247...44,348,691
JBrowse link
G Vil1 villin 1 ISO (MGI:MGI:4943407|PMID:16008578) RGD PMID:16008578 MGI:MGI:4943407 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link
growth cone filopodium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1 amyloid beta precursor protein binding family B member 1 IDA RGD PMID:12843239 RGD:10053998 NCBI chr 1:170,387,625...170,411,263
Ensembl chr 1:170,387,609...170,404,056
JBrowse link
G App amyloid beta precursor protein IDA RGD PMID:12843239 RGD:10053998 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Fmr1 FMRP translational regulator 1 ISO
ISS
(MGI:MGI:3655188|PMID:16631377)
GO_REF:0000024
RGD
UniProt
PMID:16631377 GO_REF:0000024, MGI:MGI:3655188 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Itga3 integrin subunit alpha 3 IDA MMO:0000662 RGD PMID:7544141 RGD:13593531 NCBI chr10:82,855,841...82,887,755
Ensembl chr10:82,855,613...82,887,497
JBrowse link
microvillus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07036550.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr12:48,011,100...48,048,540 JBrowse link
G Angpt1 angiopoietin 1 IEA
ISO
GO_REF:0000107
(PMID:19424712)
Ensembl
RGD
PMID:19424712 GO_REF:0000107 NCBI chr 7:81,338,327...81,592,459
Ensembl chr 7:81,342,280...81,592,206
JBrowse link
G Anks4b ankyrin repeat and sterile alpha motif domain containing 4B ISO (PMID:26812018)
(MGI:MGI:5763318|PMID:26812018)
RGD PMID:26812018 MGI:MGI:5763318 NCBI chr 1:189,940,305...189,942,113
Ensembl chr 1:189,940,291...189,942,112
JBrowse link
G Aoc3 amine oxidase, copper containing 3 ISO (PMID:23349812) RGD PMID:23349812 NCBI chr10:89,251,370...89,259,313
Ensembl chr10:89,251,370...89,259,313
JBrowse link
G Aqp5 aquaporin 5 ISO (MGI:MGI:2154040|PMID:11707570) RGD PMID:11707570 MGI:MGI:2154040 NCBI chr 7:141,249,044...141,252,576
Ensembl chr 7:141,249,044...141,252,578
JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A ISO (MGI:MGI:4943380|PMID:18667600) RGD PMID:18667600 MGI:MGI:4943380 NCBI chr11:61,531,386...61,584,634
Ensembl chr11:61,531,416...61,584,634
JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 ISS
ISO
GO_REF:0000024
(MGI:MGI:3760063|PMID:17392376), (MGI:MGI:4943380|PMID:18667600)
UniProt
RGD
PMID:17392376, PMID:18667600 GO_REF:0000024, MGI:MGI:3760063, MGI:MGI:4943380 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 ISO (MGI:MGI:4943380|PMID:18667600), (MGI:MGI:4943394|PMID:17898041) RGD PMID:17898041, PMID:18667600 MGI:MGI:4943380, MGI:MGI:4943394 NCBI chr16:22,326,537...22,350,143
Ensembl chr16:22,326,529...22,350,155
JBrowse link
G Atp6v1e1 ATPase H+ transporting V1 subunit E1 ISO
IEA
(MGI:MGI:4943380|PMID:18667600)
GO_REF:0000107
RGD
Ensembl
PMID:18667600 GO_REF:0000107, MGI:MGI:4943380 NCBI chr 4:153,351,434...153,373,558
Ensembl chr 4:153,351,421...153,373,649
JBrowse link
G Atp7a ATPase copper transporting alpha IDA RGD PMID:24614235 RGD:11341682 NCBI chr  X:77,076,085...77,193,644
Ensembl chr  X:77,076,106...77,193,644
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO (MGI:MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:MGI:5615303 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Bpifa1 BPI fold containing family A, member 1 IDA RGD PMID:11821380 RGD:625372 NCBI chr 3:149,624,867...149,630,610
Ensembl chr 3:149,624,712...149,630,613
JBrowse link
G Car2 carbonic anhydrase 2 IDA RGD PMID:16575514 RGD:1600701 NCBI chr 2:88,097,740...88,112,868
Ensembl chr 2:88,097,720...88,113,029
JBrowse link
G Cblif cobalamin binding intrinsic factor IEA
ISO
GO_REF:0000107
(PMID:8886952)
Ensembl
RGD
PMID:8886952 GO_REF:0000107 NCBI chr 1:228,118,048...228,132,296
Ensembl chr 1:228,118,048...228,132,404
JBrowse link
G Cbr1 carbonyl reductase 1 IDA RGD PMID:16457595 RGD:2316271 NCBI chr11:33,813,041...33,815,418
Ensembl chr11:33,845,463...33,847,793
JBrowse link
G Cd302 CD302 molecule IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:46,327,382...46,361,092
Ensembl chr 3:46,327,383...46,361,092
JBrowse link
G Cd44 CD44 molecule (Indian blood group) ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000044
(MGI:MGI:6115186|PMID:9472040)
UniProt
RGD
PMID:9472040 GO_REF:0000024, GO_REF:0000044, MGI:MGI:6115186 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cftr CF transmembrane conductance regulator IDA RGD PMID:16575514 RGD:1600701 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Clca1 chloride channel accessory 1 ISO (MGI:MGI:5471906|PMID:23266329) RGD PMID:23266329 MGI:MGI:5471906 NCBI chr 2:250,897,980...250,923,711
Ensembl chr 2:250,897,969...250,923,744
JBrowse link
G Clic4 chloride intracellular channel 4 ISO
IEA
(PMID:14569596)
GO_REF:0000107
RGD
Ensembl
PMID:14569596 GO_REF:0000107 NCBI chr 5:153,568,937...153,625,669
Ensembl chr 5:153,568,745...153,625,869
JBrowse link
G Clrn1 clarin 1 ISO
IEA
(PMID:19423712)
GO_REF:0000107
RGD
Ensembl
PMID:19423712 GO_REF:0000107 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase IDA RGD PMID:16876328 RGD:6483359 NCBI chr10:88,490,798...88,497,357
Ensembl chr10:88,490,798...88,497,356
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO
IDA
(MGI:MGI:3690408|PMID:16885194) RGD PMID:16885194, PMID:25878282 MGI:MGI:3690408, RGD:13451131 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Ctsl cathepsin L IDA RGD PMID:15085256 RGD:2315617 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase ISO (MGI:MGI:2179664|PMID:11882650) RGD PMID:11882650 MGI:MGI:2179664 NCBI chr10:109,906,119...109,909,696
Ensembl chr10:109,906,815...109,909,715
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 IDA PMID:19587293 MGI PMID:19587293 RGD:10400858 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 IEA
ISO
GO_REF:0000107
(PMID:12671034)
Ensembl
RGD
PMID:12671034 GO_REF:0000107 NCBI chr10:108,095,131...108,099,483
Ensembl chr10:108,095,131...108,099,483
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 IDA RGD PMID:15800203 RGD:1582139 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Espn espin IDA
IEA
ISO
PMID:16413524
GO_REF:0000107
(PMID:29572253)
Ensembl
RGD
PMID:29572253, PMID:16413524 GO_REF:0000107, RGD:8554030 NCBI chr 5:169,293,356...169,331,338
Ensembl chr 5:169,293,904...169,331,163
JBrowse link
G Exoc4 exocyst complex component 4 ISO
IEA
(MGI:MGI:4352761|PMID:19587293)
GO_REF:0000107
RGD
Ensembl
PMID:19587293 GO_REF:0000107, MGI:MGI:4352761 NCBI chr 4:60,549,128...61,358,305
Ensembl chr 4:60,549,197...61,355,994
JBrowse link
G Ezr ezrin ISO (PMID:12082081)
(MGI:MGI:3695521|PMID:17138661), (MGI:MGI:4457791|PMID:20551175), (MGI:MGI:5484953|PMID:23284756), (MGI:MGI:6115186|PMID:9472040)
RGD PMID:9472040, PMID:12082081, PMID:17138661, PMID:20551175, PMID:23284756 MGI:MGI:3695521, MGI:MGI:4457791, MGI:MGI:5484953, MGI:MGI:6115186 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Fabp2 fatty acid binding protein 2 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 2:227,080,912...227,083,654
Ensembl chr 2:227,080,924...227,083,501
JBrowse link
G Fmn2 formin 2 ISO (MGI:MGI:5476853|PMID:23439682) RGD PMID:23439682 MGI:MGI:5476853 NCBI chr13:92,569,256...92,887,302 JBrowse link
G Foxa1 forkhead box A1 ISO
IEA
(MGI:MGI:5471906|PMID:23266329)
GO_REF:0000107
RGD
Ensembl
PMID:23266329 GO_REF:0000107, MGI:MGI:5471906 NCBI chr 6:78,516,579...78,549,669
Ensembl chr 6:78,545,804...78,549,669
JBrowse link
G Fscn1 fascin actin-bundling protein 1 IDA
IBA
ISO
PMID:21873635
(PMID:9571235)
RGD PMID:9571235, PMID:18855019, PMID:21873635 RGD:2317768, RGD:13792537 NCBI chr12:13,655,459...13,668,595
Ensembl chr12:13,656,554...13,668,515
JBrowse link
G Fscn3 fascin actin-bundling protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:55,719,976...55,729,442
Ensembl chr 4:55,720,010...55,729,457
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO
IBA
(MGI:MGI:5635346|PMID:24619944)
PMID:21873635
(PMID:24619944)
RGD PMID:24619944, PMID:21873635 MGI:MGI:5635346, RGD:13792537 NCBI chr18:36,308,925...36,334,643
Ensembl chr18:36,308,925...36,322,320
JBrowse link
G Hyal2 hyaluronidase 2 ISO
ISS
IEA
(PMID:19366691)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19366691 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:116,324,062...116,328,978
Ensembl chr 8:116,324,040...116,328,978
JBrowse link
G Icam2 intercellular adhesion molecule 2 ISO (MGI:MGI:6115186|PMID:9472040) RGD PMID:9472040 MGI:MGI:6115186 NCBI chr10:94,569,889...94,581,218
Ensembl chr10:94,569,890...94,576,512
JBrowse link
G Ift20 intraflagellar transport 20 ISO (MGI:MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:MGI:5615303 NCBI chr10:65,805,808...65,811,353
Ensembl chr10:65,805,860...65,811,351
JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 ISO (MGI:MGI:3835718|PMID:18604197) RGD PMID:18604197 MGI:MGI:3835718 NCBI chr 2:26,161,628...26,439,067
Ensembl chr 2:26,167,199...26,438,790
JBrowse link
G Jam3 junctional adhesion molecule 3 ISO (PMID:19060272) RGD PMID:19060272 NCBI chr 8:28,147,110...28,208,466
Ensembl chr 8:28,147,111...28,208,466
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IDA RGD PMID:20466875 RGD:2326033 NCBI chr13:90,722,945...90,753,338
Ensembl chr13:90,723,092...90,752,581
JBrowse link
G Kif13b kinesin family member 13B IDA PMID:19587293 MGI PMID:19587293 RGD:10400858 NCBI chr15:48,030,837...48,192,932
Ensembl chr15:48,030,973...48,189,951
JBrowse link
G Lipc lipase C, hepatic type IDA liver parenchymal cells RGD PMID:9020876 RGD:1600641 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Lyz2 lysozyme 2 IDA RGD PMID:9208328 RGD:1599861 NCBI chr 7:60,335,968...60,341,264
Ensembl chr 7:60,335,969...60,341,264
JBrowse link
G Msn moesin ISO
IEA
ISS
(PMID:12082081)
(MGI:MGI:6115186|PMID:9472040)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9472040, PMID:12082081 GO_REF:0000024, GO_REF:0000107, MGI:MGI:6115186 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Muc3 mucin 3, intestinal ISO (MGI:MGI:5543983|PMID:23784542) RGD PMID:23784542 MGI:MGI:5543983 NCBI chr12:22,535,663...22,584,775 JBrowse link
G Myo1a myosin IA ISO
IBA
ISS
IEA
(MGI:MGI:1329200|PMID:9933937)
PMID:21873635
GO_REF:0000024
(PMID:9858156)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:9858156, PMID:9933937, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1329200, RGD:13792537 NCBI chr 7:71,000,299...71,019,386
Ensembl chr 7:71,004,417...71,019,372
JBrowse link
G Myo1b myosin Ib IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:54,706,005...54,766,054
Ensembl chr 9:54,558,202...54,766,054
JBrowse link
G Myo1c myosin 1C ISO
IBA
(PMID:9858156)
PMID:21873635
RGD PMID:9858156, PMID:21873635 RGD:13792537 NCBI chr10:63,803,311...63,819,614
Ensembl chr10:63,803,309...63,819,614
JBrowse link
G Myo1d myosin ID IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:67,866,939...68,142,864
Ensembl chr10:67,866,940...68,142,864
JBrowse link
G Myo1e myosin IE IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,644,715...76,840,240
Ensembl chr 8:76,754,492...76,839,593
JBrowse link
G Myo1f myosin IF IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:18,440,742...18,491,448
Ensembl chr 7:18,440,742...18,491,448
JBrowse link
G Myo1g myosin IG ISO
IBA
(MGI:MGI:5566942|PMID:24310084)
PMID:21873635
RGD PMID:24310084, PMID:21873635 MGI:MGI:5566942, RGD:13792537 NCBI chr14:86,781,243...86,796,393
Ensembl chr14:86,781,202...86,796,378
JBrowse link
G Myo6 myosin VI IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:18653479, PMID:21873635 RGD:2314961, RGD:13792537 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Myo7a myosin VIIA IDA
IBA
PMID:7568224
PMID:21873635
MGI
GO_Central
PMID:7568224, PMID:21873635 RGD:8553891, RGD:13792537 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Myo7b myosin VIIb ISO
IBA
(PMID:24725409)
PMID:21873635
(MGI:MGI:5578666|PMID:24725409)
RGD PMID:24725409, PMID:21873635 MGI:MGI:5578666, RGD:13792537 NCBI chr18:24,742,329...24,823,889
Ensembl chr18:24,742,329...24,823,858
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase IDA RGD PMID:9227416 RGD:1642067 NCBI chr 8:79,323,408...79,408,842
Ensembl chr 8:79,323,408...79,408,833
JBrowse link
G Oxtr oxytocin receptor IDA RGD PMID:11456414 RGD:2304235 NCBI chr 4:144,399,326...144,417,598
Ensembl chr 4:144,403,358...144,416,116
JBrowse link
G Pdgfa platelet derived growth factor subunit A ISO
ISS
(MGI:MGI:2183884|PMID:12101409)
GO_REF:0000024
RGD
UniProt
PMID:12101409 GO_REF:0000024, MGI:MGI:2183884 NCBI chr12:17,734,141...17,756,186
Ensembl chr12:17,734,133...17,755,285
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO
IEA
(MGI:MGI:5471906|PMID:23266329)
GO_REF:0000107
RGD
Ensembl
PMID:23266329 GO_REF:0000107, MGI:MGI:5471906 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Podxl podocalyxin-like IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:58,829,049...58,893,353
Ensembl chr 4:58,829,060...58,893,170
JBrowse link
G Prom1 prominin 1 ISO
IBA
(MGI:MGI:1099557|PMID:9356465), (MGI:MGI:3584059|PMID:15976444)
PMID:21873635
RGD PMID:9356465, PMID:15976444, PMID:21873635 MGI:MGI:1099557, MGI:MGI:3584059, RGD:13792537 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
G Prom2 prominin 2 IDA
IBA
PMID:17109118
PMID:21873635
UniProt
GO_Central
PMID:17109118, PMID:21873635 RGD:8554554, RGD:13792537 NCBI chr 3:120,087,633...120,107,495
Ensembl chr 3:120,092,582...120,106,697
JBrowse link
G Ptprh protein tyrosine phosphatase, receptor type, H ISO (MGI:MGI:3838699|PMID:19170756), (MGI:MGI:5695712|PMID:26195794) RGD PMID:19170756, PMID:26195794 MGI:MGI:3838699, MGI:MGI:5695712 NCBI chr 1:72,809,935...72,859,161
Ensembl chr 1:72,810,545...72,859,161
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IDA
IEA
ISO
PMID:21047789
GO_REF:0000107
(PMID:21047789)
Ensembl
RGD
PMID:21047789, PMID:21047789 GO_REF:0000107, RGD:10054076 NCBI chr 7:139,232,263...139,254,668
Ensembl chr 7:139,232,251...139,254,551
JBrowse link
G Rdx radixin IDA
ISO
(MGI:MGI:2181857|PMID:12068294), (MGI:MGI:3039970|PMID:15093731), (MGI:MGI:5645204|PMID:21047789), (MGI:MGI:6115186|PMID:9472040) RGD PMID:9472040, PMID:12068294, PMID:15093731, PMID:21047789, PMID:11438984 MGI:MGI:2181857, MGI:MGI:3039970, MGI:MGI:5645204, MGI:MGI:6115186, RGD:2316843 NCBI chr 8:56,570,728...56,612,851
Ensembl chr 8:56,585,396...56,610,612
JBrowse link
G Slc10a2 solute carrier family 10 member 2 ISO
IEA
(MGI:MGI:5499673|PMID:23200860)
GO_REF:0000107
RGD
Ensembl
PMID:23200860 GO_REF:0000107, MGI:MGI:5499673 NCBI chr16:90,324,420...90,350,254
Ensembl chr16:90,324,361...90,345,865
JBrowse link
G Slc27a4 solute carrier family 27 member 4 ISO
IBA
(MGI:MGI:1345773|PMID:10518211)
PMID:21873635
RGD PMID:10518211, PMID:21873635 MGI:MGI:1345773, RGD:13792537 NCBI chr 3:8,363,937...8,376,858
Ensembl chr 3:8,363,937...8,376,858
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (PMID:17242191) RGD PMID:17242191 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Spn sialophorin IDA PMID:9472040 RGD
UniProt
PMID:8421057, PMID:9472040 RGD:2306196, RGD:13506275 NCBI chr 1:198,572,999...198,585,664
Ensembl chr 1:198,572,999...198,577,226
JBrowse link
G Stard10 StAR-related lipid transfer domain containing 10 ISO
IBA
(MGI:MGI:5499673|PMID:23200860)
PMID:21873635
RGD PMID:23200860, PMID:21873635 MGI:MGI:5499673, RGD:13792537 NCBI chr 1:166,428,780...166,458,413
Ensembl chr 1:166,428,761...166,457,509
JBrowse link
G Tek TEK receptor tyrosine kinase ISO (PMID:19424712) RGD PMID:19424712 NCBI chr 5:113,725,717...113,852,799
Ensembl chr 5:113,725,717...113,852,799
JBrowse link
G Tgfb1 transforming growth factor, beta 1 colocalizes_with ISO
ISS
(PMID:19366691)
GO_REF:0000024
RGD
UniProt
PMID:19366691 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Ush1c USH1 protein network component harmonin ISO (PMID:24725409)
(MGI:MGI:5578666|PMID:24725409)
RGD PMID:24725409 MGI:MGI:5578666 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO (PMID:12082081) RGD PMID:12082081 NCBI chr 2:219,071,193...219,090,931
Ensembl chr 2:219,071,193...219,097,619
JBrowse link
G Vil1 villin 1 ISO (MGI:MGI:5013879|PMID:21606356)
(PMID:17182858)
RGD PMID:17182858, PMID:21606356 MGI:MGI:5013879 NCBI chr 9:81,689,802...81,717,623
Ensembl chr 9:81,689,802...81,717,621
JBrowse link
G Wwox WW domain-containing oxidoreductase colocalizes_with ISO (PMID:19366691) RGD PMID:19366691 NCBI chr19:46,761,353...47,695,247 JBrowse link
microvillus membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy6 adenylate cyclase 6 IDA RGD PMID:10866989 RGD:2312678 NCBI chr 7:140,270,678...140,291,722
Ensembl chr 7:140,270,692...140,291,620
JBrowse link
G Cd24 CD24 molecule ISO (MGI:MGI:2178911|PMID:11978835) RGD PMID:11978835 MGI:MGI:2178911 NCBI chr20:48,335,540...48,340,847
Ensembl chr20:48,335,540...48,340,846
JBrowse link
G Cdhr2 cadherin-related family member 2 ISO (PMID:12117771), (PMID:24725409) RGD PMID:12117771, PMID:24725409 NCBI chr17:10,415,044...10,450,589
Ensembl chr17:10,415,123...10,439,691
JBrowse link
G Cdhr5 cadherin-related family member 5 ISO
ISS
(PMID:24725409)
GO_REF:0000024
RGD
UniProt
PMID:24725409 GO_REF:0000024 NCBI chr 1:214,255,118...214,263,848
Ensembl chr 1:214,255,110...214,263,581
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 1:82,327,955...82,344,345
Ensembl chr 1:82,327,955...82,344,345
JBrowse link
G Ceacam20 CEA cell adhesion molecule 20 ISO (MGI:MGI:5695712|PMID:26195794), (MGI:MGI:5823556|PMID:25908210) RGD PMID:25908210, PMID:26195794 MGI:MGI:5695712, MGI:MGI:5823556 NCBI chr 1:80,880,856...80,912,082
Ensembl chr 1:80,880,856...80,912,082
JBrowse link
G Ctnnb1 catenin beta 1 ISO
IEA
(MGI:MGI:3617131|PMID:16439479)
GO_REF:0000107
RGD
Ensembl
PMID:16439479 GO_REF:0000107, MGI:MGI:3617131 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Dpep1 dipeptidase 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr19:55,973,447...55,998,830
Ensembl chr19:55,982,740...55,998,208
JBrowse link
G Ezr ezrin IDA PMID:11726633 UniProt PMID:11726633 RGD:8554011 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Hfe homeostatic iron regulator NOT IDA RGD PMID:16208485 RGD:1582698 NCBI chr17:43,661,276...43,669,327
Ensembl chr17:43,661,222...43,669,985
JBrowse link
G Itgav integrin subunit alpha V ISO (PMID:25063885) RGD PMID:25063885 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgb3 integrin subunit beta 3 ISO (PMID:25063885) RGD PMID:25063885 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Msn moesin IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr  X:65,226,834...65,294,192
Ensembl chr  X:65,226,748...65,295,810
JBrowse link
G Mttp microsomal triglyceride transfer protein IDA RGD PMID:15383310 RGD:1582565 NCBI chr 2:243,366,181...243,407,608
Ensembl chr 2:243,366,181...243,407,608
JBrowse link
G Muc4 mucin 4, cell surface associated IDA RGD PMID:2674161 RGD:2303756 NCBI chr11:71,242,973...71,285,217
Ensembl chr11:71,243,334...71,284,939
JBrowse link
G Pdpn podoplanin ISO
ISS
(PMID:17046996)
GO_REF:0000024
RGD
UniProt
PMID:17046996 GO_REF:0000024 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Pdzk1 PDZ domain containing 1 IDA RGD PMID:22904329 RGD:7207458 NCBI chr 2:198,965,685...198,999,323
Ensembl chr 2:198,965,685...198,999,323
JBrowse link
G Podxl podocalyxin-like ISO
IBA
ISS
(MGI:MGI:4456941|PMID:17311105)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:17311105, PMID:21873635 GO_REF:0000024, MGI:MGI:4456941, RGD:13792537 NCBI chr 4:58,829,049...58,893,353
Ensembl chr 4:58,829,060...58,893,170
JBrowse link
G Prom1 prominin 1 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
G Prom2 prominin 2 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 3:120,087,633...120,107,495
Ensembl chr 3:120,092,582...120,106,697
JBrowse link
G Scarb1 scavenger receptor class B, member 1 IDA RGD PMID:14657200 RGD:1580003 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Slc26a2 solute carrier family 26 member 2 IDA RGD PMID:20369363 RGD:13208865 NCBI chr18:56,518,999...56,534,539
Ensembl chr18:56,520,740...56,534,415
JBrowse link
G Slc34a2 solute carrier family 34 member 2 IDA RGD PMID:22904329 RGD:7207458 NCBI chr14:60,257,211...60,276,516
Ensembl chr14:60,256,712...60,276,794
JBrowse link
G Slc6a6 solute carrier family 6 member 6 ISO (PMID:15166008) RGD PMID:15166008 NCBI chr 4:123,638,619...123,713,469
Ensembl chr 4:123,642,210...123,713,464
JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO
IEA
(PMID:26050671)
GO_REF:0000107
RGD
Ensembl
PMID:26050671 GO_REF:0000107 NCBI chr19:54,693,959...54,722,563
Ensembl chr19:54,693,959...54,722,563
JBrowse link
G Slc7a8 solute carrier family 7 member 8 ISO
IEA
(PMID:26050671)
GO_REF:0000107
RGD
Ensembl
PMID:26050671 GO_REF:0000107 NCBI chr15:33,369,245...33,428,942
Ensembl chr15:33,369,216...33,428,973
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 IDA PMID:11726633 RGD
UniProt
PMID:22904329, PMID:11726633 RGD:7207458, RGD:8554011 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
Schwann cell microvillus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B IDA RGD PMID:1650113 RGD:8548783 NCBI chr 4:61,706,866...61,720,959
Ensembl chr 4:61,706,864...61,720,956
JBrowse link
G Ezr ezrin IDA RGD PMID:17045809 RGD:7207801 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G Nfasc neurofascin IDA RGD PMID:17045809 RGD:7207801 NCBI chr13:49,335,407...49,522,474
Ensembl chr13:49,335,408...49,522,415
JBrowse link
stereocilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy6 adenylate cyclase 6 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:140,270,678...140,291,722
Ensembl chr 7:140,270,692...140,291,620
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 IDA
ISO
(MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646, PMID:16301216 MGI:MGI:5766107, RGD:8548636 NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134
JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 ISO (MGI:MGI:3849653|PMID:19478059) RGD PMID:19478059 MGI:MGI:3849653 NCBI chr18:60,013,388...60,152,920
Ensembl chr18:60,013,382...60,095,354
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO (MGI:MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:MGI:5615303 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Calb1 calbindin 1 IDA RGD PMID:16120789 RGD:7175527 NCBI chr 5:29,538,380...29,562,774
Ensembl chr 5:29,538,380...29,562,773
JBrowse link
G Calb2 calbindin 2 IDA RGD PMID:16120789 RGD:7175527 NCBI chr19:41,482,743...41,509,617
Ensembl chr19:41,482,728...41,509,658
JBrowse link
G Cdh23 cadherin-related 23 IEA
ISO
GO_REF:0000002
(MGI:MGI:2447265|PMID:12485990), (MGI:MGI:3577782|PMID:15882574), (MGI:MGI:3616414|PMID:16481439), (MGI:MGI:3686545|PMID:17050716)
InterPro
RGD
PMID:12485990, PMID:15882574, PMID:16481439, PMID:17050716 GO_REF:0000002, MGI:MGI:2447265, MGI:MGI:3577782, MGI:MGI:3616414, MGI:MGI:3686545 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Cib2 calcium and integrin binding family member 2 ISO
ISS
(MGI:MGI:5487486|PMID:23023331)
(PMID:26173970), (PMID:26426422)
GO_REF:0000024
RGD
UniProt
PMID:23023331, PMID:26173970, PMID:26426422 GO_REF:0000024, MGI:MGI:5487486 NCBI chr 8:59,123,078...59,139,946
Ensembl chr 8:59,123,079...59,139,946
JBrowse link
G Clic5 chloride intracellular channel 5 ISO (MGI:MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:MGI:3663248 NCBI chr 9:19,121,676...19,372,673
Ensembl chr 9:19,121,677...19,372,673
JBrowse link
G Clrn1 clarin 1 ISO
IEA
(MGI:MGI:4353969|PMID:19539019)
GO_REF:0000107
RGD
Ensembl
PMID:19539019 GO_REF:0000107, MGI:MGI:4353969 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Dock4 dedicator of cytokinesis 4 ISO (MGI:MGI:3640027|PMID:16464467) RGD PMID:16464467 MGI:MGI:3640027 NCBI chr 6:60,374,839...60,782,648
Ensembl chr 6:60,566,196...60,782,556
JBrowse link
G Elmod3 ELMO domain containing 3 IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 4:100,422,256...100,465,152
Ensembl chr 4:100,422,252...100,465,112
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 ISS
ISO
GO_REF:0000024
(MGI:MGI:5000171|PMID:21236676), (MGI:MGI:5607381|PMID:24741995)
UniProt
RGD
PMID:21236676, PMID:24741995 GO_REF:0000024, MGI:MGI:5000171, MGI:MGI:5607381 NCBI chr 4:171,475,155...171,645,620
Ensembl chr 4:171,475,567...171,591,882
JBrowse link
G Espn espin ISO (MGI:MGI:4881391|PMID:20510926)
(PMID:29572253)
RGD PMID:20510926, PMID:29572253 MGI:MGI:4881391 NCBI chr 5:169,293,356...169,331,338
Ensembl chr 5:169,293,904...169,331,163
JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal ISO (MGI:MGI:4820459|PMID:20660251) RGD PMID:20660251 MGI:MGI:4820459 NCBI chr10:109,528,307...109,540,675
Ensembl chr10:109,533,487...109,540,026
JBrowse link
G Grxcr1 glutaredoxin and cysteine rich domain containing 1 ISO
IBA
(MGI:MGI:4421424|PMID:20137774), (MGI:MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:20137774, PMID:30380417, PMID:21873635 MGI:MGI:4421424, MGI:MGI:6278501, RGD:13792537 NCBI chr14:41,663,688...41,787,331
Ensembl chr14:41,663,688...41,786,084
JBrowse link
G Ift20 intraflagellar transport 20 ISO (MGI:MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:MGI:5615303 NCBI chr10:65,805,808...65,811,353
Ensembl chr10:65,805,860...65,811,351
JBrowse link
G Loxhd1 lipoxygenase homology domains 1 ISO (MGI:MGI:4367644|PMID:19732867) RGD PMID:19732867 MGI:MGI:4367644 NCBI chr18:73,645,365...73,812,271
Ensembl chr18:73,645,907...73,812,271
JBrowse link
G Myo15a myosin XVA ISO (MGI:MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:MGI:4430014 NCBI chr10:46,840,098...46,897,362
Ensembl chr10:46,840,113...46,896,054
JBrowse link
G Myo1c myosin 1C ISO (MGI:MGI:3686545|PMID:17050716) RGD PMID:17050716 MGI:MGI:3686545 NCBI chr10:63,803,311...63,819,614
Ensembl chr10:63,803,309...63,819,614
JBrowse link
G Myo7a myosin VIIA ISO (MGI:MGI:2447265|PMID:12485990), (MGI:MGI:3616414|PMID:16481439), (MGI:MGI:4430014|PMID:20016102), (MGI:MGI:5766107|PMID:26754646), (MGI:MGI:5806014|PMID:27525485) RGD PMID:12485990, PMID:16481439, PMID:20016102, PMID:26754646, PMID:27525485 MGI:MGI:2447265, MGI:MGI:3616414, MGI:MGI:4430014, MGI:MGI:5766107, MGI:MGI:5806014 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Ocm oncomodulin IDA RGD PMID:16120789 RGD:7175527 NCBI chr12:12,611,121...12,634,472
Ensembl chr12:12,624,723...12,634,472
JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 ISO (MGI:MGI:5477842|PMID:23533177) RGD PMID:23533177 MGI:MGI:5477842 NCBI chr10:61,456,144...61,577,412
Ensembl chr10:61,456,145...61,577,412
JBrowse link
G Pcdh15 protocadherin related 15 ISO (MGI:MGI:3722521|PMID:14570705), (MGI:MGI:5766107|PMID:26754646) RGD PMID:14570705, PMID:26754646 MGI:MGI:3722521, MGI:MGI:5766107 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pdzd7 PDZ domain containing 7 ISO
IBA
(MGI:MGI:5806014|PMID:27525485)
PMID:21873635
RGD PMID:27525485, PMID:21873635 MGI:MGI:5806014, RGD:13792537 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Pls1 plastin 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:5608770|PMID:25124451)
Ensembl
RGD
PMID:25124451 GO_REF:0000107, MGI:MGI:5608770 NCBI chr 8:103,557,361...103,659,625
Ensembl chr 8:103,557,364...103,608,913
JBrowse link
G Pls3 plastin 3 IDA RGD PMID:12378542 RGD:731234 NCBI chr  X:119,030,311...119,124,268
Ensembl chr  X:119,030,419...119,124,250
JBrowse link
G Prom1 prominin 1 ISO (MGI:MGI:3051924|PMID:15316084) RGD PMID:15316084 MGI:MGI:3051924 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
G Pvalb parvalbumin IDA RGD PMID:16120789 RGD:7175527 NCBI chr 7:119,428,657...119,443,674
Ensembl chr 7:119,429,019...119,441,487
JBrowse link
G Rdx radixin ISO (MGI:MGI:3663248|PMID:17021174) RGD PMID:17021174 MGI:MGI:3663248 NCBI chr 8:56,570,728...56,612,851
Ensembl chr 8:56,585,396...56,610,612
JBrowse link
G Rhoc ras homolog family member C ISO (MGI:MGI:5789047|PMID:27269051) RGD PMID:27269051 MGI:MGI:5789047 NCBI chr 2:207,271,692...207,278,010
Ensembl chr 2:207,271,853...207,279,314
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 IDA
ISO
PMID:24958875
(MGI:MGI:5789047|PMID:27269051)
RGD PMID:27269051, PMID:24958875 MGI:MGI:5789047, RGD:10047244 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Slc4a7 solute carrier family 4 member 7 IDA RGD PMID:16301216 RGD:8548636 NCBI chr15:11,832,611...11,912,923
Ensembl chr15:11,836,286...11,912,916
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (MGI:MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:MGI:5578076 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Slc9a3r2 SLC9A3 regulator 2 ISO (MGI:MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:MGI:5578076 NCBI chr10:14,003,330...14,015,066
Ensembl chr10:14,003,320...14,013,870
JBrowse link
G Tprn taperin ISS
ISO
GO_REF:0000024
(MGI:MGI:4440409|PMID:20170899), (MGI:MGI:5789047|PMID:27269051)
UniProt
RGD
PMID:20170899, PMID:27269051 GO_REF:0000024, MGI:MGI:4440409, MGI:MGI:5789047 NCBI chr 3:2,480,232...2,487,710
Ensembl chr 3:2,480,232...2,487,710
JBrowse link
G Triobp TRIO and F-actin binding protein ISO (MGI:MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:MGI:4881391 NCBI chr 7:120,173,892...120,237,145
Ensembl chr 7:120,176,530...120,230,420
JBrowse link
G Tspear thrombospondin-type laminin G domain and EAR repeats ISO (MGI:MGI:5430693|PMID:22678063) RGD PMID:22678063 MGI:MGI:5430693 NCBI chr20:11,501,510...11,529,210
Ensembl chr20:11,501,925...11,528,332
JBrowse link
G Twf2 twinfilin actin-binding protein 2 ISO (MGI:MGI:5285166|PMID:19955359) RGD PMID:19955359 MGI:MGI:5285166 NCBI chr 8:114,897,011...114,909,531
Ensembl chr 8:114,897,011...114,909,531
JBrowse link
G Ush1c USH1 protein network component harmonin IDA
IBA
ISO
PMID:21873635
(MGI:MGI:2447265|PMID:12485990), (MGI:MGI:4430014|PMID:20016102), (MGI:MGI:5766107|PMID:26754646)
RGD PMID:12485990, PMID:20016102, PMID:26754646, PMID:16301216, PMID:21873635 MGI:MGI:2447265, MGI:MGI:4430014, MGI:MGI:5766107, RGD:8548636, RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Ush2a usherin NOT IDA
ISO
hair cell
(MGI:MGI:5430895|PMID:16301217)
RGD PMID:16301217, PMID:16301216 MGI:MGI:5430895, RGD:8548636 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329
JBrowse link
G Whrn whirlin IDA
IBA
ISO
ISS
PMID:21873635
(MGI:MGI:3528095|PMID:15590699), (MGI:MGI:3528099|PMID:15590698), (MGI:MGI:3606745|PMID:15654330)
GO_REF:0000024
RGD
UniProt
PMID:15590698, PMID:15590699, PMID:15654330, PMID:16434480, PMID:21873635 GO_REF:0000024, MGI:MGI:3528095, MGI:MGI:3528099, MGI:MGI:3606745, RGD:1600128, RGD:13792537 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link
G Zswim6 zinc finger, SWIM-type containing 6 ISO (MGI:MGI:5755785|PMID:25105228) RGD PMID:25105228 MGI:MGI:5755785 NCBI chr 2:38,978,042...39,042,886
Ensembl chr 2:38,979,865...39,007,976
JBrowse link
stereocilium base term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO
IBA
(MGI:MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:30380417, PMID:21873635 MGI:MGI:6278501, RGD:13792537 NCBI chr18:36,308,925...36,334,643
Ensembl chr18:36,308,925...36,322,320
JBrowse link
G Myo7a myosin VIIA ISO (MGI:MGI:3714249|PMID:17567809) RGD PMID:17567809 MGI:MGI:3714249 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508
JBrowse link
G Pjvk pejvakin ISO
IEA
(MGI:MGI:5887150|PMID:28209736)
GO_REF:0000107
RGD
Ensembl
PMID:28209736 GO_REF:0000107, MGI:MGI:5887150 NCBI chr 3:63,508,386...63,518,163
Ensembl chr 3:63,510,293...63,518,147
JBrowse link
G Tprn taperin ISO (MGI:MGI:5887150|PMID:28209736), (MGI:MGI:6278501|PMID:30380417) RGD PMID:28209736, PMID:30380417 MGI:MGI:5887150, MGI:MGI:6278501 NCBI chr 3:2,480,232...2,487,710
Ensembl chr 3:2,480,232...2,487,710
JBrowse link
G Triobp TRIO and F-actin binding protein ISO (MGI:MGI:4881391|PMID:20510926), (MGI:MGI:5887150|PMID:28209736) RGD PMID:20510926, PMID:28209736 MGI:MGI:4881391, MGI:MGI:5887150 NCBI chr 7:120,173,892...120,237,145
Ensembl chr 7:120,176,530...120,230,420
JBrowse link
stereocilium membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1b calcium voltage-gated channel subunit alpha1 B ISO RGD RGD:11556226 NCBI chr 3:1,740,026...1,924,959
Ensembl chr 3:1,740,024...1,924,827
JBrowse link
G Myo1c myosin 1C IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr10:63,803,311...63,819,614
Ensembl chr10:63,803,309...63,819,614
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 IDA PMID:24958875 UniProt PMID:24958875 RGD:10047244 NCBI chr17:42,324,594...42,549,907
Ensembl chr17:42,324,594...42,422,053
JBrowse link
G Ush2a usherin ISO (MGI:MGI:5430895|PMID:16301217) RGD PMID:16301217 MGI:MGI:5430895 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329
JBrowse link
G Vezt vezatin, adherens junctions transmembrane protein IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 7:34,888,487...34,951,712
Ensembl chr 7:34,888,491...34,951,644
JBrowse link
stereocilium shaft term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fchsd2 FCH and double SH3 domains 2 ISO (MGI:MGI:6233193|PMID:23437151) RGD PMID:23437151 MGI:MGI:6233193 NCBI chr 1:166,140,025...166,395,915
Ensembl chr 1:166,125,474...166,395,915
JBrowse link
G Grxcr2 glutaredoxin and cysteine rich domain containing 2 ISO
IBA
(MGI:MGI:6278501|PMID:30380417)
PMID:21873635
RGD PMID:30380417, PMID:21873635 MGI:MGI:6278501, RGD:13792537 NCBI chr18:36,308,925...36,334,643
Ensembl chr18:36,308,925...36,322,320
JBrowse link
G Triobp TRIO and F-actin binding protein ISO (MGI:MGI:4881391|PMID:20510926) RGD PMID:20510926 MGI:MGI:4881391 NCBI chr 7:120,173,892...120,237,145
Ensembl chr 7:120,176,530...120,230,420
JBrowse link
stereocilium tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc14a cell division cycle 14A ISO (MGI:MGI:6118860|PMID:29293958) RGD PMID:29293958 MGI:MGI:6118860 NCBI chr 2:219,302,577...219,458,345
Ensembl chr 2:219,302,577...219,458,271
JBrowse link
G Cdh23 cadherin-related 23 ISO (MGI:MGI:2447265|PMID:12485990), (MGI:MGI:3686545|PMID:17050716), (MGI:MGI:5578076|PMID:24920589) RGD PMID:12485990, PMID:17050716, PMID:24920589 MGI:MGI:2447265, MGI:MGI:3686545, MGI:MGI:5578076 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component ISO
IBA
ISS
IEA
(MGI:MGI:4947458|PMID:21368133)
PMID:21873635
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:21368133, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:4947458, RGD:13792537 NCBI chr 1:80,773,819...80,783,898
Ensembl chr 1:80,773,819...80,783,898
JBrowse link
G Coro1a coronin 1A ISO (MGI:MGI:5766107|PMID:26754646) RGD PMID:26754646 MGI:MGI:5766107 NCBI chr 1:198,123,883...198,128,890
Ensembl chr 1:198,123,884...198,128,857
JBrowse link
G Eps8 epidermal growth factor receptor pathway substrate 8 ISO (MGI:MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:MGI:5509070 NCBI chr 4:171,475,155...171,645,620
Ensembl chr 4:171,475,567...171,591,882
JBrowse link
G Eps8l2 EPS8-like 2 ISO (MGI:MGI:5509070|PMID:23918390) RGD PMID:23918390 MGI:MGI:5509070 NCBI chr 1:214,327,992...214,353,466
Ensembl chr 1:214,328,071...214,353,461
JBrowse link
G Espn espin IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:5315207|PMID:22264607), (MGI:MGI:5766107|PMID:26754646)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22264607, PMID:26754646 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5315207, MGI:MGI:5766107 NCBI chr 5:169,293,356...169,331,338
Ensembl chr 5:169,293,904...169,331,163
JBrowse link
G Espnl espin-like ISO (MGI:MGI:5766107|PMID:26754646), (MGI:MGI:5805759|PMID:26926603) RGD PMID:26754646, PMID:26926603 MGI:MGI:5766107, MGI:MGI:5805759 NCBI chr 9:98,459,175...98,484,930
Ensembl chr 9:98,460,177...98,483,419
JBrowse link
G Homer2 homer scaffold protein 2 ISO
ISS
(MGI:MGI:5688813|PMID:25816005)
GO_REF:0000024
RGD
UniProt
PMID:25816005 GO_REF:0000024, MGI:MGI:5688813 NCBI chr 1:143,443,300...143,535,579
Ensembl chr 1:143,443,300...143,535,583
JBrowse link
G Lhfpl5 LHFPL tetraspan subfamily member 5 ISO (MGI:MGI:5468200|PMID:23217710) RGD PMID:23217710 MGI:MGI:5468200 NCBI chr20:5,815,837...5,826,137
Ensembl chr20:5,815,837...5,826,137
JBrowse link
G Morn4 MORN repeat containing 4 ISO
ISS
(MGI:MGI:5766107|PMID:26754646)
GO_REF:0000024
RGD
UniProt
PMID:26754646 GO_REF:0000024, MGI:MGI:5766107 NCBI chr 1:261,323,079...261,333,383
Ensembl chr 1:261,323,083...261,333,383
JBrowse link
G Myo3a myosin IIIA ISO (MGI:MGI:4849846|PMID:21165622), (MGI:MGI:5315207|PMID:22264607), (MGI:MGI:5766107|PMID:26754646) RGD PMID:21165622, PMID:22264607, PMID:26754646 MGI:MGI:4849846, MGI:MGI:5315207, MGI:MGI:5766107 NCBI chr17:88,952,635...89,167,538
Ensembl chr17:88,963,981...89,167,018
JBrowse link
G Myo3b myosin IIIB ISO (MGI:MGI:5315207|PMID:22264607), (MGI:MGI:5766107|PMID:26754646) RGD PMID:22264607, PMID:26754646 MGI:MGI:5315207, MGI:MGI:5766107 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547
JBrowse link
G Pdzd7 PDZ domain containing 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938
JBrowse link
G Pkhd1l1 PKHD1 like 1 ISO (MGI:MGI:6358987|PMID:31444330) RGD PMID:31444330 MGI:MGI:6358987 NCBI chr 7:83,373,022...83,548,944
Ensembl chr 7:83,373,022...83,545,540
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 ISO (MGI:MGI:5578076|PMID:24920589) RGD PMID:24920589 MGI:MGI:5578076 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
G Strc stereocilin ISO
IBA
(MGI:MGI:3818235|PMID:18849963), (MGI:MGI:5430850|PMID:21165971), (MGI:MGI:5578076|PMID:24920589)
PMID:21873635
RGD PMID:18849963, PMID:21165971, PMID:24920589, PMID:21873635 MGI:MGI:3818235, MGI:MGI:5430850, MGI:MGI:5578076, RGD:13792537 NCBI chr 3:113,324,403...113,343,513
Ensembl chr 3:113,324,698...113,342,675
JBrowse link
G Tmc1 transmembrane channel-like 1 ISO (MGI:MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:MGI:5320864 NCBI chr 1:238,336,919...238,525,792
Ensembl chr 1:238,336,919...238,441,500
JBrowse link
G Tmc2 transmembrane channel-like 2 ISO (MGI:MGI:5320864|PMID:22105175) RGD PMID:22105175 MGI:MGI:5320864 NCBI chr 3:122,720,769...122,790,100
Ensembl chr 3:122,720,769...122,790,100
JBrowse link
G Ush1c USH1 protein network component harmonin IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Whrn whirlin ISO
IDA
IBA
IEA
(MGI:MGI:5565635|PMID:24334608)
PMID:23055499
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:24334608, PMID:23055499, PMID:21873635 GO_REF:0000107, MGI:MGI:5565635, RGD:13800540, RGD:13792537 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20609
    cellular anatomical entity 20358
      cell projection 2549
        plasma membrane bounded cell projection 2477
          actin-based cell projection 237
            actin filament bundle of actin-based cell projection + 0
            filopodium + 107
            microvillus + 103
            stereocilium + 62
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.