ONTOLOGY REPORT - ANNOTATIONS
Term: cell aggregation
Accession: GO:0098743
browse the term
Definition: The clustering together and adhesion of initially separate cells to form an aggregate. Examples include the clustering of unicellular organisms or blood cells in suspension and the condensation of mesenchymal cells during cartilage formation.
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Mpz
myelin protein zero
involved_in
ISO ISS IEA
(PMID:18337304) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:18337304
GO_REF:0000024 GO_REF:0000107
NCBI chr13:83,570,811...83,576,680
Ensembl chr13:83,570,811...83,576,679
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Tmigd1
transmembrane and immunoglobulin domain containing 1
acts_upstream_of_or_within
ISO IEA
(PMID:26342724) GO_REF:0000107
RGD Ensembl
PMID:26342724
GO_REF:0000107
NCBI chr10:61,739,071...61,751,025
Ensembl chr10:61,736,462...61,751,025
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Acan
aggrecan
acts_upstream_of_or_within
ISO IEA
MGI:1856465 (PMID:3070812) GO_REF:0000107
RGD Ensembl
PMID:3070812
GO_REF:0000107
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
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Barx2
BARX homeobox 2
acts_upstream_of_or_within
ISO IEA
(PMID:15800003) GO_REF:0000107
RGD Ensembl
PMID:15800003
GO_REF:0000107
NCBI chr 8:30,251,132...30,319,105
Ensembl chr 8:30,251,132...30,319,013
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Bmpr1b
bone morphogenetic protein receptor type 1B
acts_upstream_of_or_within
ISO IEA
MGI:2158498 (PMID:10631181) GO_REF:0000107
RGD Ensembl
PMID:10631181
GO_REF:0000107
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
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Ccn2
cellular communication network factor 2
acts_upstream_of_or_within
ISO
(PMID:15305294)
RGD
PMID:15305294
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
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Chad
chondroadherin
IEP
RGD
PMID:9461555
RGD:69806
NCBI chr10:79,512,170...79,515,941
Ensembl chr10:79,511,931...79,515,940
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Col11a1
collagen type XI alpha 1 chain
acts_upstream_of_or_within
ISO
MGI:1856399 (PMID:3070812)
RGD
PMID:3070812
NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853
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Col2a1
collagen type II alpha 1 chain
acts_upstream_of_or_within
ISO IEA
MGI:1857275 (PMID:3070812) GO_REF:0000107
RGD Ensembl
PMID:3070812
GO_REF:0000107
NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546
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Fgf4
fibroblast growth factor 4
acts_upstream_of_or_within
ISO IEA
MGI:98726 (PMID:8565825) GO_REF:0000107
RGD Ensembl
PMID:8565825
GO_REF:0000107
NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466
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Fgf6
fibroblast growth factor 6
acts_upstream_of_or_within
ISO IEA
MGI:98726 (PMID:8565825) GO_REF:0000107
RGD Ensembl
PMID:8565825
GO_REF:0000107
NCBI chr 4:159,854,913...159,863,447
Ensembl chr 4:159,854,913...159,863,447
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Mapk14
mitogen activated protein kinase 14
involved_in
IEA ISO
GO_REF:0000107 (PMID:17202865)
Ensembl RGD
PMID:17202865
GO_REF:0000107
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
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Mycn
MYCN proto-oncogene, bHLH transcription factor
acts_upstream_of_or_within
ISO IEA
(PMID:17360777) GO_REF:0000107
RGD Ensembl
PMID:17360777
GO_REF:0000107
NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
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Myf5
myogenic factor 5
acts_upstream_of_or_within
ISO IEA
MGI:1857219 (PMID:8565825) GO_REF:0000107
RGD Ensembl
PMID:8565825
GO_REF:0000107
NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
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Otor
otoraplin
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:10998416)
GO_Central Ensembl RGD
PMID:10998416
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:130,415,339...130,418,601
Ensembl chr 3:130,415,339...130,418,601
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Pkd1
polycystin 1, transient receptor potential channel interacting
acts_upstream_of_or_within
ISO IEA
MGI:2152589 (PMID:11593033) GO_REF:0000107
RGD Ensembl
PMID:11593033
GO_REF:0000107
NCBI chr10:13,573,779...13,621,138
Ensembl chr10:13,573,021...13,621,128
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Ror2
receptor tyrosine kinase-like orphan receptor 2
acts_upstream_of_or_within
ISO
MGI:2183225 (PMID:14745966)
RGD
PMID:14745966
NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
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Sox5
SRY-box transcription factor 5
involved_in
ISS ISO
GO_REF:0000024 (PMID:11702786), (PMID:14993235)
UniProt RGD
PMID:11702786 PMID:14993235
GO_REF:0000024
NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
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Sox6
SRY-box transcription factor 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:11702786), (PMID:14993235)
UniProt RGD
PMID:11702786 PMID:14993235
GO_REF:0000024
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
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Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 MGI:2158693|MGI:2385468 (PMID:10319868), (PMID:12414734)
UniProt Ensembl RGD
PMID:10319868 PMID:12414734
GO_REF:0000024 GO_REF:0000107
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Sulf1
sulfatase 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 5:6,362,894...6,526,174
Ensembl chr 5:6,362,911...6,525,584
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Tgfb2
transforming growth factor, beta 2
acts_upstream_of_or_within
ISO IEA
MGI:95518|MGI:95520 (PMID:8565825) GO_REF:0000107
RGD Ensembl
PMID:8565825
GO_REF:0000107
NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405
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Thra
thyroid hormone receptor alpha
acts_upstream_of_or_within
ISO
MGI:1860442 (PMID:9250685)
RGD
PMID:9250685
NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
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Uncx
UNC homeobox
acts_upstream_of_or_within
ISO IEA
MGI:1859373|MGI:1928812 (PMID:10804168), (PMID:10804169) GO_REF:0000107
RGD Ensembl
PMID:10804168 PMID:10804169
GO_REF:0000107
NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300
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Wnt7a
Wnt family member 7A
involved_in
ISO IEA
(PMID:17202865) GO_REF:0000107
RGD Ensembl
PMID:17202865
GO_REF:0000107
NCBI chr 4:125,420,276...125,466,149
Ensembl chr 4:123,863,108...123,908,981
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Bpifa1
BPI fold containing family A, member 1
involved_in
ISS ISO IBA
GO_REF:0000024 (PMID:23499554) GO_REF:0000033
UniProt RGD GO_Central
PMID:23499554
GO_REF:0000024 GO_REF:0000033
NCBI chr 3:142,627,810...142,633,553
Ensembl chr 3:142,627,810...142,633,552
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Bpifa5
BPI fold containing family A, member 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:142,646,103...142,652,884
Ensembl chr 3:142,646,103...142,652,883
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Ltf
lactotransferrin
involved_in
ISO
(PMID:12037568)
RGD
PMID:12037568
NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
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