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ONTOLOGY REPORT - ANNOTATIONS

Term:9+0 non-motile cilium
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Accession:GO:0097731 term browser browse the term
Definition:A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets but no central microtubules (and is therefore called a 9+0 axoneme).
Comment:This type of cilia may be present in solitary (authentic primary cilia in many cell types) or in multiple copies (e.g. in Grueneberg ganglion neurons).
Synonyms:exact_synonym: 9+0 immotile cilium
 narrow_synonym: primary cilium

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9+0 non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynll2 dynein light chain LC8-type 2 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr10:75,262,536...75,281,302
Ensembl chr10:75,262,537...75,270,561 		JBrowse link
G Ift80 intraflagellar transport 80 part_of ISO
IEA		 (MGI:5807019|PMID:26996322)
GO_REF:0000107		 RGD
Ensembl		 PMID:26996322 GO_REF:0000107 MGI:5807019 NCBI chr 2:165,506,878...165,600,748
Ensembl chr 2:165,505,810...165,600,748 		JBrowse link
G Iftap intraflagellar transport associated protein located_in
part_of		 ISO
IBA		 (MGI:5807035|PMID:26703212)
PMID:21873635		 RGD PMID:26703212, PMID:21873635, PMID:21873635 MGI:5807035, RGD:13792537, RGD:13792537 NCBI chr 3:91,086,186...91,195,981
Ensembl chr 3:91,086,186...91,195,981 		JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr17:77,287,580...77,304,482
Ensembl chr17:77,287,188...77,304,530 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin located_in ISO (MGI:5604763|PMID:24586199) RGD PMID:24586199 MGI:5604763 NCBI chr 9:26,164,969...26,736,704 JBrowse link
G RGD1310587 similar to hypothetical protein FLJ14146 located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr13:102,780,885...102,790,621
Ensembl chr13:102,780,877...102,790,639 		JBrowse link
G RGD1564308 similar to LOC495042 protein located_in ISO (PMID:29257953) RGD PMID:29257953 NCBI chr16:49,485,022...49,509,756
Ensembl chr16:49,485,256...49,509,767 		JBrowse link
G Smo smoothened, frizzled class receptor part_of
located_in		 ISO
IEA		 (MGI:5807019|PMID:26996322)
GO_REF:0000107		 RGD
Ensembl		 PMID:26996322 GO_REF:0000107 MGI:5807019 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770 		JBrowse link
G Ttll4 tubulin tyrosine ligase like 4 part_of ISO
IEA		 (MGI:3771321|PMID:17499049)
GO_REF:0000107		 RGD
Ensembl		 PMID:17499049 GO_REF:0000107 MGI:3771321 NCBI chr 9:81,925,363...81,961,882
Ensembl chr 9:81,940,630...81,954,686 		JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 part_of ISO (MGI:3771321|PMID:17499049) RGD PMID:17499049 MGI:3771321 NCBI chr 6:109,693,915...109,910,479
Ensembl chr 6:109,710,781...109,879,607 		JBrowse link
G Ttll6 tubulin tyrosine ligase like 6 part_of ISO
IEA		 (MGI:3771321|PMID:17499049)
GO_REF:0000107		 RGD
Ensembl		 PMID:17499049 GO_REF:0000107 MGI:3771321 NCBI chr10:83,954,221...83,999,542
Ensembl chr10:83,954,279...83,999,710 		JBrowse link
G Ttll7 tubulin tyrosine ligase like 7 part_of ISO (MGI:3771321|PMID:17499049) RGD PMID:17499049 MGI:3771321 NCBI chr 2:252,779,741...252,854,746
Ensembl chr 2:252,771,017...252,850,495 		JBrowse link
G Tulp3 TUB like protein 3 part_of ISO (PMID:20889716) RGD PMID:20889716 NCBI chr 4:161,636,084...161,677,807
Ensembl chr 4:161,637,892...161,658,519 		JBrowse link
cone photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guca1a guanylate cyclase activator 1A located_in ISO (PMID:9620085)
(MGI:6437034|PMID:9620085)		 RGD PMID:9620085 MGI:6437034 NCBI chr 9:15,609,804...15,620,030
Ensembl chr 9:15,609,804...15,620,029 		JBrowse link
G Guca1b guanylate cyclase activator 1B located_in ISO (PMID:9620085) RGD PMID:9620085 NCBI chr 9:15,621,083...15,629,017
Ensembl chr 9:15,621,083...15,629,017 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO (MGI:4867355|PMID:21078983) RGD PMID:21078983 MGI:4867355 NCBI chr13:110,739,645...110,749,167
Ensembl chr13:110,743,098...110,748,365 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (MGI:4830641|PMID:20375344) RGD PMID:20375344 MGI:4830641 NCBI chr 9:65,882,063...65,917,424
Ensembl chr 9:65,882,054...65,917,132 		JBrowse link
photoreceptor cell cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO (PMID:26373354) RGD PMID:26373354 NCBI chr13:90,605,792...90,642,032
Ensembl chr13:90,605,794...90,641,772 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr20:11,417,428...11,424,301
Ensembl chr20:11,417,429...11,424,324 		JBrowse link
G Fam161a FAM161 centrosomal protein A located_in ISO (MGI:5438885|PMID:22791751) RGD PMID:22791751 MGI:5438885 NCBI chr14:107,785,029...107,803,765
Ensembl chr14:107,785,029...107,798,115 		JBrowse link
G Ift52 intraflagellar transport 52 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 3:159,388,868...159,413,358
Ensembl chr 3:159,392,193...159,413,575 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 located_in ISO
ISS		 (PMID:26593283)
(MGI:5816430|PMID:26593283)
GO_REF:0000024		 RGD
UniProt		 PMID:26593283 GO_REF:0000024 MGI:5816430 NCBI chr 9:16,568,743...16,580,900
Ensembl chr 9:16,566,688...16,581,078 		JBrowse link
G Rp1 RP1, axonemal microtubule associated part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508 		JBrowse link
G Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr13:94,888,046...95,100,833
Ensembl chr13:94,888,078...95,112,033 		JBrowse link
photoreceptor connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrv1 adhesion G protein-coupled receptor V1 located_in ISO (MGI:3774983|PMID:17906286) RGD PMID:17906286 MGI:3774983 NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134 		JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 located_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:12417528)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:12417528 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:266,287,015...266,333,099
Ensembl chr 1:266,287,017...266,333,105 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (MGI:3624140|PMID:16632484), (MGI:3653539|PMID:16682973), (MGI:5525015|PMID:23943788) RGD PMID:16632484 PMID:16682973 PMID:23943788 MGI:3624140 MGI:3653539 MGI:5525015 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327 		JBrowse link
G Cetn1 centrin 1 located_in ISO (MGI:3525432|PMID:15347651), (MGI:6393223|PMID:30120214) RGD PMID:15347651 PMID:30120214 MGI:3525432 MGI:6393223 NCBI chr18:785,972...786,674
Ensembl chr18:785,972...786,674 		JBrowse link
G Cetn2 centrin 2 located_in ISO (MGI:3525432|PMID:15347651) RGD PMID:15347651 MGI:3525432 NCBI chr  X:152,927,852...152,933,095
Ensembl chr  X:152,927,718...152,932,953 		JBrowse link
G Cetn3 centrin 3 located_in ISO (MGI:3525432|PMID:15347651), (MGI:5303017|PMID:22031837), (MGI:5588761|PMID:24833722) RGD PMID:15347651 PMID:22031837 PMID:24833722 MGI:3525432 MGI:5303017 MGI:5588761 NCBI chr 2:12,101,473...12,115,009
Ensembl chr 2:12,102,487...12,115,009 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO (MGI:5770162|PMID:26974433) RGD PMID:26974433 MGI:5770162 NCBI chr20:11,417,428...11,424,301
Ensembl chr20:11,417,429...11,424,324 		JBrowse link
G Fam161a FAM161 centrosomal protein A located_in
part_of		 IDA
ISO
IBA		 PMID:22940612
(MGI:5438885|PMID:22791751), (MGI:5442623|PMID:22940612), (MGI:5588761|PMID:24833722)
(PMID:22940612)
PMID:21873635		 RGD PMID:22791751 PMID:22940612 PMID:24833722, PMID:22940612, PMID:21873635, PMID:22940612, PMID:21873635 MGI:5438885 MGI:5442623 MGI:5588761, RGD:8553427, RGD:13792537, RGD:8553427, RGD:13792537 NCBI chr14:107,785,029...107,803,765
Ensembl chr14:107,785,029...107,798,115 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in ISO (MGI:3757777|PMID:17881533) RGD PMID:17881533 MGI:3757777 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038 		JBrowse link
G Ift122 intraflagellar transport 122 located_in ISO (MGI:3839506|PMID:19208653) RGD PMID:19208653 MGI:3839506 NCBI chr 4:147,756,574...147,826,983
Ensembl chr 4:147,756,553...147,826,997 		JBrowse link
G Ift140 intraflagellar transport 140 located_in ISO (MGI:4460838|PMID:20368623), (MGI:5604762|PMID:24619649) RGD PMID:20368623 PMID:24619649 MGI:4460838 MGI:5604762 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (MGI:5317282|PMID:21307337) RGD PMID:21307337 MGI:5317282 NCBI chr10:65,805,808...65,811,353
Ensembl chr10:65,805,860...65,811,351 		JBrowse link
G Ift52 intraflagellar transport 52 located_in ISO (MGI:4460838|PMID:20368623) RGD PMID:20368623 MGI:4460838 NCBI chr 3:159,388,868...159,413,358
Ensembl chr 3:159,392,193...159,413,575 		JBrowse link
G Ift57 intraflagellar transport 57 located_in ISO (MGI:4460838|PMID:20368623) RGD PMID:20368623 MGI:4460838 NCBI chr11:53,664,638...53,731,779
Ensembl chr11:53,664,638...53,731,779 		JBrowse link
G Ift88 intraflagellar transport 88 located_in ISO (MGI:3839506|PMID:19208653), (MGI:4460838|PMID:20368623) RGD PMID:19208653 PMID:20368623 MGI:3839506 MGI:4460838 NCBI chr15:37,690,417...37,786,855
Ensembl chr15:37,691,345...37,784,924 		JBrowse link
G Iqcb1 IQ motif containing B1 located_in ISO (PMID:15723066)
(MGI:3763297|PMID:15723066)		 RGD PMID:15723066 MGI:3763297 NCBI chr11:66,824,059...66,878,585
Ensembl chr11:66,824,065...66,878,551 		JBrowse link
G Kif17 kinesin family member 17 located_in ISO (MGI:4353477|PMID:19384852) RGD PMID:19384852 MGI:4353477 NCBI chr 5:156,628,409...156,665,752
Ensembl chr 5:156,628,432...156,666,284 		JBrowse link
G Kif3a kinesin family member 3a located_in ISO (MGI:3839506|PMID:19208653) RGD PMID:19208653 MGI:3839506 NCBI chr10:38,918,705...38,953,958
Ensembl chr10:38,918,748...38,952,785 		JBrowse link
G Kifap3 kinesin-associated protein 3 located_in ISO (MGI:4353477|PMID:19384852) RGD PMID:19384852 MGI:4353477 NCBI chr13:82,072,497...82,217,256
Ensembl chr13:82,072,497...82,217,252 		JBrowse link
G Lca5 lebercilin LCA5 located_in IDA
ISO		 PMID:17546029
(MGI:5050784|PMID:21606596)
(PMID:21606596)		 RGD PMID:21606596, PMID:17546029, PMID:17546029 MGI:5050784, RGD:14397561, RGD:14397561 NCBI chr 8:90,926,309...90,984,271
Ensembl chr 8:90,926,311...90,984,224 		JBrowse link
G Mak male germ cell-associated kinase located_in ISO (MGI:5298333|PMID:21148103) RGD PMID:21148103 MGI:5298333 NCBI chr17:21,531,651...21,567,742
Ensembl chr17:21,521,505...21,568,440 		JBrowse link
G Myo7a myosin VIIA located_in ISO (MGI:1343017|PMID:10414956) RGD PMID:10414956 MGI:1343017 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508 		JBrowse link
G Nphp1 nephrocystin 1 located_in ISO (MGI:4821072|PMID:16885411) RGD PMID:16885411 MGI:4821072 NCBI chr 3:120,316,048...120,370,089
Ensembl chr 3:120,316,047...120,373,500 		JBrowse link
G Nphp4 nephrocystin 4 located_in ISO (MGI:4867588|PMID:21078623) RGD PMID:21078623 MGI:4867588 NCBI chr 5:169,647,581...169,744,662
Ensembl chr 5:169,659,188...169,744,660 		JBrowse link
G Pcdhb22 protocadherin beta 22 located_in ISO (MGI:3775581|PMID:18279309) RGD PMID:18279309 MGI:3775581 NCBI chr18:30,590,864...30,595,456
Ensembl chr18:30,592,794...30,595,181 		JBrowse link
G Pdzd7 PDZ domain containing 7 colocalizes_with IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,776,393...264,796,206
Ensembl chr 1:264,776,398...264,794,938 		JBrowse link
G RGD1306271 similar to KIAA1549 protein located_in ISO (MGI:6393223|PMID:30120214) RGD PMID:30120214 MGI:6393223 NCBI chr 4:65,834,933...65,962,722
Ensembl chr 4:65,834,035...65,962,539 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in
part_of		 ISO (PMID:11767049)
(MGI:2156902|PMID:11773008), (MGI:2676521|PMID:14507858)		 RGD PMID:11767049 PMID:11773008 PMID:14507858 MGI:2156902 MGI:2676521 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508 		JBrowse link
G Rp1l1 RP1 like 1 located_in ISO (MGI:4353917|PMID:19657028) RGD PMID:19657028 MGI:4353917 NCBI chr15:47,344,380...47,384,461
Ensembl chr15:47,373,120...47,383,508 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in ISO (MGI:1354839|PMID:10725384) RGD PMID:10725384 MGI:1354839 NCBI chr  X:14,271,012...14,331,745
Ensembl chr  X:14,271,017...14,331,486 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 located_in ISO (MGI:5608598|PMID:25398945) RGD PMID:25398945 MGI:5608598 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737 		JBrowse link
G Rpgrip1l Rpgrip1-like part_of IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:17558407, PMID:21873635, PMID:21873635 RGD:11537356, RGD:13792537, RGD:13792537 NCBI chr19:17,115,266...17,208,055
Ensembl chr19:17,115,412...17,208,055 		JBrowse link
G Septin2 septin 2 located_in ISO (PMID:23572511) RGD PMID:23572511 NCBI chr 9:100,624,876...100,658,053
Ensembl chr 9:100,624,876...100,658,050 		JBrowse link
G Spata7 spermatogenesis associated 7 located_in ISS
ISO		 GO_REF:0000024
(MGI:5608598|PMID:25398945)		 UniProt
RGD		 PMID:25398945 GO_REF:0000024 MGI:5608598 NCBI chr 6:122,603,248...122,648,718
Ensembl chr 6:122,603,269...122,648,699 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 part_of ISO (PMID:23704327) RGD PMID:23704327 NCBI chr 3:111,833,411...111,875,551 JBrowse link
G Tbcc tubulin folding cofactor C located_in ISO (PMID:12417528) RGD PMID:12417528 NCBI chr 9:16,405,187...16,406,338
Ensembl chr 9:16,405,185...16,406,338 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (MGI:4830641|PMID:20375344) RGD PMID:20375344 MGI:4830641 NCBI chr 9:65,882,063...65,917,424
Ensembl chr 9:65,882,054...65,917,132 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase located_in
part_of		 ISO
IBA		 (PMID:21159800)
(MGI:4939557|PMID:21159800)
PMID:21873635		 RGD PMID:21159800, PMID:21873635, PMID:21873635 MGI:4939557, RGD:13792537, RGD:13792537 NCBI chr 5:56,554,956...56,566,503
Ensembl chr 5:56,554,969...56,567,320 		JBrowse link
G Tsga10ip testis specific 10 interacting protein part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 1:220,772,592...220,786,952
Ensembl chr 1:220,772,411...220,787,238 		JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 located_in ISO (MGI:2677624|PMID:14520415) RGD PMID:14520415 MGI:2677624 NCBI chr 6:122,920,308...122,974,525
Ensembl chr 6:122,920,317...122,974,522 		JBrowse link
G Ush1c USH1 protein network component harmonin colocalizes_with IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459 		JBrowse link
G Ush1g USH1 protein network component sans located_in ISO (MGI:3774983|PMID:17906286) RGD PMID:17906286 MGI:3774983 NCBI chr10:103,866,566...103,873,416
Ensembl chr10:103,869,377...103,873,246 		JBrowse link
G Ush2a usherin colocalizes_with
located_in		 IDA
ISO		 (MGI:3774983|PMID:17906286), (MGI:4950337|PMID:21212183) RGD PMID:17906286 PMID:21212183, PMID:16434480 MGI:3774983 MGI:4950337, RGD:1600128 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329 		JBrowse link
G Wdr19 WD repeat domain 19 located_in ISO (MGI:3839506|PMID:19208653) RGD PMID:19208653 MGI:3839506 NCBI chr14:44,705,012...44,767,120
Ensembl chr14:44,705,012...44,767,120 		JBrowse link
G Whrn whirlin colocalizes_with
located_in		 IDA
ISO
IEA
IBA		 (MGI:3774983|PMID:17906286), (MGI:4950337|PMID:21212183)
GO_REF:0000107
PMID:21873635		 RGD
Ensembl		 PMID:17906286 PMID:21212183, PMID:16434480, PMID:21873635 GO_REF:0000107 MGI:3774983 MGI:4950337, RGD:1600128, RGD:13792537 NCBI chr 5:79,235,541...79,317,206
Ensembl chr 5:79,234,950...79,317,206 		JBrowse link
photoreceptor disc membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rho rhodopsin located_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:25664179)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:25664179 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298 		JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 part_of ISO (PMID:23704327) RGD PMID:23704327 NCBI chr 3:111,833,411...111,875,551 JBrowse link
photoreceptor distal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769 		JBrowse link
G Cep290 centrosomal protein 290 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327 		JBrowse link
G Nphp1 nephrocystin 1 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 3:120,316,048...120,370,089
Ensembl chr 3:120,316,047...120,373,500 		JBrowse link
G Nphp4 nephrocystin 4 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 5:169,647,581...169,744,662
Ensembl chr 5:169,659,188...169,744,660 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr  X:14,271,012...14,331,745
Ensembl chr  X:14,271,017...14,331,486 		JBrowse link
G Rpgrip1 RPGR interacting protein 1 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr15:28,521,287...28,575,046
Ensembl chr15:28,522,737...28,574,737 		JBrowse link
G Spata7 spermatogenesis associated 7 part_of
located_in		 IEA
ISO
IBA		 GO_REF:0000107
MGI:5660490 (MGI:6194004|PMID:29899041)
PMID:21873635		 Ensembl
RGD		 PMID:29899041, PMID:21873635, PMID:21873635 GO_REF:0000107 MGI:6194004, RGD:13792537, RGD:13792537 NCBI chr 6:122,603,248...122,648,718
Ensembl chr 6:122,603,269...122,648,699 		JBrowse link
photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 located_in ISO (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 2:225,645,539...225,783,288
Ensembl chr 2:225,645,568...225,783,287 		JBrowse link
G Ahi1 Abelson helper integration site 1 located_in ISO (MGI:4461813|PMID:20592197) RGD PMID:20592197 MGI:4461813 NCBI chr 1:16,478,127...16,601,769
Ensembl chr 1:16,478,127...16,601,769 		JBrowse link
G Arr3 arrestin 3 located_in IEA
ISO		 GO_REF:0000044
(MGI:1354839|PMID:10725384), (MGI:3616100|PMID:12486395)		 UniProt
RGD		 PMID:10725384 PMID:12486395 GO_REF:0000044 MGI:1354839 MGI:3616100 NCBI chr  X:70,438,590...70,452,140
Ensembl chr  X:70,438,617...70,452,067 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 located_in ISO (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 located_in ISO (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 2:123,283,402...123,322,991
Ensembl chr 2:123,283,388...123,323,170 		JBrowse link
G Bsg basigin (Ok blood group) located_in ISS
ISO		 GO_REF:0000024
(MGI:6436439|PMID:25957687)		 UniProt
RGD		 PMID:25957687 GO_REF:0000024 MGI:6436439 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753 		JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F IDA RGD PMID:11526344 RGD:632484 NCBI chr  X:15,712,709...15,741,135
Ensembl chr  X:15,712,713...15,741,103 		JBrowse link
G Cep250 centrosomal protein 250 located_in ISO (MGI:6254746|PMID:28005958) RGD PMID:28005958 MGI:6254746 NCBI chr 3:151,508,366...151,544,631
Ensembl chr 3:151,508,361...151,544,674 		JBrowse link
G Cep290 centrosomal protein 290 located_in ISO (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327 		JBrowse link
G Cerkl ceramide kinase-like located_in ISO (MGI:5571037|PMID:23142158) RGD PMID:23142158 MGI:5571037 NCBI chr 3:66,268,835...66,395,615
Ensembl chr 3:66,268,947...66,394,764 		JBrowse link
G Cfap410 cilia and flagella associated protein 410 located_in ISO (PMID:27548899) RGD PMID:27548899 NCBI chr20:11,417,428...11,424,301
Ensembl chr20:11,417,429...11,424,324 		JBrowse link
G Cib2 calcium and integrin binding family member 2 located_in ISS
ISO		 GO_REF:0000024
(MGI:5487486|PMID:23023331)		 UniProt
RGD		 PMID:23023331 GO_REF:0000024 MGI:5487486 NCBI chr 8:59,123,078...59,139,946
Ensembl chr 8:59,123,079...59,139,946 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in ISO (MGI:1354839|PMID:10725384), (MGI:3527312|PMID:15634774), (MGI:4461813|PMID:20592197) RGD PMID:10725384 PMID:15634774 PMID:20592197 MGI:1354839 MGI:3527312 MGI:4461813 NCBI chr14:38,155,771...38,171,107
Ensembl chr14:38,155,759...38,171,010 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 located_in ISO (MGI:1355614|PMID:10813773), (MGI:3527312|PMID:15634774) RGD PMID:10813773 PMID:15634774 MGI:1355614 MGI:3527312 NCBI chr 9:43,807,412...43,858,225
Ensembl chr 9:43,807,677...43,854,396 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 located_in ISO (MGI:5587954|PMID:22183407) RGD PMID:22183407 MGI:5587954 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681 		JBrowse link
G Cngb3 cyclic nucleotide gated channel subunit beta 3 located_in ISO (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr 5:33,097,353...33,507,467
Ensembl chr 5:33,097,654...33,507,467 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 located_in IDA
ISO		 (MGI:3778702|PMID:18367617), (MGI:4461813|PMID:20592197), (MGI:6383261|PMID:31696965)
(PMID:2534964)		 RGD PMID:2534964 PMID:18367617 PMID:20592197 PMID:31696965, PMID:11931744, PMID:10396627 MGI:3778702 MGI:4461813 MGI:6383261, RGD:1599009, RGD:6893629 NCBI chr 8:116,433,302...116,438,038
Ensembl chr 8:116,433,302...116,438,038 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 part_of
located_in		 IDA
IBA
ISO		 PMID:21873635
(PMID:2534964)		 RGD PMID:2534964, PMID:17591908, PMID:21873635, PMID:21873635 RGD:2302146, RGD:13792537, RGD:13792537 NCBI chr 2:210,880,754...210,890,765
Ensembl chr 2:210,880,777...210,889,881 		JBrowse link
G Gnat3 G protein subunit alpha transducin 3 part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:13,827,764...13,878,126
Ensembl chr 4:13,827,756...13,878,126 		JBrowse link
G Gnb1 G protein subunit beta 1 located_in ISO (MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:3778702 NCBI chr 5:172,914,025...172,981,403
Ensembl chr 5:172,934,990...172,979,986 		JBrowse link
G Gnb5 G protein subunit beta 5 located_in ISO (MGI:5507748|PMID:23555598) RGD PMID:23555598 MGI:5507748 NCBI chr 8:82,248,951...82,286,493
Ensembl chr 8:82,257,849...82,285,184 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 IDA RGD PMID:11931744, PMID:10396627 RGD:1599009, RGD:6893629 NCBI chr 4:28,972,339...28,975,419
Ensembl chr 4:28,972,434...28,975,419 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 located_in ISO (MGI:5587954|PMID:22183407) RGD PMID:22183407 MGI:5587954 NCBI chr16:81,153,489...81,165,442
Ensembl chr16:81,153,489...81,165,442 		JBrowse link
G Guca1a guanylate cyclase activator 1A located_in IDA
ISO		 (MGI:5587954|PMID:22183407) RGD PMID:22183407, PMID:9620085 MGI:5587954, RGD:1599354 NCBI chr 9:15,609,804...15,620,030
Ensembl chr 9:15,609,804...15,620,029 		JBrowse link
G Guca1b guanylate cyclase activator 1B IDA RGD PMID:9620085 RGD:1599354 NCBI chr 9:15,621,083...15,629,017
Ensembl chr 9:15,621,083...15,629,017 		JBrowse link
G Guca2b guanylate cyclase activator 2B located_in ISO (MGI:5587954|PMID:22183407) RGD PMID:22183407 MGI:5587954 NCBI chr 5:138,695,591...138,697,641
Ensembl chr 5:138,695,591...138,697,641 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal located_in ISO (PMID:7912093) RGD PMID:7912093 NCBI chr10:55,835,695...55,851,235
Ensembl chr10:55,835,695...55,851,235 		JBrowse link
G Hnf1a HNF1 homeobox A located_in ISO MGI:96770 (MGI:1334099|PMID:10090727) RGD PMID:10090727 MGI:1334099 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342 		JBrowse link
G Ift140 intraflagellar transport 140 located_in ISO (MGI:5604762|PMID:24619649) RGD PMID:24619649 MGI:5604762 NCBI chr10:14,373,668...14,461,509
Ensembl chr10:14,373,679...14,461,160 		JBrowse link
G Ift20 intraflagellar transport 20 located_in ISO (MGI:5317282|PMID:21307337) RGD PMID:21307337 MGI:5317282 NCBI chr10:65,805,808...65,811,353
Ensembl chr10:65,805,860...65,811,351 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 8:87,733,374...87,879,958
Ensembl chr 8:87,733,545...87,879,888 		JBrowse link
G Inha inhibin subunit alpha IDA RGD PMID:7596220 RGD:2290440 NCBI chr 9:82,700,482...82,703,383
Ensembl chr 9:82,700,468...82,703,400 		JBrowse link
G Iqcb1 IQ motif containing B1 located_in ISO (MGI:3763297|PMID:15723066) RGD PMID:15723066 MGI:3763297 NCBI chr11:66,824,059...66,878,585
Ensembl chr11:66,824,065...66,878,551 		JBrowse link
G Lyar Ly1 antibody reactive located_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6107438|PMID:25735755)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:25735755 GO_REF:0000024 GO_REF:0000107 MGI:6107438 NCBI chr14:77,308,211...77,321,931
Ensembl chr14:77,308,204...77,321,977 		JBrowse link
G Mak male germ cell-associated kinase located_in ISS
ISO		 GO_REF:0000024
(MGI:5298333|PMID:21148103)		 UniProt
RGD		 PMID:21148103 GO_REF:0000024 MGI:5298333 NCBI chr17:21,531,651...21,567,742
Ensembl chr17:21,521,505...21,568,440 		JBrowse link
G Map1a microtubule-associated protein 1A located_in ISO (MGI:5587952|PMID:24664738) RGD PMID:24664738 MGI:5587952 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186 		JBrowse link
G Map1b microtubule-associated protein 1B located_in ISO (MGI:5587952|PMID:24664738) RGD PMID:24664738 MGI:5587952 NCBI chr 2:29,675,391...29,768,750
Ensembl chr 2:29,675,391...29,768,750 		JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase IDA RGD PMID:11861639 RGD:1299193 NCBI chr 3:121,235,230...121,340,932
Ensembl chr 3:121,235,119...121,342,444 		JBrowse link
G Myo3b myosin IIIB located_in ISO (MGI:4352610|PMID:19332056) RGD PMID:19332056 MGI:4352610 NCBI chr 3:56,355,433...56,717,740
Ensembl chr 3:56,355,431...56,584,547 		JBrowse link
G Myo5a myosin VA located_in ISO (MGI:3047015|PMID:14978221) RGD PMID:14978221 MGI:3047015 NCBI chr 8:82,038,966...82,156,507
Ensembl chr 8:82,037,977...82,156,617 		JBrowse link
G Myo7a myosin VIIA NOT
NOT|located_in		 IDA
ISO
ISS		 PMID:8842737
(MGI:81971|PMID:8842737)
(PMID:8842737)
GO_REF:0000024		 RGD
UniProt		 PMID:8842737, PMID:8842737, PMID:8842737 GO_REF:0000024 MGI:81971, RGD:8553559, RGD:8553559 NCBI chr 1:163,001,313...163,071,545
Ensembl chr 1:163,001,875...163,071,508 		JBrowse link
G Myrip myosin VIIA and Rab interacting protein located_in IEA
ISO		 GO_REF:0000107
(MGI:2180422|PMID:11964381)		 Ensembl
RGD		 PMID:11964381 GO_REF:0000107 MGI:2180422 NCBI chr 8:128,972,307...129,139,257
Ensembl chr 8:128,972,311...129,139,251 		JBrowse link
G Nupl2 nucleoporin like 2 located_in ISO (MGI:5587954|PMID:22183407) RGD PMID:22183407 MGI:5587954 NCBI chr 4:7,512,326...7,529,106
Ensembl chr 4:7,512,326...7,529,106 		JBrowse link
G Ocrl OCRL, inositol polyphosphate-5-phosphatase located_in ISO (PMID:22543976) RGD PMID:22543976 NCBI chr  X:134,742,226...134,793,411
Ensembl chr  X:134,742,356...134,792,618 		JBrowse link
G Opn1mw opsin 1, medium wave sensitive located_in
part_of		 IDA
ISO
IBA		 (MGI:1354839|PMID:10725384), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:5488667|PMID:23351594), (MGI:5494796|PMID:23386608)
PMID:21873635		 RGD PMID:10725384 PMID:12651948 PMID:19332056 PMID:23351594 PMID:23386608, PMID:20209167, PMID:21873635, PMID:21873635 MGI:1354839 MGI:2654998 MGI:4352610 MGI:5488667 MGI:5494796, RGD:6893562, RGD:13792537, RGD:13792537 NCBI chr  X:156,569,683...156,589,907
Ensembl chr  X:156,569,683...156,589,907 		JBrowse link
G Opn1sw opsin 1, short wave sensitive located_in
part_of		 IDA
ISO
IBA
IEA		 (MGI:1354839|PMID:10725384), (MGI:1355614|PMID:10813773), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:5488667|PMID:23351594), (MGI:5494796|PMID:23386608), (MGI:5587954|PMID:22183407), (MGI:6305433|PMID:26420485)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:10725384 PMID:10813773 PMID:12651948 PMID:19332056 PMID:22183407 PMID:23351594 PMID:23386608 PMID:26420485, PMID:20209167, PMID:21873635, PMID:21873635 GO_REF:0000107 MGI:1354839 MGI:1355614 MGI:2654998 MGI:4352610 MGI:5488667 MGI:5494796 MGI:5587954 MGI:6305433, RGD:6893562, RGD:13792537, RGD:13792537 NCBI chr 4:56,653,840...56,656,980
Ensembl chr 4:56,653,844...56,656,980 		JBrowse link
G Opn3 opsin 3 part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr13:93,716,481...93,746,994
Ensembl chr13:93,716,481...93,746,994 		JBrowse link
G Pcare photoreceptor cilium actin regulator located_in
part_of		 ISO
IBA		 (MGI:5636574|PMID:25616964)
PMID:21873635		 RGD PMID:25616964, PMID:21873635, PMID:21873635 MGI:5636574, RGD:13792537, RGD:13792537 NCBI chr 6:23,337,507...23,346,232
Ensembl chr 6:23,337,571...23,346,173 		JBrowse link
G Pcdh15 protocadherin related 15 located_in ISO (PMID:14570705)
(MGI:3722521|PMID:14570705)		 RGD PMID:14570705 MGI:3722521 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745 		JBrowse link
G Pdc phosducin located_in ISO (MGI:3778702|PMID:18367617) RGD PMID:18367617 MGI:3778702 NCBI chr13:67,545,430...67,558,600
Ensembl chr13:67,545,430...67,558,600 		JBrowse link
G Pde6b phosphodiesterase 6B located_in ISO (MGI:5587954|PMID:22183407) RGD PMID:22183407 MGI:5587954 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883 		JBrowse link
G Pex6 peroxisomal biogenesis factor 6 located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 9:16,568,743...16,580,900
Ensembl chr 9:16,566,688...16,581,078 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr17:85,533,056...85,748,843 JBrowse link
G Prcd photoreceptor disc component located_in ISO (MGI:5819338|PMID:23672200) RGD PMID:23672200 MGI:5819338 NCBI chr10:105,630,686...105,642,427
Ensembl chr10:105,630,810...105,631,208 		JBrowse link
G Prkca protein kinase C, alpha located_in ISO (MGI:1355614|PMID:10813773) RGD PMID:10813773 MGI:1355614 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947 		JBrowse link
G Prom1 prominin 1 located_in ISO (MGI:3838023|PMID:19228982) RGD PMID:19228982 MGI:3838023 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417 		JBrowse link
G Prph peripherin located_in ISO (MGI:5587954|PMID:22183407) RGD PMID:22183407 MGI:5587954 NCBI chr 7:140,742,406...140,746,197
Ensembl chr 7:140,742,418...140,746,197 		JBrowse link
G Prph2 peripherin 2 located_in ISO (MGI:5587954|PMID:22183407), (MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485) RGD PMID:22183407 PMID:26420485 PMID:28053051 MGI:5587954 MGI:5905515 MGI:6305433 NCBI chr 9:16,085,933...16,386,176 JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 located_in IEA
ISO		 GO_REF:0000107
(MGI:2429331|PMID:12355421)		 Ensembl
RGD		 PMID:12355421 GO_REF:0000107 MGI:2429331 NCBI chr 3:15,560,685...15,582,339
Ensembl chr 3:15,560,712...15,582,344 		JBrowse link
G Ptprk protein tyrosine phosphatase, receptor type, K located_in ISO (MGI:3794228|PMID:18308476) RGD PMID:18308476 MGI:3794228 NCBI chr 1:17,445,052...18,058,266
Ensembl chr 1:17,446,417...18,058,055 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family located_in ISO (MGI:2180422|PMID:11964381) RGD PMID:11964381 MGI:2180422 NCBI chr 8:79,722,334...79,776,228
Ensembl chr 8:79,722,334...79,776,221 		JBrowse link
G Rapgef4 Rap guanine nucleotide exchange factor 4 IDA RGD PMID:19883736 RGD:2314691 NCBI chr 3:58,632,338...58,925,127
Ensembl chr 3:58,632,476...58,924,038 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO (MGI:6368063|PMID:29515371) RGD PMID:29515371 MGI:6368063 NCBI chr13:110,739,645...110,749,167
Ensembl chr13:110,743,098...110,748,365 		JBrowse link
G Rgr retinal G protein coupled receptor part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr16:14,286,323...14,300,972
Ensembl chr16:14,286,323...14,300,951 		JBrowse link
G Rgs9 regulator of G-protein signaling 9 located_in ISO (MGI:5507748|PMID:23555598) RGD PMID:23555598 MGI:5507748 NCBI chr10:97,509,971...97,582,188
Ensembl chr10:97,509,971...97,582,188 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein located_in ISO (MGI:5507748|PMID:23555598) RGD PMID:23555598 MGI:5507748 NCBI chr 1:91,855,270...91,855,983
Ensembl chr 1:91,855,270...91,855,983 		JBrowse link
G Rho rhodopsin located_in
part_of		 IDA
ISO
IBA		 (MGI:1354839|PMID:10725384), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:4461813|PMID:20592197), (MGI:4949555|PMID:21444805), (MGI:4950337|PMID:21212183), (MGI:5462139|PMID:22869374), (MGI:5467890|PMID:23178122), (MGI:5488667|PMID:23351594), (MGI:5525015|PMID:23943788), (MGI:5587954|PMID:22183407), (MGI:5607451|PMID:25224828), (MGI:6305433|PMID:26420485)
PMID:21873635
(PMID:11767049), (PMID:23704327)		 RGD PMID:10725384 PMID:11767049 PMID:12651948 PMID:19332056 PMID:20592197 PMID:21212183 PMID:21444805 PMID:22183407 PMID:22869374 PMID:23178122 PMID:23351594 PMID:23704327 PMID:23943788 PMID:25224828 PMID:26420485, PMID:8814134, PMID:21873635, PMID:21873635 MGI:1354839 MGI:2654998 MGI:4352610 MGI:4461813 MGI:4949555 MGI:4950337 MGI:5462139 MGI:5467890 MGI:5488667 MGI:5525015 MGI:5587954 MGI:5607451 MGI:6305433, RGD:6893595, RGD:13792537, RGD:13792537 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (MGI:4461813|PMID:20592197), (MGI:5587954|PMID:22183407), (MGI:6305433|PMID:26420485) RGD PMID:20592197 PMID:22183407 PMID:26420485 MGI:4461813 MGI:5587954 MGI:6305433 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740 		JBrowse link
G Rp1 RP1, axonemal microtubule associated located_in ISO (MGI:2676521|PMID:14507858), (MGI:3629826|PMID:15269252) RGD PMID:14507858 PMID:15269252 MGI:2676521 MGI:3629826 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508 		JBrowse link
G Rp1l1 RP1 like 1 located_in ISO (MGI:4353917|PMID:19657028) RGD PMID:19657028 MGI:4353917 NCBI chr15:47,344,380...47,384,461
Ensembl chr15:47,373,120...47,383,508 		JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator located_in ISO (PMID:12140192) RGD PMID:12140192 NCBI chr  X:14,271,012...14,331,745
Ensembl chr  X:14,271,017...14,331,486 		JBrowse link
G Rrh retinal pigment epithelium derived rhodopsin homolog part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 2:235,237,422...235,250,474
Ensembl chr 2:235,237,414...235,249,575 		JBrowse link
G Sag S-antigen visual arrestin located_in
part_of		 IDA
ISO
IEA
IBA		 (MGI:5462139|PMID:22869374)
GO_REF:0000107
PMID:21873635
(PMID:3720866)		 RGD
Ensembl		 PMID:3720866 PMID:22869374, PMID:10396627, PMID:21873635, PMID:21873635 GO_REF:0000107 MGI:5462139, RGD:6893629, RGD:13792537, RGD:13792537 NCBI chr 9:94,926,901...94,972,162
Ensembl chr 9:94,928,489...94,972,027 		JBrowse link
G Shank2 SH3 and multiple ankyrin repeat domains 2 located_in
part_of		 ISS
ISO		 GO_REF:0000024
(MGI:5306573|PMID:19299912)		 BHF-UCL
RGD		 PMID:19299912 GO_REF:0000024 MGI:5306573 NCBI chr 1:217,149,156...217,593,950
Ensembl chr 1:217,151,166...217,592,763 		JBrowse link
G Tulp1 TUB like protein 1 located_in ISO (MGI:4397555|PMID:19218615) RGD PMID:19218615 MGI:4397555 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575 		JBrowse link
G Ush1c USH1 protein network component harmonin located_in IDA
ISO		 (MGI:2679149|PMID:14578428), (MGI:3774983|PMID:17906286) RGD PMID:14578428 PMID:17906286, PMID:14578428 MGI:2679149 MGI:3774983, RGD:1303964 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459 		JBrowse link
G Vcan versican located_in IEA GO_REF:0000044 UniProt GO_REF:0000044 NCBI chr 2:18,490,102...18,587,340
Ensembl chr 2:18,490,102...18,565,842 		JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdhr1 cadherin-related family member 1 located_in ISO (MGI:3814988|PMID:18654668) RGD PMID:18654668 MGI:3814988 NCBI chr16:14,328,161...14,348,049
Ensembl chr16:14,328,160...14,348,046 		JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 located_in IEA
ISO		 GO_REF:0000107
(MGI:3814988|PMID:18654668)		 Ensembl
RGD		 PMID:18654668 GO_REF:0000107 MGI:3814988 NCBI chr14:38,155,771...38,171,107
Ensembl chr14:38,155,759...38,171,010 		JBrowse link
G Gnb1 G protein subunit beta 1 IDA RGD PMID:11931744 RGD:1599009 NCBI chr 5:172,914,025...172,981,403
Ensembl chr 5:172,934,990...172,979,986 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal located_in IDA
ISO
IEA		 PMID:9153227
(MGI:5049799|PMID:21598940)
GO_REF:0000107		 RGD
Ensembl		 PMID:21598940, PMID:9153227, PMID:9153227 GO_REF:0000107 MGI:5049799, RGD:1599625, RGD:1599625 NCBI chr10:55,835,695...55,851,235
Ensembl chr10:55,835,695...55,851,235 		JBrowse link
G Pde6a phosphodiesterase 6A part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr18:56,544,652...56,617,480
Ensembl chr18:56,544,652...56,617,480 		JBrowse link
G Pde6b phosphodiesterase 6B part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr14:2,328,690...2,371,913
Ensembl chr14:2,328,750...2,371,883 		JBrowse link
G Pde6g phosphodiesterase 6G part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr10:109,620,499...109,625,214
Ensembl chr10:109,620,980...109,622,745 		JBrowse link
G Pde6h phosphodiesterase 6H part_of IBA PMID:21873635 GO_Central PMID:21873635, PMID:21873635 RGD:13792537, RGD:13792537 NCBI chr 4:170,947,723...170,963,046
Ensembl chr 4:170,958,196...170,963,046 		JBrowse link
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 IDA RGD PMID:20089132 RGD:5131540 NCBI chr19:41,731,845...41,798,451
Ensembl chr19:41,731,646...41,798,383 		JBrowse link
G Prcd photoreceptor disc component located_in ISO
IEA		 (PMID:27613864)
(MGI:5812604|PMID:27613864), (MGI:6271388|PMID:27509380)
GO_REF:0000107		 RGD
Ensembl		 PMID:27509380 PMID:27613864 GO_REF:0000107 MGI:5812604 MGI:6271388 NCBI chr10:105,630,686...105,642,427
Ensembl chr10:105,630,810...105,631,208 		JBrowse link
G Prom1 prominin 1 located_in ISO (PMID:18654668) RGD PMID:18654668 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417 		JBrowse link
G Prph peripherin located_in ISO (MGI:1343017|PMID:10414956) RGD PMID:10414956 MGI:1343017 NCBI chr 7:140,742,406...140,746,197
Ensembl chr 7:140,742,418...140,746,197 		JBrowse link
G Rdh11 retinol dehydrogenase 11 NOT
NOT|located_in		 ISO (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:102,356,498...102,372,618
Ensembl chr 6:102,356,492...102,372,611 		JBrowse link
G Rho rhodopsin located_in IDA
IEA
ISO
ISS		 GO_REF:0000107
(PMID:19934218)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19934218, PMID:2209754 GO_REF:0000024 GO_REF:0000107, RGD:6893561 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298 		JBrowse link
G Rom1 retinal outer segment membrane protein 1 located_in ISO (MGI:3814988|PMID:18654668) RGD PMID:18654668 MGI:3814988 NCBI chr 1:225,126,732...225,128,740
Ensembl chr 1:225,126,734...225,128,740 		JBrowse link
photoreceptor proximal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep290 centrosomal protein 290 part_of ISO (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327 		JBrowse link
rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 located_in ISO (PMID:26373354) RGD PMID:26373354 NCBI chr13:90,605,792...90,642,032
Ensembl chr13:90,605,794...90,641,772 		JBrowse link
G Cep290 centrosomal protein 290 part_of ISO MGI:2144877 (MGI:6194004|PMID:29899041) RGD PMID:29899041 MGI:6194004 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327 		JBrowse link
G Gucy2f guanylate cyclase 2F located_in ISS
ISO		 GO_REF:0000024
(MGI:4867355|PMID:21078983)		 UniProt
RGD		 PMID:21078983 GO_REF:0000024 MGI:4867355 NCBI chr  X:113,372,240...113,474,210
Ensembl chr  X:113,372,240...113,474,164 		JBrowse link
G Rd3 RD3 regulator of GUCY2D located_in ISO (MGI:4867355|PMID:21078983) RGD PMID:21078983 MGI:4867355 NCBI chr13:110,739,645...110,749,167
Ensembl chr13:110,743,098...110,748,365 		JBrowse link
G Spata7 spermatogenesis associated 7 part_of
located_in		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2384917|MGI:5660490 (MGI:6194004|PMID:29899041)
PMID:21873635		 Ensembl
RGD		 PMID:29899041, PMID:21873635, PMID:21873635 GO_REF:0000107 MGI:6194004, RGD:13792537, RGD:13792537 NCBI chr 6:122,603,248...122,648,718
Ensembl chr 6:122,603,269...122,648,699 		JBrowse link
G Tmem237 transmembrane protein 237 located_in ISO (MGI:4830641|PMID:20375344) RGD PMID:20375344 MGI:4830641 NCBI chr 9:65,882,063...65,917,424
Ensembl chr 9:65,882,054...65,917,132 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20686
    cellular anatomical entity 20388
      organelle 13412
        cilium 689
          non-motile cilium 172
            9+0 non-motile cilium 132
              photoreceptor cell cilium + 119
Path 2
Term Annotations click to browse term
  cellular_component 20686
    cellular anatomical entity 20388
      cell projection 2560
        plasma membrane bounded cell projection 2486
          cilium 689
            non-motile cilium 172
              9+0 non-motile cilium 132
                photoreceptor cell cilium + 119
paths to the root