Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:postsynaptic early endosome
go back to main search page
Accession:GO:0098842 term browser browse the term
Definition:An early endosome of the postsynapse. It acts as the major sorting station on the endocytic pathway, targeting neurotransmitter receptors for degregation or recycling.
Comment:Commonly used markers for postsynaptic early endosomes include RAB5A and EEA1.


show annotations for term's descendants           Sort by:
postsynaptic early endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EEA1 early endosome antigen 1 is_active_in ISO (PMID:17113235), (PMID:34564930) SynGO PMID:17113235 PMID:34564930 NCBI chr15:33,145,250...33,234,899
Ensembl chr15:33,148,637...33,256,669 		JBrowse link
G PICK1 protein interacting with PRKCA 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:26,595,301...26,614,170
Ensembl chr10:26,595,768...26,613,756 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in
is_active_in		 ISO
IBA		 PMID:10930461 SynGO
GO_Central		 PMID:10930461 GO_REF:0000033 RGD:12050141 NCBI chr23:23,303,650...23,333,571
Ensembl chr23:23,304,940...23,332,206 		JBrowse link
G SNX27 sorting nexin 27 is_active_in ISO (PMID:24458027) SynGO PMID:24458027 NCBI chr17:60,653,719...60,727,928
Ensembl chr17:60,653,732...60,724,253 		JBrowse link
G SNX6 sorting nexin 6 is_active_in ISO (PMID:28134614) SynGO PMID:28134614 NCBI chr 8:13,460,676...13,520,282
Ensembl chr 8:13,460,947...13,520,423 		JBrowse link
G VPS26B VPS26, retromer complex component B is_active_in ISO (PMID:34965419) SynGO PMID:34965419 NCBI chr 5:1,000,035...1,020,195
Ensembl chr 5:999,392...1,020,196 		JBrowse link
extrinsic component of postsynaptic early endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRIPAP1 GRIP1 associated protein 1 is_active_in
located_in		 ISO
IEA		 PMID:20098723 SynGO
TreeGrafter		 PMID:20098723 GO_REF:0000118 RGD:12050105 NCBI chr  X:42,121,646...42,145,330
Ensembl chr  X:42,121,301...42,145,218 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18914
    cellular anatomical entity 18660
      postsynapse 928
        postsynaptic endosome 27
          postsynaptic early endosome 7
            postsynaptic early endosome membrane + 1
Path 2
Term Annotations click to browse term
  cellular_component 18914
    cellular anatomical entity 18660
      organelle 13247
        membrane-bounded organelle 12045
          intracellular membrane-bounded organelle 11481
            intracellular vesicle 1943
              cytoplasmic vesicle 1933
                endosome 916
                  postsynaptic endosome 27
                    postsynaptic early endosome 7
                      postsynaptic early endosome membrane + 1
paths to the root