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ONTOLOGY REPORT - ANNOTATIONS

Term:maintenance of cell number
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Accession:GO:0098727 term browser browse the term
Definition:Any process by which the numbers of cells of a particular type or in a tissue are maintained.


show annotations for term's descendants           Sort by:
maintenance of cell number term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfap70 cilia and flagella associated protein 70 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:37352829)		 Ensembl
RGD		 PMID:37352829 GO_REF:0000107 NCBI chr15:3,852,381...3,918,036
Ensembl chr15:3,852,509...3,918,014 		JBrowse link
G Cylc1 cylicin 1 acts_upstream_of_or_within ISO (PMID:38013430) RGD PMID:38013430 NCBI chr  X:76,108,111...76,197,431
Ensembl chr  X:76,108,136...76,197,422 		JBrowse link
G Cylc2 cylicin 2 acts_upstream_of_or_within ISO (PMID:38013430) RGD PMID:38013430 NCBI chr 5:65,554,320...65,576,251
Ensembl chr 5:65,554,309...65,589,282 		JBrowse link
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO MGI:5544070 (PMID:24006281) RGD PMID:24006281 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122 		JBrowse link
G Mecom MDS1 and EVI1 complex locus acts_upstream_of_or_within ISO MGI:1917923 (PMID:24703692) RGD PMID:24703692 NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590 		JBrowse link
G Zic1 Zic family member 1 involved_in ISO MGI:106676 (PMID:17507568) RGD PMID:17507568 NCBI chr 8:91,908,548...91,918,020
Ensembl chr 8:91,908,576...91,912,731 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106683 (PMID:17507568) RGD PMID:17507568 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crebbp CREB binding protein acts_upstream_of_or_within ISO MGI:2177588|MGI:3618462 (PMID:17936260) RGD PMID:17936260 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:18281459), (PMID:19745153) RGD PMID:18281459 PMID:19745153 NCBI chr 1:78,635,668...78,637,128
Ensembl chr 1:78,635,668...78,637,128 		JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (PMID:19114715) RGD PMID:19114715 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 acts_upstream_of_or_within ISO MGI:2177588|MGI:3578312 (PMID:15486564) RGD PMID:15486564 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO MGI:4441771 (PMID:23670199) RGD PMID:23670199 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:2176695 (PMID:19776388) RGD PMID:19776388 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:32868762) RGD PMID:32868762 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
male germ-line stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jmjd1c jumonji domain containing 1C acts_upstream_of_or_within ISO MGI:5544070 (PMID:24006281) RGD PMID:24006281 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122 		JBrowse link
G Tuba3b tubulin, alpha 3B acts_upstream_of_or_within ISO MGI:1095406 (PMID:34326397) RGD PMID:34326397 NCBI chr 4:178,588,779...178,594,328
Ensembl chr 4:178,588,779...178,594,326 		JBrowse link
mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3603818 (PMID:24550112) RGD PMID:24550112 NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705 		JBrowse link
mesenchymal stem cell maintenance involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six2 SIX homeobox 2 involved_in ISO (PMID:18682239), (PMID:21350016), (PMID:22902740), (PMID:24598167) RGD PMID:18682239 PMID:21350016 PMID:22902740 PMID:24598167 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Wnt9b Wnt family member 9B acts_upstream_of_or_within ISO MGI:3526437 (PMID:21350016) RGD PMID:21350016 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1b HNF1 homeobox B involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857856 (PMID:20040500)		 Ensembl
RGD		 PMID:20040500 GO_REF:0000107 NCBI chr10:68,735,894...68,789,888
Ensembl chr10:68,735,894...68,789,888 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax2 paired box 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321 		JBrowse link
G Pax8 paired box 8 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17314325)		 UniProt
RGD		 PMID:17314325 GO_REF:0000024 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363 		JBrowse link
negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 acts_upstream_of_or_within ISO MGI:1857654 (PMID:9056639) RGD PMID:9056639 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
negative regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir145 microRNA 145 involved_in ISO (PMID:19409607) RGD PMID:19409607 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727 		JBrowse link
negative regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Loxl2 lysyl oxidase-like 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25959397)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:25959397 GO_REF:0000024 GO_REF:0000107 NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067 		JBrowse link
G Wnt9b Wnt family member 9B involved_in ISO (PMID:25640183) RGD PMID:25640183 NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035 		JBrowse link
G Zfp706 zinc finger protein 706 involved_in ISO (PMID:24412312) RGD PMID:24412312 NCBI chr 7:68,167,496...68,174,121
Ensembl chr 7:68,166,323...68,174,148 		JBrowse link
neuronal stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspm assembly factor for spindle microtubules acts_upstream_of_or_within ISO (PMID:19896444) RGD PMID:19896444 NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755 		JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:24952463)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:24952463 GO_REF:0000024 GO_REF:0000107 NCBI chr18:7,776,704...7,990,934
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:23695674)
GO_REF:0000024
(PMID:19682396)		 Ensembl
RGD
UniProt		 PMID:19682396 PMID:23695674 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179 		JBrowse link
G Fancc FA complementation group C involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890081 (PMID:24483844)		 Ensembl
RGD		 PMID:24483844 GO_REF:0000107 NCBI chr17:1,680,660...1,822,610
Ensembl chr17:1,681,324...1,829,376 		JBrowse link
G Fancd2 FA complementation group D2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1890081 (PMID:24483844)		 Ensembl
RGD		 PMID:24483844 GO_REF:0000107 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412 		JBrowse link
G Foxo1 forkhead box O1 acts_upstream_of_or_within ISO MGI:1890081 (PMID:19896444) RGD PMID:19896444 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790 		JBrowse link
G Foxo3 forkhead box O3 acts_upstream_of_or_within ISO MGI:1890077|MGI:2448480|MGI:95480 (PMID:19896444), (PMID:24483844) RGD PMID:19896444 PMID:24483844 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561 		JBrowse link
G Fut10 fucosyltransferase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23986452)		 Ensembl
RGD		 PMID:23986452 GO_REF:0000107 NCBI chr16:60,868,761...60,958,762
Ensembl chr16:60,877,952...60,958,683 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in IEA
ISO
IDA		 GO_REF:0000107
(PMID:11399758)
(PMID:19682396)		 Ensembl
RGD		 PMID:11399758 PMID:19682396 PMID:11399758 GO_REF:0000107, RGD:8554692 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hes5 hes family bHLH transcription factor 5 involved_in ISO
IDA		 (PMID:19682396)
(PMID:11399758)		 RGD PMID:11399758 PMID:19682396 PMID:11399758 RGD:8554692 NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001 		JBrowse link
G Hook3 hook microtubule-tethering protein 3 acts_upstream_of_or_within ISO (PMID:20152126) RGD PMID:20152126 NCBI chr16:65,954,293...66,058,812
Ensembl chr16:65,954,350...66,061,338 		JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 acts_upstream_of_or_within ISO MGI:3043746 (PMID:24192035) RGD PMID:24192035 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISO
IEA		 (PMID:19682396)
GO_REF:0000107		 RGD
Ensembl		 PMID:19682396 GO_REF:0000107 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within IGI
IMP		 PMID:24388750 MGI PMID:24388750 PMID:24388750 RGD:10047173, RGD:10047173 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:5308745 (PMID:21947081) RGD PMID:21947081 NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122 		JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:24952463)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24952463 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:144,279,096...144,323,572
Ensembl chr 3:144,279,096...144,323,572 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:19682396) RGD PMID:19682396 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Pcm1 pericentriolar material 1 acts_upstream_of_or_within ISO (PMID:20152126) RGD PMID:20152126 NCBI chr16:51,008,315...51,105,261
Ensembl chr16:51,008,315...51,105,091 		JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:20808958) RGD PMID:20808958 NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183 		JBrowse link
G Prrx1 paired related homeobox 1 acts_upstream_of_or_within ISO (PMID:23447615) RGD PMID:23447615 NCBI chr13:75,600,777...75,671,896
Ensembl chr13:75,601,706...75,670,866 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:27819263)		 UniProt
RGD		 PMID:27819263 GO_REF:0000024 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Sct secretin acts_upstream_of_or_within ISO MGI:3815315 (PMID:21159798) RGD PMID:21159798 NCBI chr 1:196,382,857...196,383,668
Ensembl chr 1:196,382,856...196,383,658 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO (PMID:22198669) RGD PMID:22198669 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Srrt serrate, RNA effector molecule involved_in ISO (PMID:22198669) RGD PMID:22198669 NCBI chr12:19,392,578...19,406,098
Ensembl chr12:19,392,625...19,406,095 		JBrowse link
G Ss18 SS18 subunit of BAF chromatin remodeling complex acts_upstream_of_or_within ISO (PMID:23785148) RGD PMID:23785148 NCBI chr18:5,773,042...5,835,696
Ensembl chr18:5,773,042...5,835,333 		JBrowse link
G Wdr47 WD repeat domain 47 acts_upstream_of_or_within ISO MGI:6102912 (PMID:29078390) RGD PMID:29078390 NCBI chr 2:196,226,757...196,287,739
Ensembl chr 2:196,205,238...196,287,739 		JBrowse link
G Yme1l1 YME1-like 1 ATPase involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:35172139)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:35172139 GO_REF:0000024 GO_REF:0000107 NCBI chr17:85,287,607...85,326,068
Ensembl chr17:85,287,554...85,326,335 		JBrowse link
positive regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbh LBH regulator of WNT signaling pathway involved_in ISO (PMID:25655704) RGD PMID:25655704 NCBI chr 6:22,569,238...22,593,056
Ensembl chr 6:22,568,834...22,593,079 		JBrowse link
G Tp63 tumor protein p63 involved_in ISO (PMID:25655704) RGD PMID:25655704 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
positive regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esrrb estrogen-related receptor beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:23019124), (PMID:23040477), (PMID:23040478), (PMID:26206133)		 UniProt
RGD		 PMID:23019124 PMID:23040477 PMID:23040478 PMID:26206133 GO_REF:0000024 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Kdm2b lysine demethylase 2B acts_upstream_of_or_within ISO (PMID:21540074) RGD PMID:21540074 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:23019124)		 UniProt
RGD		 PMID:23019124 GO_REF:0000024 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594 		JBrowse link
G Prdm14 PR/SET domain 14 involved_in ISO (PMID:26523391), (PMID:27281218) RGD PMID:26523391 PMID:27281218 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISO
IEA
ISS		 (PMID:21258371)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:21258371 GO_REF:0000024 GO_REF:0000107 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:27912097) RGD PMID:27912097 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Tead1 TEA domain transcription factor 1 acts_upstream_of_or_within ISO MGI:106907|MGI:109241 (PMID:20516196) RGD PMID:20516196 NCBI chr 1:166,791,900...167,010,591
Ensembl chr 1:166,792,628...167,003,369 		JBrowse link
G Tead3 TEA domain transcription factor 3 acts_upstream_of_or_within ISO MGI:101876|MGI:106907 (PMID:20516196) RGD PMID:20516196 NCBI chr20:6,392,053...6,411,446
Ensembl chr20:6,392,053...6,411,446 		JBrowse link
G Tead4 TEA domain transcription factor 4 acts_upstream_of_or_within ISO MGI:101876|MGI:109241 (PMID:20516196) RGD PMID:20516196 NCBI chr 4:161,474,122...161,572,837
Ensembl chr 4:161,497,851...161,572,323 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20516196)		 Ensembl
RGD		 PMID:20516196 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
G Zfp322a zinc finger protein 322a involved_in ISO (PMID:24550733) RGD PMID:24550733 NCBI chr17:41,773,789...41,789,654
Ensembl chr17:41,773,782...41,790,078 		JBrowse link
regulation of somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:31005419)		 UniProt
RGD		 PMID:31005419 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1934268|MGI:2445832 (PMID:17199044)		 Ensembl
RGD		 PMID:17199044 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Taf5l1 TATA-box binding protein associated factor 5 like 1 involved_in ISO (PMID:31005419) RGD PMID:31005419 NCBI chr19:51,991,704...52,011,001
Ensembl chr19:51,991,708...52,011,295 		JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like involved_in ISO (PMID:31005419) RGD PMID:31005419 NCBI chr 1:205,672,147...205,684,721
Ensembl chr 1:205,672,149...205,684,655 		JBrowse link
G Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor acts_upstream_of_or_within ISO MGI:1858004 (PMID:19850742) RGD PMID:19850742 NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:18467660) RGD PMID:18467660 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287 		JBrowse link
regulation of stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:22367759) RGD PMID:22367759 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574 		JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 involved_in ISO
IBA		 (PMID:22367759)
GO_REF:0000033		 RGD
GO_Central		 PMID:22367759 GO_REF:0000033 NCBI chr 7:52,130,445...52,222,338
Ensembl chr 7:52,130,441...52,223,575 		JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 involved_in ISO
IBA		 (PMID:22367759)
GO_REF:0000033		 RGD
GO_Central		 PMID:22367759 GO_REF:0000033 NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISO (PMID:24394384) RGD PMID:24394384 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17624332)		 UniProt
RGD		 PMID:17624332 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:30270482) RGD PMID:30270482 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kdm3a lysine demethylase 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1097166 (PMID:17938240)		 Ensembl
RGD		 PMID:17938240 GO_REF:0000107 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 acts_upstream_of_or_within ISO (PMID:22977234) RGD PMID:22977234 NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594 		JBrowse link
G Ptn pleiotrophin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21791434)		 UniProt
Ensembl
RGD		 PMID:21791434 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Sav1 salvador family WW domain containing protein 1 acts_upstream_of_or_within ISO MGI:3790763 (PMID:18369314) RGD PMID:18369314 NCBI chr 6:88,478,536...88,500,121
Ensembl chr 6:88,478,539...88,499,968 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (PMID:18347094) RGD PMID:18347094 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287 		JBrowse link
G Tcl1a Tcl1 family Akt coactivator A acts_upstream_of_or_within ISO MGI:2446210 (PMID:17938240) RGD PMID:17938240 NCBI chr 6:124,125,032...124,131,025
Ensembl chr 6:124,125,032...124,131,025 		JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO (PMID:31128943) RGD PMID:31128943 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846 		JBrowse link
G Zc3h13 zinc finger CCCH type containing 13 involved_in ISO (PMID:29547716) RGD PMID:29547716 NCBI chr15:50,607,335...50,671,802
Ensembl chr15:50,607,380...50,671,802 		JBrowse link
skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO MGI:2661097|MGI:3574960 (PMID:21498568) RGD PMID:21498568 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Fzd7 frizzled class receptor 7 acts_upstream_of_or_within ISO (PMID:19497282) RGD PMID:19497282 NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA		 (PMID:17531227)
GO_REF:0000107		 RGD
Ensembl		 PMID:17531227 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Selenon selenoprotein N involved_in ISO (PMID:21131290) RGD PMID:21131290 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO (PMID:19497282) RGD PMID:19497282 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
somatic stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:104642|MGI:1856318|MGI:1857966 (PMID:1541640), (PMID:18725524) RGD PMID:1541640 PMID:18725524 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:3846671 (PMID:19269367) RGD PMID:19269367 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Bcl9 BCL9, transcription coactivator acts_upstream_of_or_within ISO MGI:1933114 (PMID:20682801) RGD PMID:20682801 NCBI chr 2:184,760,616...184,846,261
Ensembl chr 2:184,760,618...184,786,435 		JBrowse link
G Bcl9l BCL9 like acts_upstream_of_or_within ISO MGI:1924828 (PMID:20682801) RGD PMID:20682801 NCBI chr 8:44,811,977...44,840,611
Ensembl chr 8:44,811,977...44,840,611 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2158342 (PMID:17699604) RGD PMID:17699604 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO MGI:97847 (PMID:23022482) RGD PMID:23022482 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A acts_upstream_of_or_within ISO MGI:101761 (PMID:18957199) RGD PMID:18957199 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Cdx2 caudal type homeo box 2 acts_upstream_of_or_within ISO MGI:1857928 (PMID:16325584), (PMID:20404091) RGD PMID:16325584 PMID:20404091 NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142 		JBrowse link
G Cul4a cullin 4A acts_upstream_of_or_within ISO MGI:2183544 (PMID:17616641) RGD PMID:17616641 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330 		JBrowse link
G Elf5 E74 like ETS transcription factor 5 acts_upstream_of_or_within ISO (PMID:24859262) RGD PMID:24859262 NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973 		JBrowse link
G Esrrb estrogen-related receptor beta acts_upstream_of_or_within ISO (PMID:16518401), (PMID:16767105), (PMID:20720539) RGD PMID:16518401 PMID:16767105 PMID:20720539 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Fgf10 fibroblast growth factor 10 acts_upstream_of_or_within ISO MGI:1859647 (PMID:11880361) RGD PMID:11880361 NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO MGI:97359 (PMID:15328412) RGD PMID:15328412 NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:1931521 (PMID:19407216) RGD PMID:19407216 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Gata2 GATA binding protein 2 acts_upstream_of_or_within ISO (PMID:16082385) RGD PMID:16082385 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761 		JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2149672 (PMID:10615124)		 Ensembl
RGD		 PMID:10615124 GO_REF:0000107 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192 		JBrowse link
G Hmga2 high mobility group AT-hook 2 acts_upstream_of_or_within ISO MGI:104738|MGI:2386412 (PMID:18957199) RGD PMID:18957199 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784 		JBrowse link
G Kat6a lysine acetyltransferase 6A acts_upstream_of_or_within ISO MGI:3626344 (PMID:16651658), (PMID:16702405) RGD PMID:16651658 PMID:16702405 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP neural stem cells from the ciliary epithelium of the eye RGD PMID:15302600 RGD:2292509 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19379700)		 Ensembl
RGD		 PMID:19379700 GO_REF:0000107 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994 		JBrowse link
G Klf4 KLF transcription factor 4 acts_upstream_of_or_within ISO (PMID:15358627) RGD PMID:15358627 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO MGI:109360 (PMID:17991461) RGD PMID:17991461 NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013 		JBrowse link
G Ldb2 LIM domain binding 2 acts_upstream_of_or_within ISO MGI:894762 (PMID:17991461) RGD PMID:17991461 NCBI chr14:66,277,044...66,598,071
Ensembl chr14:66,277,085...66,597,778 		JBrowse link
G Lif LIF, interleukin 6 family cytokine acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1201791|MGI:1342287 (PMID:15358627)
GO_REF:0000107		 RGD
Ensembl		 PMID:15358627 GO_REF:0000107 NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482 		JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:3714783 (PMID:17554302) RGD PMID:17554302 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040 		JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO MGI:3663738 (PMID:19672307) RGD PMID:19672307 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Med10 mediator complex subunit 10 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 1:33,470,064...33,481,698
Ensembl chr 1:33,470,066...33,475,767 		JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr  X:66,404,807...66,427,775
Ensembl chr  X:66,404,760...66,428,387 		JBrowse link
G Med14 mediator complex subunit 14 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr  X:10,036,749...10,127,910
Ensembl chr  X:10,036,805...10,126,240 		JBrowse link
G Med15 mediator complex subunit 15 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr11:83,280,722...83,356,006
Ensembl chr11:83,280,762...83,355,362 		JBrowse link
G Med17 mediator complex subunit 17 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 8:12,101,594...12,120,592
Ensembl chr 8:12,101,594...12,120,592 		JBrowse link
G Med21 mediator complex subunit 21 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 4:179,560,509...179,583,811
Ensembl chr 4:179,560,579...179,567,548 		JBrowse link
G Med24 mediator complex subunit 24 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr10:83,664,609...83,702,315
Ensembl chr10:83,664,609...83,690,123 		JBrowse link
G Med27 mediator complex subunit 27 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 3:12,629,593...12,803,340
Ensembl chr 3:12,629,603...12,803,339 		JBrowse link
G Med28 mediator complex subunit 28 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr14:65,594,785...65,603,583
Ensembl chr14:65,594,647...65,603,583 		JBrowse link
G Med30 mediator complex subunit 30 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 7:84,004,735...84,026,474
Ensembl chr 7:84,004,722...84,026,595 		JBrowse link
G Med6 mediator complex subunit 6 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 6:101,270,410...101,283,929
Ensembl chr 6:101,270,410...101,283,876 		JBrowse link
G Med7 mediator complex subunit 7 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr10:30,842,330...30,857,873
Ensembl chr10:30,842,292...30,859,220 		JBrowse link
G Nanog Nanog homeobox involved_in
acts_upstream_of_or_within		 ISO (PMID:18388306)
MGI:2664492 (PMID:12787504), (PMID:16767105), (PMID:16801560), (PMID:20720539)		 RGD PMID:12787504 PMID:16767105 PMID:16801560 PMID:18388306 PMID:20720539 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Nipbl NIPBL, cohesin loading factor acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Nkap NFKB activating protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3765313|MGI:4839023 (PMID:20610818)		 Ensembl
RGD		 PMID:20610818 GO_REF:0000107 NCBI chr  X:116,373,031...116,392,677
Ensembl chr  X:116,372,839...116,394,945 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:2180793|MGI:95518 (PMID:15505202), (PMID:16678814) RGD PMID:15505202 PMID:16678814 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Nog noggin involved_in ISO
IEA		 (PMID:17889703)
GO_REF:0000107		 RGD
Ensembl		 PMID:17889703 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176560|MGI:3764730|MGI:3807544 (PMID:12527005), (PMID:14702088), (PMID:18794344) RGD PMID:12527005 PMID:14702088 PMID:18794344 NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949 		JBrowse link
G Pla2g2a phospholipase A2 group IIA acts_upstream_of_or_within ISO MGI:88039 (PMID:1541640) RGD PMID:1541640 NCBI chr 5:151,076,442...151,079,019
Ensembl chr 5:151,076,442...151,079,014 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:19736317)
MGI:1933381 (PMID:14502573), (PMID:16767105), (PMID:20720539), (PMID:9814708)
(PMID:18388306), (PMID:19409607)		 RGD PMID:9814708 PMID:14502573 PMID:16767105 PMID:18388306 PMID:19409607 More... NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO (PMID:19379700) RGD PMID:19379700 NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601 		JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88190 (PMID:23022482)		 Ensembl
RGD		 PMID:23022482 GO_REF:0000107 NCBI chr 4:148,679,534...148,740,265
Ensembl chr 4:148,679,530...148,740,317 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO MGI:3583755 (PMID:21402740) RGD PMID:21402740 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(PMID:27819263)		 UniProt
RGD		 PMID:27819263 GO_REF:0000024 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Rif1 replication timing regulatory factor 1 acts_upstream_of_or_within ISO (PMID:16518401) RGD PMID:16518401 NCBI chr 3:36,554,689...36,607,961
Ensembl chr 3:36,554,697...36,603,617 		JBrowse link
G Sall4 spalt-like transcription factor 4 acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr 3:157,474,067...157,491,055
Ensembl chr 3:157,474,642...157,490,822 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3621116 (PMID:19664990)		 Ensembl
RGD		 PMID:19664990 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO (PMID:19379700) RGD PMID:19379700 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Smc1a structural maintenance of chromosomes 1A involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20720539)		 Ensembl
RGD		 PMID:20720539 GO_REF:0000107 NCBI chr  X:21,103,323...21,148,053
Ensembl chr  X:21,103,282...21,148,056 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:18388306), (PMID:19409607), (PMID:19736317)
(PMID:16767105), (PMID:20720539)		 RGD PMID:16767105 PMID:18388306 PMID:19409607 PMID:19736317 PMID:20720539 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sox4 SRY-box transcription factor 4 acts_upstream_of_or_within ISO (PMID:19379700) RGD PMID:19379700 NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2176173|MGI:2429649 (PMID:20871603)		 UniProt
RGD		 PMID:20871603 GO_REF:0000024 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Spi1 Spi-1 proto-oncogene acts_upstream_of_or_within ISO (PMID:19379700) RGD PMID:19379700 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20720539)		 Ensembl
RGD		 PMID:20720539 GO_REF:0000107 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISO (PMID:22495305) RGD PMID:22495305 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO MGI:1202879 (PMID:19718027) RGD PMID:19718027 NCBI chr 4:104,680,734...104,846,086
Ensembl chr 4:104,680,739...104,845,287 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:1202876|MGI:1926344 (PMID:10027409), (PMID:19251639), (PMID:19718027), (PMID:9697701) RGD PMID:9697701 PMID:10027409 PMID:19251639 PMID:19718027 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Tcl1a Tcl1 family Akt coactivator A acts_upstream_of_or_within ISO (PMID:16767105) RGD PMID:16767105 NCBI chr 6:124,125,032...124,131,025
Ensembl chr 6:124,125,032...124,131,025 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO MGI:3040993 (PMID:20404091) RGD PMID:20404091 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (PMID:19497282) RGD PMID:19497282 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Vps72 vacuolar protein sorting 72 homolog acts_upstream_of_or_within ISO (PMID:19379700) RGD PMID:19379700 NCBI chr 2:182,678,594...182,690,185
Ensembl chr 2:182,678,609...182,690,182 		JBrowse link
G Wnt7a Wnt family member 7A acts_upstream_of_or_within ISO MGI:1857704 (PMID:19497282) RGD PMID:19497282 NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:17980593)		 Ensembl
RGD		 PMID:17980593 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:23748442) RGD PMID:23748442 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064 		JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (PMID:19515908) RGD PMID:19515908 NCBI chr 7:89,226,358...89,374,266
Ensembl chr 7:89,226,463...89,374,378 		JBrowse link
stem cell population maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:1857966 (PMID:18725524) RGD PMID:18725524 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Arid1a AT-rich interaction domain 1A acts_upstream_of_or_within ISO MGI:3796520 (PMID:18448678) RGD PMID:18448678 NCBI chr 5:145,908,173...145,981,552
Ensembl chr 5:145,908,181...145,985,564 		JBrowse link
G Ascl2 achaete-scute family bHLH transcription factor 2 involved_in ISO (PMID:25620640) RGD PMID:25620640 NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406 		JBrowse link
G Cdc73 cell division cycle 73 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:19345177)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:19345177 GO_REF:0000024 GO_REF:0000107 NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:19345177) RGD PMID:19345177 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303 		JBrowse link
G Ddx6 DEAD-box helicase 6 acts_upstream_of_or_within ISO (PMID:25456498) RGD PMID:25456498 NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
Ensembl chr 8:44,931,974...44,964,405 		JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:2681012 (PMID:14528307) RGD PMID:14528307 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965 		JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 involved_in ISO (PMID:23594738) RGD PMID:23594738 NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616 		JBrowse link
G Dppa2 developmental pluripotency-associated 2 acts_upstream_of_or_within ISO (PMID:19846433) RGD PMID:19846433 NCBI chr11:52,549,024...52,556,740
Ensembl chr11:52,549,651...52,556,740 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1921453 (PMID:25456498)
GO_REF:0000107		 RGD
Ensembl		 PMID:25456498 GO_REF:0000107 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683 		JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 acts_upstream_of_or_within ISO MGI:95305 (PMID:25456498) RGD PMID:25456498 NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793 		JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO (PMID:20176728) RGD PMID:20176728 NCBI chr 8:118,181,340...118,189,186
Ensembl chr 8:118,181,777...118,188,316 		JBrowse link
G Esrrb estrogen-related receptor beta involved_in ISO
ISS		 (PMID:25522312)
(PMID:18957414), (PMID:23169531)
GO_REF:0000024		 RGD
UniProt		 PMID:18957414 PMID:23169531 PMID:25522312 GO_REF:0000024 NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Fgf4 fibroblast growth factor 4 acts_upstream_of_or_within ISO MGI:97359 (PMID:15328412) RGD PMID:15328412 NCBI chr 1:200,023,937...200,027,793
Ensembl chr 1:200,024,056...200,025,466 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:19505325 RGD:2325177 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fzd7 frizzled class receptor 7 involved_in ISO (PMID:18681827) RGD PMID:18681827 NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781 		JBrowse link
G Gnl3 G protein nucleolar 3 involved_in ISO (PMID:25522312) RGD PMID:25522312 NCBI chr16:6,207,402...6,213,491
Ensembl chr16:6,207,402...6,213,392 		JBrowse link
G Hesx1 HESX homeobox 1 acts_upstream_of_or_within ISO (PMID:26188092) RGD PMID:26188092 NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957 		JBrowse link
G Kdm4c lysine demethylase 4C acts_upstream_of_or_within ISO MGI:1919200 (PMID:17938240) RGD PMID:17938240 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818 		JBrowse link
G Klf4 KLF transcription factor 4 involved_in ISO (PMID:19816951) RGD PMID:19816951 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602 		JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO		 GO_REF:0000024
(PMID:19345177)		 UniProt
RGD		 PMID:19345177 GO_REF:0000024 NCBI chr 8:76,199,547...76,223,983
Ensembl chr 8:76,199,099...76,223,983 		JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (PMID:19703396) RGD PMID:19703396 NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122 		JBrowse link
G LOC120098145 homeobox protein ceh-37-like involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,199,616...68,204,251
Ensembl chr 1:68,202,754...68,204,452 		JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated acts_upstream_of_or_within ISO (PMID:25456498) RGD PMID:25456498 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852 		JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit involved_in ISO (PMID:24394384) RGD PMID:24394384 NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:24394384), (PMID:25456834), (PMID:25569111) RGD PMID:24394384 PMID:25456834 PMID:25569111 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G Miat myocardial infarction associated transcript acts_upstream_of_or_within ISO (PMID:20026622) RGD PMID:20026622 NCBI chr12:44,414,620...44,429,852 JBrowse link
G Mtf2 metal response element binding transcription factor 2 involved_in ISO (PMID:20144788) RGD PMID:20144788 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524 		JBrowse link
G Nanog Nanog homeobox involved_in
acts_upstream_of_or_within		 IEP
IBA
ISO		 GO_REF:0000033
(PMID:15108323), (PMID:25825768)
MGI:1924054 (PMID:17938240)		 GO_Central
RGD		 PMID:15108323 PMID:17938240 PMID:25825768 PMID:20352099 GO_REF:0000033, RGD:9589811 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Nfib nuclear factor I/B acts_upstream_of_or_within ISO MGI:5052268 (PMID:32393888) RGD PMID:32393888 NCBI chr 5:96,759,208...96,974,001
Ensembl chr 5:96,764,653...96,975,479 		JBrowse link
G Nfix nuclear factor I X acts_upstream_of_or_within ISO MGI:3802570 (PMID:32393888) RGD PMID:32393888 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO MGI:95518 (PMID:15505202) RGD PMID:15505202 NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837 		JBrowse link
G Obox2 oocyte specific homeobox 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,191,238...68,199,383
Ensembl chr 1:68,197,886...68,199,095 		JBrowse link
G Obox2l1 oocyte specific homeobox 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,182,725...68,184,559
Ensembl chr 1:68,183,045...68,184,743 		JBrowse link
G Obox2l2 oocyte specific homeobox 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:68,216,812...68,219,145
Ensembl chr 1:68,217,649...68,219,076 		JBrowse link
G Padi4 peptidyl arginine deiminase 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:24463520)		 UniProt
RGD		 PMID:24463520 GO_REF:0000024 NCBI chr 5:153,041,351...153,074,412
Ensembl chr 5:153,041,352...153,074,362 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:19345177) RGD PMID:19345177 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237 		JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor acts_upstream_of_or_within ISO MGI:2450933 (PMID:24835669) RGD PMID:24835669 NCBI chr 2:46,797,853...46,799,621
Ensembl chr 2:46,797,853...46,799,746 		JBrowse link
G Phf19 PHD finger protein 19 involved_in ISO (PMID:22438827) RGD PMID:22438827 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405 		JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISO (PMID:23376973), (PMID:23798425) RGD PMID:23376973 PMID:23798425 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891 		JBrowse link
G Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO MGI:3805889 (PMID:24268575) RGD PMID:24268575 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712 		JBrowse link
G Prdm16 PR/SET domain 16 acts_upstream_of_or_within ISO MGI:2135565|MGI:5564782|MGI:95457 (PMID:24703692) RGD PMID:24703692 NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601 		JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) involved_in ISO (PMID:19345177) RGD PMID:19345177 NCBI chr 3:106,659,363...106,718,956
Ensembl chr 3:106,659,308...106,718,970 		JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:5568941 (PMID:24550110) RGD PMID:24550110 NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090 		JBrowse link
G Setd6 SET domain containing 6, protein lysine methyltransferase involved_in ISS
ISO		 GO_REF:0000024
(PMID:23324626)		 UniProt
RGD		 PMID:23324626 GO_REF:0000024 NCBI chr19:9,343,309...9,350,477
Ensembl chr19:9,347,458...9,350,453 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 acts_upstream_of_or_within ISO (PMID:20176728) RGD PMID:20176728 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smc3 structural maintenance of chromosomes 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20720539)		 Ensembl
RGD		 PMID:20720539 GO_REF:0000107 NCBI chr 1:252,601,422...252,644,522
Ensembl chr 1:252,601,753...252,644,522 		JBrowse link
G Smc5 structural maintenance of chromosomes 5 acts_upstream_of_or_within ISO MGI:5882566 (PMID:26919979) RGD PMID:26919979 NCBI chr 1:220,769,366...220,839,138
Ensembl chr 1:220,769,366...220,839,096 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO (PMID:23169531) RGD PMID:23169531 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Stag2 STAG2 cohesin complex component acts_upstream_of_or_within ISO (PMID:20720539) RGD PMID:20720539 NCBI chr  X:120,974,687...121,105,677
Ensembl chr  X:120,974,857...121,105,677 		JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:3769504 (PMID:18356246) RGD PMID:18356246 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708 		JBrowse link
G Tcf15 transcription factor 15 involved_in ISO (PMID:32669716) RGD PMID:32669716 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 involved_in ISO (PMID:19372391) RGD PMID:19372391 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052 		JBrowse link
G Tfap2c transcription factor AP-2 gamma acts_upstream_of_or_within ISO (PMID:20176728) RGD PMID:20176728 NCBI chr 3:161,315,114...161,322,998
Ensembl chr 3:161,315,031...161,322,995 		JBrowse link
G Tpt1 tumor protein, translationally-controlled 1 involved_in ISO (PMID:21076177) RGD PMID:21076177 NCBI chr15:51,156,728...51,159,629
Ensembl chr15:51,146,154...51,159,625 		JBrowse link
G Trim8 tripartite motif-containing 8 acts_upstream_of_or_within ISO (PMID:21689689) RGD PMID:21689689 NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513 		JBrowse link
G Tut4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) RGD PMID:19703396 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465 		JBrowse link
G Zic3 Zic family member 3 involved_in ISO (PMID:17267691) RGD PMID:17267691 NCBI chr  X:136,123,662...136,129,627
Ensembl chr  X:136,124,026...136,134,746 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    developmental process 7069
      maintenance of cell number 189
        skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration + 5
        stem cell population maintenance + 181
paths to the root