Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:extrinsic component of synaptic vesicle membrane
go back to main search page
Accession:GO:0098850 term browser browse the term
Definition:The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.


show annotations for term's descendants           Sort by:
extrinsic component of synaptic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amph amphiphysin is_active_in IDA PMID:1628617 SynGO PMID:1628617 RGD:13702221 NCBI chr17:50,435,018...50,678,583
Ensembl chr17:50,435,018...50,678,501 		JBrowse link
G Atm ATM serine/threonine kinase is_active_in ISO (PMID:27075534) RGD PMID:27075534 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:62,727,291...62,828,629 		JBrowse link
G Atp6v1a ATPase H+ transporting V1 subunit A is_active_in EXP
IDA
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr11:70,066,800...70,120,603
Ensembl chr11:70,035,134...70,120,603 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 is_active_in IDA
EXP
IEP 		PMID:23622064 SynGO PMID:23622064 PMID:23622064 PMID:23622064 RGD:13702180, RGD:13702180, RGD:13702180 NCBI chr 4:117,781,444...117,800,103
Ensembl chr 4:117,781,444...117,800,103 		JBrowse link
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 is_active_in IDA
EXP
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr16:25,384,254...25,408,388
Ensembl chr16:25,384,257...25,408,839 		JBrowse link
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 is_active_in EXP
IDA
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr 7:71,719,326...71,757,191
Ensembl chr 7:71,719,404...71,757,184 		JBrowse link
G Atp6v1d ATPase H+ transporting V1 subunit D is_active_in IDA
EXP
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr 6:103,389,778...103,405,346
Ensembl chr 6:103,389,783...103,405,346 		JBrowse link
G Atp6v1e1 ATPase H+ transporting V1 subunit E1 is_active_in EXP
IDA
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr 4:155,694,534...155,716,660
Ensembl chr 4:155,694,534...155,716,678 		JBrowse link
G Atp6v1f ATPase H+ transporting V1 subunit F is_active_in IDA
EXP
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr 4:59,033,020...59,035,980 JBrowse link
G Atp6v1g1 ATPase H+ transporting V1 subunit G1 is_active_in EXP
IDA
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr 5:81,976,959...81,983,139
Ensembl chr 5:81,977,015...81,985,930 		JBrowse link
G Atp6v1g2 ATPase H+ transporting V1 subunit G2 is_active_in EXP
IDA
IEP 		PMID:32165585 SynGO PMID:32165585 PMID:32165585 PMID:32165585 RGD:39458019, RGD:39458019, RGD:39458019 NCBI chr20:3,592,374...3,595,986
Ensembl chr20:3,592,364...3,595,475 		JBrowse link
G Atr ATR serine/threonine kinase is_active_in ISO (PMID:29279380) RGD PMID:29279380 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:105,306,305...105,403,718 		JBrowse link
G Bin1 bridging integrator 1 is_active_in IDA PMID:9348539 SynGO PMID:9348539 RGD:631926 NCBI chr18:24,282,840...24,341,461
Ensembl chr18:24,283,801...24,341,458 		JBrowse link
G Btbd8 BTB domain containing 8 is_active_in IEA
ISO 		GO_REF:0000107
(PMID:29262337) 		Ensembl
RGD		 PMID:29262337 GO_REF:0000107 NCBI chr14:2,410,093...2,483,114
Ensembl chr14:2,410,093...2,479,202 		JBrowse link
G Cltc clathrin heavy chain is_active_in IDA
IEP 		PMID:1325974 SynGO PMID:1325974 PMID:1325974 RGD:13702292, RGD:13702292 NCBI chr10:72,014,984...72,073,308
Ensembl chr10:72,014,986...72,070,691 		JBrowse link
G Doc2a double C2 domain alpha is_active_in
located_in 		IDA
IEP
IBA
IEA 		PMID:9115738
GO_REF:0000033
GO_REF:0000117 		GO_Central
UniProt		 PMID:9115738 PMID:9115738 GO_REF:0000033 GO_REF:0000117, RGD:1357915, RGD:1357915 NCBI chr 1:190,887,306...190,893,057
Ensembl chr 1:190,888,214...190,893,384 		JBrowse link
G Doc2b double C2 domain beta is_active_in
located_in 		IDA
IEP
IEA 		PMID:9115738
GO_REF:0000117 		UniProt PMID:9115738 PMID:9115738 GO_REF:0000117, RGD:1357915, RGD:1357915 NCBI chr10:61,126,295...61,151,533
Ensembl chr10:61,126,295...61,151,533 		JBrowse link
G Doc2g double C2-like domains, gamma located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:210,724,868...210,729,352
Ensembl chr 1:210,725,748...210,730,048 		JBrowse link
G Rph3a rabphilin 3A is_active_in
located_in 		EXP
IDA
IEP
IBA
IEA 		PMID:17110340
PMID:8060298
GO_REF:0000033
GO_REF:0000117 		GO_Central
UniProt		 PMID:17110340 PMID:8060298 PMID:17110340 PMID:17110340 GO_REF:0000033 GO_REF:0000117, RGD:12050113, RGD:13702383, RGD:12050113, RGD:12050113 NCBI chr12:41,203,004...41,279,536
Ensembl chr12:41,200,089...41,279,531 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha is_active_in IMP
IDA
IEP 		PMID:11580898 SynGO PMID:11580898 PMID:11580898 PMID:11580898 RGD:13702369, RGD:13702369, RGD:13702369 NCBI chr 7:9,304,381...9,321,157
Ensembl chr 7:9,304,197...9,321,669 		JBrowse link
G Snap29 synaptosome associated protein 29 is_active_in IDA
EXP 		PMID:17110340 SynGO PMID:17110340 PMID:17110340 RGD:12050113, RGD:12050113 NCBI chr11:97,082,721...97,113,195
Ensembl chr11:97,082,739...97,113,195 		JBrowse link
G Syn1 synapsin I is_active_in IDA
EXP
IEP 		PMID:6404912
PMID:23622064
PMID:31959215 		SynGO PMID:6404912 PMID:23622064 PMID:23622064 PMID:31959215 PMID:6404912 RGD:13702282, RGD:13702180, RGD:13702180, RGD:155230771, RGD:13702282 NCBI chr  X:3,725,745...3,780,940
Ensembl chr  X:3,725,714...3,780,938 		JBrowse link
G Syn2 synapsin II is_active_in IDA
IMP
EXP
IEP 		PMID:23622064
PMID:2118908 		SynGO PMID:23622064 PMID:2118908 PMID:2118908 PMID:23622064 PMID:2118908 RGD:13702180, RGD:13702354, RGD:13702354, RGD:13702180, RGD:13702354 NCBI chr 4:149,858,919...150,016,845
Ensembl chr 4:149,851,520...150,019,650 		JBrowse link
G Syn3 synapsin III is_active_in IDA
EXP
IEP 		PMID:9539796
PMID:23622064 		SynGO PMID:9539796 PMID:23622064 PMID:23622064 PMID:9539796 RGD:13702156, RGD:13702180, RGD:13702180, RGD:13702156 NCBI chr 7:19,244,032...19,701,571
Ensembl chr 7:19,264,094...19,696,510 		JBrowse link
G Tprg1l tumor protein p63 regulated 1-like is_active_in IDA PMID:26212709 SynGO PMID:26212709 RGD:13792549 NCBI chr 5:170,004,577...170,007,784
Ensembl chr 5:170,004,577...170,007,983 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      extrinsic component of membrane 187
        extrinsic component of organelle membrane 41
          extrinsic component of synaptic vesicle membrane 25
Path 2
Term Annotations click to browse term
  cellular_component 19485
    cellular anatomical structure 19353
      intracellular anatomical structure 14908
        intracellular organelle 13261
          intracellular membrane-bounded organelle 11899
            intracellular vesicle 2180
              cytoplasmic vesicle 2171
                cytoplasmic vesicle membrane 951
                  transport vesicle membrane 266
                    exocytic vesicle membrane 191
                      synaptic vesicle membrane 191
                        extrinsic component of synaptic vesicle membrane 25
paths to the root