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ONTOLOGY REPORT - ANNOTATIONS


Term:lumenal side of membrane
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Accession:GO:0098576 term browser browse the term
Definition:Any side (leaflet) of a membrane that faces the lumen of an organelle.



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lumenal side of membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp2 aquaporin 2 located_in IEA
ISO
GO_REF:0000107
(MGI:3843596|PMID:17409310)
Ensembl
RGD
PMID:17409310 GO_REF:0000107 MGI:3843596 NCBI chr 7:130,711,433...130,716,468
Ensembl chr 7:130,711,413...130,716,468
JBrowse link
integral component of lumenal side of endoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENSRNOG00000069480 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr20:3,310,825...3,421,372 JBrowse link
G Hm13 histocompatibility minor 13 located_in
is_active_in
ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547 PMID:21873635 RGD:13792537 NCBI chr 3:141,145,769...141,184,703
Ensembl chr 3:141,145,782...141,184,703
JBrowse link
G LOC120093125 H-2 class I histocompatibility antigen, Q7 alpha chain-like located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,624,073...2,658,023 JBrowse link
G Pkd2 polycystin 2, transient receptor potential cation channel located_in ISO (PMID:21044049) RGD PMID:21044049 NCBI chr14:5,237,135...5,280,455
Ensembl chr14:5,237,135...5,280,825
JBrowse link
G RT1-A1 RT1 class Ia, locus A1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:4,905,309...4,914,593 JBrowse link
G RT1-A2 RT1 class Ia, locus A2 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:4,870,939...4,910,183 JBrowse link
G RT1-CE1 RT1 class I, locus1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,555,779...3,559,487
Ensembl chr20:3,555,782...3,559,486
JBrowse link
G RT1-CE11 RT1 class I, locus CE11 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,355,547...3,358,500
Ensembl chr20:3,350,937...3,380,362
JBrowse link
G RT1-CE16 RT1 class I, locus CE16 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,257,752...3,260,683
Ensembl chr20:3,257,123...3,279,563
JBrowse link
G RT1-CE2 RT1 class I, locus CE2 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,538,452...3,541,841
Ensembl chr20:3,537,809...3,541,790
JBrowse link
G RT1-CE3 RT1 class I, locus CE3 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:3,516,647...3,520,938
Ensembl chr20:2,623,953...2,692,081
JBrowse link
G RT1-M3-1 RT1 class Ib, locus M3, gene 1 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
JBrowse link
G RT1-S2 RT1 class Ib, locus S2 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,650,233...2,651,654
Ensembl chr20:2,649,964...2,652,027
JBrowse link
G RT1-T24-4 RT1 class I, locus T24, gene 4 located_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr20:2,684,515...2,692,515
NCBI chr20:2,684,559...2,743,176
Ensembl chr20:2,684,515...2,692,511
JBrowse link
G Sppl2a signal peptide peptidase-like 2A located_in
is_active_in
ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547 PMID:21873635 RGD:13792537 NCBI chr 3:114,149,337...114,193,408
Ensembl chr 3:114,151,069...114,193,264
JBrowse link
G Sppl2b signal peptide peptidase-like 2B located_in
is_active_in
ISO
IBA
ISS
(PMID:15385547)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15385547 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:8,843,918...8,856,642
Ensembl chr 7:8,843,918...8,856,608
JBrowse link
G Sppl2c signal peptide peptidase like 2C located_in
is_active_in
ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547 PMID:21873635 RGD:13792537 NCBI chr10:89,095,254...89,097,487
Ensembl chr10:89,095,261...89,098,580
JBrowse link
G Sppl3 signal peptide peptidase like 3 located_in
is_active_in
ISO
IBA
(PMID:15385547)
PMID:21873635
RGD PMID:15385547 PMID:21873635 RGD:13792537 NCBI chr12:41,515,635...41,600,079
Ensembl chr12:41,515,640...41,600,126
JBrowse link
lumenal side of Golgi membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucb1 nucleobindin 1 IDA RGD PMID:9647645 RGD:9831131 NCBI chr 1:95,968,325...95,999,183
Ensembl chr 1:95,968,326...96,003,220
JBrowse link
matrix side of mitochondrial inner membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdh1 3-hydroxybutyrate dehydrogenase 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:69,302,534...69,343,173
Ensembl chr11:69,302,534...69,337,671
JBrowse link
G Coa8 cytochrome c oxidase assembly factor 8 located_in ISS
ISO
GO_REF:0000024
(PMID:30552096)
UniProt
RGD
PMID:30552096 GO_REF:0000024 NCBI chr 6:130,772,218...130,797,081
Ensembl chr 6:130,771,199...130,797,081
JBrowse link
G Dmd dystrophin IDA RGD PMID:10913331 RGD:12880018 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 located_in ISO (MGI:5604945|PMID:24856930) RGD PMID:24856930 MGI:5604945 NCBI chr 2:116,923,272...116,945,312
Ensembl chr 2:116,923,272...116,945,264
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19309
    cellular anatomical entity 19051
      side of membrane 751
        lumenal side of membrane 24
          lumenal side of Golgi membrane 1
          lumenal side of endoplasmic reticulum membrane + 18
          lumenal side of endosome membrane + 0
          lumenal side of lysosomal membrane 0
          lumenal side of transport vesicle membrane + 0
          matrix side of mitochondrial inner membrane + 4
Path 2
Term Annotations click to browse term
  cellular_component 19309
    cellular anatomical entity 19051
      organelle 12937
        membrane-bounded organelle 11645
          organelle membrane 2921
            lumenal side of membrane 24
              lumenal side of Golgi membrane 1
              lumenal side of endoplasmic reticulum membrane + 18
              lumenal side of endosome membrane + 0
              lumenal side of lysosomal membrane 0
              lumenal side of transport vesicle membrane + 0
              matrix side of mitochondrial inner membrane + 4
paths to the root