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ONTOLOGY REPORT - ANNOTATIONS


Term:glycinergic synapse
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Accession:GO:0098690 term browser browse the term
Definition:A synapse that uses glycine as a neurotransmitter.



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glycinergic synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef9 Cdc42 guanine nucleotide exchange factor 9 is_active_in IDA PMID:21681748 SynGO PMID:21681748 RGD:13702437 NCBI chr  X:59,919,560...60,077,538
Ensembl chr  X:59,920,870...60,077,513
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit is_active_in EXP
IDA
PMID:21762741 SynGO PMID:21762741 PMID:21762741 RGD:13702307, RGD:13702307 NCBI chr 1:116,711,559...116,837,269
Ensembl chr 1:116,714,711...116,837,240
JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta is_active_in IDA PMID:9870948 SynGO PMID:9870948 RGD:155230764 NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
JBrowse link
G Glra1 glycine receptor, alpha 1 is_active_in
located_in
IDA
ISO
IEA
PMID:25339867
(MGI:6092912|PMID:28724750)
GO_REF:0000107
RGD
Ensembl
PMID:28724750 PMID:25339867 GO_REF:0000107 MGI:6092912, RGD:13702401 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162
JBrowse link
G Glra2 glycine receptor, alpha 2 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:5292176|PMID:19528249)
Ensembl
RGD
PMID:19528249 GO_REF:0000107 MGI:5292176 NCBI chr  X:29,020,377...29,241,666
Ensembl chr  X:29,020,557...29,241,666
JBrowse link
G Glra3 glycine receptor, alpha 3 is_active_in IDA
ISO
PMID:22574341
(MGI:5770489|PMID:26851771)
RGD PMID:26851771 PMID:22574341 MGI:5770489, RGD:13702330 NCBI chr16:34,199,937...34,848,773
Ensembl chr16:34,204,811...34,848,753
JBrowse link
G Glra4 glycine receptor alpha 4 is_active_in ISO (MGI:6189676|PMID:17154252) RGD PMID:17154252 MGI:6189676 NCBI chr  X:100,110,517...100,131,042
Ensembl chr  X:100,110,517...100,131,042
JBrowse link
G Glrb glycine receptor, beta is_active_in IDA
ISO
PMID:22592841
(MGI:3623689|PMID:16672662)
RGD PMID:16672662 PMID:22592841 MGI:3623689, RGD:13702311 NCBI chr 2:166,134,616...166,207,498
Ensembl chr 2:166,134,626...166,207,489
JBrowse link
G Gphn gephyrin is_active_in IDA
IMP
PMID:8264797
PMID:9714149
SynGO PMID:8264797 PMID:9714149 PMID:8264797 RGD:13702318, RGD:13702207, RGD:13702318 NCBI chr 6:96,954,365...97,483,617
Ensembl chr 6:96,892,148...97,483,612
JBrowse link
G Haus8l2 HAUS augmin-like complex, subunit 8 like 2 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 is_active_in
located_in
EXP
IMP
IDA
ISO
IEA
PMID:21209184
(MGI:4881567|PMID:21209184)
GO_REF:0000107
RGD
Ensembl
PMID:21209184 PMID:21209184 PMID:21209184 PMID:21209184 GO_REF:0000107 MGI:4881567, RGD:13702189, RGD:13702189, RGD:13702189 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Iqsec3 IQ motif and Sec7 domain ArfGEF 3 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:4946863|PMID:21198641)
Ensembl
RGD
PMID:21198641 GO_REF:0000107 MGI:4946863 NCBI chr 4:154,610,933...154,707,310
Ensembl chr 4:154,610,934...154,707,310
JBrowse link
G Itgb1 integrin subunit beta 1 is_active_in EXP
IDA
PMID:20935643 SynGO PMID:20935643 PMID:20935643 RGD:155230798, RGD:155230798 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb3 integrin subunit beta 3 is_active_in IDA
EXP
PMID:20935643 SynGO PMID:20935643 PMID:20935643 RGD:155230798, RGD:155230798 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 is_active_in IDA PMID:15207333 SynGO PMID:15207333 RGD:10411903 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233
JBrowse link
G Nlgn2 neuroligin 2 located_in
is_active_in
IEA
ISO
GO_REF:0000107
(MGI:4411943|PMID:19755106)
Ensembl
RGD
PMID:19755106 GO_REF:0000107 MGI:4411943 NCBI chr10:54,544,461...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nppa natriuretic peptide A is_active_in IMP
IDA
EXP
PMID:24060848 SynGO PMID:24060848 PMID:24060848 PMID:24060848 RGD:155230794, RGD:155230794, RGD:155230794 NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351
JBrowse link
G Slc6a5 solute carrier family 6 member 5 is_active_in IDA
ISO
IEP
PMID:19374720
PMID:7751957
(MGI:2680878|PMID:14622583), (MGI:5912864|PMID:23486948)
RGD PMID:14622583 PMID:23486948 PMID:19374720 PMID:7751957 PMID:19374720 MGI:2680878 MGI:5912864, RGD:13702296, RGD:13702203, RGD:13702296 NCBI chr 1:99,645,389...99,697,016
Ensembl chr 1:99,645,389...99,697,010
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21306
    cellular anatomical entity 21146
      cell junction 2376
        synapse 1744
          glycinergic synapse 18
paths to the root