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ONTOLOGY REPORT - ANNOTATIONS


Term:ATPase dependent transmembrane transport complex
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Accession:GO:0098533 term browser browse the term
Definition:A transmembrane protein complex that functions in ATPase dependent active transport across a membrane.
Comment:The location of this complex is implicit in its activity, so its location is asserted as a regular relationship rather than as a part of an intersection.



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ATP-binding cassette (ABC) transporter complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb9 ATP binding cassette subfamily B member 9 TAS RGD PMID:14709908 RGD:1357429 NCBI chr12:32,499,225...32,531,932
Ensembl chr12:32,499,225...32,531,931
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 part_of ISO
ISS
(PMID:16893193), (PMID:27144356)
GO_REF:0000024
RGD
UniProt
PMID:16893193 PMID:27144356 GO_REF:0000024 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 part_of ISS
ISO
GO_REF:0000024
(PMID:16893193), (PMID:27144356)
UniProt
RGD
PMID:16893193 PMID:27144356 GO_REF:0000024 NCBI chr 6:9,945,629...9,964,912
Ensembl chr 6:9,945,629...9,964,912
JBrowse link
calcium ion-transporting ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 part_of ISO (PMID:16402920) RGD PMID:16402920 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Pln phospholamban part_of ISO (PMID:19708671) RGD PMID:19708671 NCBI chr20:32,629,537...32,639,559 JBrowse link
cation-transporting ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc9a1 solute carrier family 9 member A1 part_of ISO (PMID:24840010) RGD PMID:24840010 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
potassium ion-transporting ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 part_of RCA PMID:28842488 ARUK-UCL PMID:28842488 RGD:14995313 NCBI chr 1:96,598,663...96,679,495
Ensembl chr 1:96,598,647...96,679,510
JBrowse link
G Abcc9 ATP binding cassette subfamily C member 9 part_of RCA PMID:28842488 ARUK-UCL PMID:28842488 RGD:14995313 NCBI chr 4:175,531,854...175,655,849
Ensembl chr 4:175,532,547...175,655,356
JBrowse link
G Abcc9_v1 ATP binding cassette subfamily C member 9, variant 1 part_of RCA PMID:28842488 ARUK-UCL PMID:28842488 RGD:14995313
G Abcc9_v2 ATP binding cassette subfamily C member 9, variant 2 part_of RCA PMID:28842488 ARUK-UCL PMID:28842488 RGD:14995313
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 part_of RCA PMID:28842488 ARUK-UCL PMID:28842488 RGD:14995313 NCBI chr 4:175,508,908...175,515,829
Ensembl chr 4:175,508,912...175,515,603
JBrowse link
sodium:potassium-exchanging ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 part_of IDA
ISO
PMID:28787093
UniProtKB:P05027 (PMID:18052210), (PMID:18075585), (PMID:19542013)
UniProtKB:P05027 (PMID:10636900), (PMID:18052210), (PMID:19542013)
RGD PMID:10636900 PMID:18052210 PMID:18075585 PMID:19542013 PMID:16893515 More... RGD:1581763, RGD:14995309, RGD:2302992, RGD:631775 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 part_of IDA
ISO
PMID:28787093
UniProtKB:P05026|UniProtKB:P05027 (PMID:10636900), (PMID:18052210), (PMID:18728015), (PMID:23954377)
RGD PMID:10636900 PMID:18052210 PMID:18728015 PMID:23954377 PMID:12093728 More... RGD:631775, RGD:14995309, RGD:2302992 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 part_of IDA
ISO
NAS
(MGI:4352602|PMID:19376779)
(PMID:10636900)
PMID:26224839
RGD PMID:10636900 PMID:19376779 PMID:12093728 PMID:26224839 MGI:4352602, RGD:631775, RGD:11576284 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918
JBrowse link
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 part_of TAS
ISO
UniProtKB:P05026|UniProtKB:P54709 (PMID:16861705) RGD PMID:16861705 PMID:12112599 RGD:728364 NCBI chr13:84,683,766...84,719,790
Ensembl chr13:84,683,768...84,719,687
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 part_of IDA
ISO
IEA
IBA
(MGI:4359299|PMID:19683723)
UniProtKB:P05024 (PMID:18052210), (PMID:18075585), (PMID:19542013)
UniProtKB:P50993|UniProtKB:Q13733 (PMID:10636900), (PMID:16861705), (PMID:18728015), (PMID:19542013), (PMID:23954377)
PMID:28787093
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:10636900 PMID:16861705 PMID:18052210 PMID:18075585 PMID:18728015 More... GO_REF:0000002 MGI:4359299, RGD:2302992, RGD:14995309, RGD:13792537 NCBI chr13:76,786,580...76,807,096
Ensembl chr13:76,786,578...76,807,459
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 part_of ISO
IBA
IEA
IDA
(PMID:10636900), (PMID:19542013)
PMID:21873635
GO_REF:0000107
PMID:28787093
RGD
Ensembl
PMID:10636900 PMID:19542013 PMID:21873635 PMID:28787093 GO_REF:0000107, RGD:13792537, RGD:14995309 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933
JBrowse link
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 part_of IDA
IBA
ISO
PMID:21873635
UniProtKB:Q13733 (PMID:10636900), (PMID:16861705), (PMID:19542013)
RGD PMID:10636900 PMID:16861705 PMID:19542013 PMID:16624992 PMID:21873635 RGD:2302992, RGD:13792537 NCBI chr 8:96,910,265...96,941,592
Ensembl chr 8:96,910,309...96,941,598
JBrowse link
G Atp1b4 ATPase Na+/K+ transporting family member beta 4 part_of IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:117,087,284...117,108,023
Ensembl chr  X:117,057,423...117,108,020
JBrowse link
G Atp4b ATPase H+/K+ transporting subunit beta part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:76,144,150...76,153,063
Ensembl chr16:76,144,150...76,153,063
JBrowse link
G Fxyd1 FXYD domain-containing ion transport regulator 1 part_of ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:86,287,163...86,291,478
Ensembl chr 1:86,287,165...86,291,278
JBrowse link
G Fxyd2 FXYD domain-containing ion transport regulator 2 IDA RGD PMID:12626497 RGD:1598991 NCBI chr 8:45,712,887...45,720,032
Ensembl chr 8:45,712,903...45,720,203
JBrowse link
G Fxyd4 FXYD domain-containing ion transport regulator 4 IDA RGD PMID:12626497 RGD:1598991 NCBI chr 4:151,109,779...151,113,659
Ensembl chr 4:151,109,779...151,113,637
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20016
    protein-containing complex 6014
      transporter complex 416
        transmembrane transporter complex 401
          ATPase dependent transmembrane transport complex 23
            ATP-binding cassette (ABC) transporter complex + 3
            cation-transporting ATPase complex + 20
Path 2
Term Annotations click to browse term
  cellular_component 20016
    cellular anatomical entity 19722
      membrane 9930
        intrinsic component of membrane 6741
          integral component of membrane 6594
            transmembrane transporter complex 401
              ATPase dependent transmembrane transport complex 23
                ATP-binding cassette (ABC) transporter complex + 3
                cation-transporting ATPase complex + 20
paths to the root