ONTOLOGY REPORT - ANNOTATIONS
Term: 9+0 non-motile cilium
Accession: GO:0097731
browse the term
Definition: A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets but no central microtubules (and is therefore called a 9+0 axoneme).
Comment: This type of cilia may be present in solitary (authentic primary cilia in many cell types) or in multiple copies (e.g. in Grueneberg ganglion neurons).
Synonyms: exact_synonym: 9+0 immotile cilium
narrow_synonym: primary cilium
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C1orf115
chromosome 1 open reading frame 115
located_in
IDA
(PMID:29257953)
GO_Central
PMID:29257953
NCBI chr 1:220,690,363...220,699,153
Ensembl chr 1:220,690,363...220,699,153
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C4orf47
chromosome 4 open reading frame 47
located_in
IDA
(PMID:29257953)
GO_Central
PMID:29257953
NCBI chr 4:185,405,227...185,449,828
Ensembl chr 4:185,426,249...185,449,826
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DYNLL2
dynein light chain LC8-type 2
located_in
IDA
(PMID:29257953)
GO_Central
PMID:29257953
NCBI chr17:58,083,419...58,095,542
Ensembl chr17:58,083,419...58,095,542
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IFT80
intraflagellar transport 80
located_in
IEA ISO
(MGI:5807019|PMID:26996322)
Ensembl MGI
PMID:26996322
GO_REF:0000107 MGI:5807019
NCBI chr 3:160,256,986...160,399,225
Ensembl chr 3:160,256,986...160,399,880
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IFTAP
intraflagellar transport associated protein
part_of
IBA ISO
(PMID:21873635) (MGI:5807035|PMID:26703212)
GO_Central MGI
PMID:21873635 PMID:26703212
MGI:5807035
NCBI chr11:36,594,246...36,659,272
Ensembl chr11:36,594,493...36,659,290 Ensembl chr11:36,594,493...36,659,290
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PHYH
phytanoyl-CoA 2-hydroxylase
located_in
IDA
(PMID:29257953)
GO_Central
PMID:29257953
NCBI chr10:13,277,799...13,300,064
Ensembl chr10:13,277,796...13,302,412
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PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin
located_in
IEA ISO
(MGI:5604763|PMID:24586199)
Ensembl MGI
PMID:24586199
GO_REF:0000107 MGI:5604763
NCBI chr 6:51,614,685...52,087,625
Ensembl chr 6:51,615,299...52,087,613
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SMO
smoothened, frizzled class receptor
located_in
IEA ISO
(MGI:5807019|PMID:26996322)
Ensembl MGI
PMID:26996322
GO_REF:0000107 MGI:5807019
NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
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TTLL4
tubulin tyrosine ligase like 4
located_in
IEA ISO
(MGI:3771321|PMID:17499049)
Ensembl MGI
PMID:17499049
GO_REF:0000107 MGI:3771321
NCBI chr 2:218,710,835...218,757,484
Ensembl chr 2:218,710,835...218,755,416
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TTLL5
tubulin tyrosine ligase like 5
ISO
(MGI:3771321|PMID:17499049)
MGI
PMID:17499049
MGI:3771321
NCBI chr14:75,661,246...75,955,079
Ensembl chr14:75,633,625...75,955,079
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TTLL6
tubulin tyrosine ligase like 6
located_in
IEA ISO
(MGI:3771321|PMID:17499049)
Ensembl MGI
PMID:17499049
GO_REF:0000107 MGI:3771321
NCBI chr17:48,762,234...48,817,247
Ensembl chr17:48,762,235...48,817,214
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TTLL7
tubulin tyrosine ligase like 7
ISO
(MGI:3771321|PMID:17499049)
MGI
PMID:17499049
MGI:3771321
NCBI chr 1:83,865,021...83,999,141
Ensembl chr 1:83,865,024...83,999,150
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TULP3
TUB like protein 3
part_of
IDA
(PMID:20889716)
MGI
PMID:20889716
NCBI chr12:2,890,891...2,941,138
Ensembl chr12:2,877,223...2,941,138
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GUCA1A
guanylate cyclase activator 1A
located_in
IDA
(PMID:9620085)
UniProt
PMID:9620085
NCBI chr 6:42,173,364...42,180,056
Ensembl chr 6:42,155,406...42,180,049 Ensembl chr 6:42,155,406...42,180,049 Ensembl chr 6:42,155,406...42,180,049
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GUCA1ANB
GUCA1A neighbor
ISO
(MGI:6437034|PMID:9620085)
UniProt
PMID:9620085
MGI:6437034
NCBI chr 6:42,155,406...42,163,418
Ensembl chr 6:42,155,406...42,163,439 Ensembl chr 6:42,155,406...42,163,439 Ensembl chr 6:42,155,406...42,163,439 Ensembl chr 6:42,155,406...42,163,439
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GUCA1B
guanylate cyclase activator 1B
located_in
IDA
(PMID:9620085)
UniProt
PMID:9620085
NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
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LOC118142757
GUCA1ANB-GUCA1A readthrough
located_in
IDA
(PMID:9620085)
UniProt
PMID:9620085
NCBI chr 6:42,155,406...42,180,056
Ensembl chr 6:42,155,406...42,181,338
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RD3
RD3 regulator of GUCY2D
located_in
IEA ISO
(MGI:4867355|PMID:21078983)
Ensembl UniProt
PMID:21078983
GO_REF:0000107 MGI:4867355
NCBI chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162 Ensembl chr 1:211,476,522...211,492,162
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TMEM237
transmembrane protein 237
located_in
IEA ISO
(MGI:4830641|PMID:20375344)
Ensembl MGI
PMID:20375344
GO_REF:0000107 MGI:4830641
NCBI chr 2:201,620,186...201,643,503
Ensembl chr 2:201,620,184...201,643,570
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ATP1A4
ATPase Na+/K+ transporting subunit alpha 4
located_in
IDA
(PMID:26373354)
ARUK-UCL
PMID:26373354
NCBI chr 1:160,151,603...160,186,980
Ensembl chr 1:160,151,586...160,186,980 Ensembl chr 1:160,151,586...160,186,980
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CFAP410
cilia and flagella associated protein 410
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr21:44,328,944...44,339,417
Ensembl chr21:44,328,944...44,339,402
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FAM161A
FAM161 centrosomal protein A
ISO
(MGI:5438885|PMID:22791751)
UniProt
PMID:22791751
MGI:5438885
NCBI chr 2:61,800,240...61,854,126
Ensembl chr 2:61,824,848...61,854,143
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IFT52
intraflagellar transport 52
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
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PEX6
peroxisomal biogenesis factor 6
located_in
IDA ISO
(PMID:26593283) (MGI:5816430|PMID:26593283)
UniProt UniProt
PMID:26593283
MGI:5816430
NCBI chr 6:42,963,865...42,980,224
Ensembl chr 6:42,963,865...42,979,181
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RP1
RP1 axonemal microtubule associated
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr 8:54,509,448...54,871,720
Ensembl chr 8:54,509,422...54,871,720
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SDCCAG8
SHH signaling and ciliogenesis regulator SDCCAG8
located_in
IEA ISO
(MGI:6194004|PMID:29899041)
Ensembl MGI
PMID:29899041
GO_REF:0000107 MGI:6194004
NCBI chr 1:243,255,418...243,503,683
Ensembl chr 1:243,256,034...243,500,091
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ADGRV1
adhesion G protein-coupled receptor V1
ISO
(MGI:3774983|PMID:17906286)
MGI
PMID:17906286
MGI:3774983
NCBI chr 5:90,558,796...91,164,437
Ensembl chr 5:90,529,344...91,164,437
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ARL3
ADP ribosylation factor like GTPase 3
located_in
IDA
(PMID:12417528)
UniProt
PMID:12417528
NCBI chr10:102,673,731...102,714,397
Ensembl chr10:102,673,731...102,714,397
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BBS4
Bardet-Biedl syndrome 4
ISO
(MGI:5525015|PMID:23943788)
MGI
PMID:23943788
MGI:5525015
NCBI chr15:72,686,204...72,738,476
Ensembl chr15:72,686,179...72,738,475
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CEP290
centrosomal protein 290
located_in
ISS ISO
(PMID:16682973) (MGI:3624140|PMID:16632484), (MGI:3653539|PMID:16682973), (MGI:5525015|PMID:23943788)
UniProt UniProt
PMID:16632484 PMID:16682973 PMID:23943788
MGI:3624140 MGI:3653539 MGI:5525015
NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099 Ensembl chr12:88,049,016...88,142,099
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CETN1
centrin 1
located_in
ISS ISO
(MGI:3525432|PMID:15347651), (MGI:6393223|PMID:30120214)
UniProt MGI
PMID:15347651 PMID:30120214
GO_REF:0000024 MGI:3525432 MGI:6393223
NCBI chr18:580,380...582,114
Ensembl chr18:580,380...582,114
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CETN2
centrin 2
located_in
IEA ISO
(MGI:3525432|PMID:15347651)
Ensembl MGI
PMID:15347651
GO_REF:0000107 MGI:3525432
NCBI chr X:152,826,994...152,830,757
Ensembl chr X:152,826,994...152,830,757 Ensembl chr X:152,826,994...152,830,757
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CETN3
centrin 3
located_in
IEA ISO
(MGI:3525432|PMID:15347651), (MGI:5303017|PMID:22031837), (MGI:5588761|PMID:24833722)
Ensembl MGI
PMID:15347651 PMID:22031837 PMID:24833722
GO_REF:0000107 MGI:3525432 MGI:5303017 MGI:5588761
NCBI chr 5:90,392,257...90,409,756
Ensembl chr 5:90,392,257...90,409,766 Ensembl chr 5:90,392,257...90,409,766
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CFAP410
cilia and flagella associated protein 410
located_in
ISS ISO
(MGI:5770162|PMID:26974433)
UniProt UniProt
PMID:26974433
GO_REF:0000024 MGI:5770162
NCBI chr21:44,328,944...44,339,417
Ensembl chr21:44,328,944...44,339,402
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FAM161A
FAM161 centrosomal protein A
located_in part_of
IDA ISO IBA
(PMID:22940612) (MGI:5438885|PMID:22791751), (MGI:5442623|PMID:22940612), (MGI:5588761|PMID:24833722) (PMID:21873635)
UniProt UniProt GO_Central
PMID:21873635 PMID:22791751 PMID:22940612 PMID:24833722
MGI:5438885 MGI:5442623 MGI:5588761 RGD:8553427
NCBI chr 2:61,800,240...61,854,126
Ensembl chr 2:61,824,848...61,854,143
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GNAT1
G protein subunit alpha transducin 1
located_in
IEA ISO
(MGI:3757777|PMID:17881533)
Ensembl MGI
PMID:17881533
GO_REF:0000107 MGI:3757777
NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
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IFT122
intraflagellar transport 122
located_in
ISS ISO
(MGI:3839506|PMID:19208653)
UniProt UniProt
PMID:19208653
GO_REF:0000024 MGI:3839506
NCBI chr 3:129,440,075...129,520,507
Ensembl chr 3:129,440,036...129,520,507
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IFT140
intraflagellar transport 140
located_in
IEA ISO
(MGI:4460838|PMID:20368623), (MGI:5604762|PMID:24619649)
Ensembl MGI
PMID:20368623 PMID:24619649
GO_REF:0000107 MGI:4460838 MGI:5604762
NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072
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IFT20
intraflagellar transport 20
located_in
IEA ISO
(MGI:5317282|PMID:21307337)
Ensembl MGI
PMID:21307337
GO_REF:0000107 MGI:5317282
NCBI chr17:28,328,326...28,335,472
Ensembl chr17:28,328,325...28,335,489
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IFT52
intraflagellar transport 52
located_in
IEA ISO
(MGI:4460838|PMID:20368623)
Ensembl MGI
PMID:20368623
GO_REF:0000107 MGI:4460838
NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
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IFT57
intraflagellar transport 57
located_in
IEA ISO
(MGI:4460838|PMID:20368623)
Ensembl MGI
PMID:20368623
GO_REF:0000107 MGI:4460838
NCBI chr 3:108,160,812...108,222,424
Ensembl chr 3:108,160,812...108,222,435
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IFT88
intraflagellar transport 88
ISO
(MGI:3839506|PMID:19208653), (MGI:4460838|PMID:20368623)
MGI
PMID:19208653 PMID:20368623
MGI:3839506 MGI:4460838
NCBI chr13:20,566,446...20,691,444
Ensembl chr13:20,567,069...20,691,437 Ensembl chr13:20,567,069...20,691,437
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IQCB1
IQ motif containing B1
located_in
IDA ISO
(PMID:15723066) (MGI:3763297|PMID:15723066)
HGNC-UCL HGNC-UCL
PMID:15723066
MGI:3763297
NCBI chr 3:121,769,761...121,835,060
Ensembl chr 3:121,769,761...121,835,079
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KIAA1549
KIAA1549
located_in
ISS ISO
(MGI:6393223|PMID:30120214)
UniProt UniProt
PMID:30120214
GO_REF:0000024 MGI:6393223
NCBI chr 7:138,831,377...138,981,626
Ensembl chr 7:138,831,381...138,981,318 Ensembl chr 7:138,831,381...138,981,318
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KIF17
kinesin family member 17
located_in
IEA ISO
(MGI:4353477|PMID:19384852)
Ensembl MGI
PMID:19384852
GO_REF:0000107 MGI:4353477
NCBI chr 1:20,664,014...20,718,007
Ensembl chr 1:20,664,014...20,718,017
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KIF3A
kinesin family member 3A
ISO
(MGI:3839506|PMID:19208653)
UniProt
PMID:19208653
MGI:3839506
NCBI chr 5:132,688,808...132,737,563
Ensembl chr 5:132,692,628...132,737,638
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KIFAP3
kinesin associated protein 3
located_in
IEA ISO
(MGI:4353477|PMID:19384852)
Ensembl MGI
PMID:19384852
GO_REF:0000107 MGI:4353477
NCBI chr 1:169,921,326...170,085,203
Ensembl chr 1:169,921,326...170,085,208
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LCA5
lebercilin LCA5
located_in
IDA ISO
(PMID:21606596) (MGI:5050784|PMID:21606596) PMID:17546029
UniProt UniProt
PMID:17546029 PMID:21606596
MGI:5050784 RGD:14397561
NCBI chr 6:79,484,991...79,537,430
Ensembl chr 6:79,484,991...79,537,458
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MAK
male germ cell associated kinase
located_in
IEA ISO
(MGI:5298333|PMID:21148103)
Ensembl MGI
PMID:21148103
GO_REF:0000107 MGI:5298333
NCBI chr 6:10,762,723...10,838,954
Ensembl chr 6:10,762,723...10,838,553 Ensembl chr 6:10,762,723...10,838,553
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MYO7A
myosin VIIA
located_in
IEA ISO
(MGI:1343017|PMID:10414956)
Ensembl MGI
PMID:10414956
GO_REF:0000107 MGI:1343017
NCBI chr11:77,128,192...77,215,241
Ensembl chr11:77,128,246...77,215,241
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NPHP1
nephrocystin 1
located_in
ISS ISO
(MGI:4821072|PMID:16885411)
UniProt UniProt
PMID:16885411
GO_REF:0000024 MGI:4821072
NCBI chr 2:110,123,348...110,205,013
Ensembl chr 2:110,122,311...110,205,066
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NPHP4
nephrocystin 4
ISO
(MGI:4867588|PMID:21078623)
MGI
PMID:21078623
MGI:4867588
NCBI chr 1:5,862,810...5,992,425
Ensembl chr 1:5,862,811...5,992,473
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PCDHB15
protocadherin beta 15
located_in
IEA ISO
(MGI:3775581|PMID:18279309)
Ensembl MGI
PMID:18279309
GO_REF:0000107 MGI:3775581
NCBI chr 5:141,245,395...141,249,365
Ensembl chr 5:141,245,395...141,249,365
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PCDHB8
protocadherin beta 8
ISO
(MGI:3775581|PMID:18279309)
MGI
PMID:18279309
MGI:3775581
NCBI chr 5:141,177,790...141,180,539
Ensembl chr 5:141,177,790...141,180,539
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PDZD7
PDZ domain containing 7
colocalizes_with
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr10:101,007,679...101,031,145
Ensembl chr10:101,007,679...101,032,295
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RP1
RP1 axonemal microtubule associated
part_of
IDA ISO
(PMID:11767049) (MGI:2156902|PMID:11773008), (MGI:2676521|PMID:14507858)
MGI UniProt
PMID:11767049 PMID:11773008 PMID:14507858
MGI:2156902 MGI:2676521
NCBI chr 8:54,509,448...54,871,720
Ensembl chr 8:54,509,422...54,871,720
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RP1L1
RP1 like 1
located_in
ISS ISO
(MGI:4353917|PMID:19657028)
UniProt UniProt
PMID:19657028
GO_REF:0000024 MGI:4353917
NCBI chr 8:10,606,349...10,655,143
Ensembl chr 8:10,606,349...10,712,187
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RPGR
retinitis pigmentosa GTPase regulator
ISO
(MGI:1354839|PMID:10725384)
MGI
PMID:10725384
MGI:1354839
NCBI chr X:38,269,163...38,327,509
Ensembl chr X:38,269,170...38,327,544 Ensembl chr X:38,269,170...38,327,544
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RPGRIP1
RPGR interacting protein 1
located_in part_of
ISS ISO IEA IBA
(MGI:5608598|PMID:25398945) (PMID:21873635)
UniProt UniProt InterPro GO_Central
PMID:21873635 PMID:25398945
GO_REF:0000002 GO_REF:0000024 MGI:5608598
NCBI chr14:21,280,083...21,351,316
Ensembl chr14:21,287,939...21,351,301 Ensembl chr14:21,287,939...21,351,301
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RPGRIP1L
RPGRIP1 like
part_of
IBA ISO
(PMID:21873635)
GO_Central RGD
PMID:17558407 PMID:21873635
RGD:11537356
NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938
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SEPTIN2
septin 2
located_in
IDA
(PMID:23572511)
GO_Central
PMID:23572511
NCBI chr 2:241,315,270...241,354,027
Ensembl chr 2:241,315,100...241,354,027
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SPATA7
spermatogenesis associated 7
located_in
ISS ISO
(MGI:5608598|PMID:25398945)
UniProt UniProt
PMID:25398945
GO_REF:0000024 MGI:5608598
NCBI chr14:88,385,638...88,470,350
Ensembl chr14:88,384,924...88,470,350
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SPTBN5
spectrin beta, non-erythrocytic 5
part_of
IDA
(PMID:23704327)
MGI
PMID:23704327
NCBI chr15:41,848,146...41,894,053
Ensembl chr15:41,848,146...41,894,053
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TBCC
tubulin folding cofactor C
located_in
IDA
(PMID:12417528)
UniProt
PMID:12417528
NCBI chr 6:42,744,498...42,746,103
Ensembl chr 6:42,744,498...42,746,103
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TMEM237
transmembrane protein 237
located_in
IEA ISO
(MGI:4830641|PMID:20375344)
Ensembl MGI
PMID:20375344
GO_REF:0000107 MGI:4830641
NCBI chr 2:201,620,186...201,643,503
Ensembl chr 2:201,620,184...201,643,570
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TOPORS
TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase
part_of located_in
IBA ISO IDA
(PMID:21873635) (MGI:4939557|PMID:21159800) (PMID:21159800)
GO_Central BHF-UCL BHF-UCL
PMID:21159800 PMID:21873635
MGI:4939557
NCBI chr 9:32,540,544...32,552,586
Ensembl chr 9:32,540,544...32,552,586
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TSGA10IP
testis specific 10 interacting protein
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr11:65,945,445...65,960,437
Ensembl chr11:65,945,445...65,959,963
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TTC8
tetratricopeptide repeat domain 8
located_in
IEA ISO
(MGI:2677624|PMID:14520415)
Ensembl BHF-UCL
PMID:14520415
GO_REF:0000107 MGI:2677624
NCBI chr14:88,824,153...88,881,079
Ensembl chr14:88,824,153...88,881,078
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USH1C
USH1 protein network component harmonin
colocalizes_with
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr11:17,493,895...17,544,416
Ensembl chr11:17,493,895...17,544,416
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USH1G
USH1 protein network component sans
located_in
IEA ISO
(MGI:3774983|PMID:17906286)
Ensembl MGI
PMID:17906286
GO_REF:0000107 MGI:3774983
NCBI chr17:74,916,083...74,923,255
Ensembl chr17:74,916,083...74,923,256
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USH2A
usherin
colocalizes_with
ISS ISO
(MGI:3774983|PMID:17906286), (MGI:4950337|PMID:21212183)
UniProt MGI
PMID:17906286 PMID:21212183
GO_REF:0000024 MGI:3774983 MGI:4950337
NCBI chr 1:215,622,891...216,423,448
Ensembl chr 1:215,622,891...216,423,448
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WDR19
WD repeat domain 19
located_in
ISS ISO
(MGI:3839506|PMID:19208653)
UniProt UniProt
PMID:19208653
GO_REF:0000024 MGI:3839506
NCBI chr 4:39,182,473...39,285,810
Ensembl chr 4:39,182,504...39,285,810
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WHRN
whirlin
colocalizes_with
ISS ISO IBA
(MGI:3774983|PMID:17906286), (MGI:4950337|PMID:21212183) (PMID:21873635)
UniProt MGI GO_Central
PMID:17906286 PMID:21212183 PMID:21873635
GO_REF:0000024 MGI:3774983 MGI:4950337
NCBI chr 9:114,402,078...114,505,500
Ensembl chr 9:114,402,080...114,505,473
G
ABCA4
ATP binding cassette subfamily A member 4
located_in
TAS
Reactome
Reactome:R-HSA-1467466 Reactome:R-HSA-2466802
NCBI chr 1:93,992,834...94,121,148
Ensembl chr 1:93,992,834...94,121,148
G
GNAT1
G protein subunit alpha transducin 1
located_in
TAS
Reactome
Reactome:R-HSA-2485182 Reactome:R-HSA-2534087 Reactome:R-HSA-2584246 Reactome:R-HSA-74059
NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
G
GNB1
G protein subunit beta 1
located_in
TAS
Reactome
Reactome:R-HSA-2485182
NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,891,117
G
GNGT1
G protein subunit gamma transducin 1
located_in
TAS
Reactome
Reactome:R-HSA-2485182 Reactome:R-HSA-2530501
NCBI chr 7:93,906,567...93,911,265
Ensembl chr 7:93,591,573...93,911,265
G
GRK1
G protein-coupled receptor kinase 1
located_in
TAS
Reactome
Reactome:R-HSA-2581474
NCBI chr13:113,645,771...113,737,736
Ensembl chr13:113,667,219...113,737,736
G
GRK4
G protein-coupled receptor kinase 4
located_in
TAS
Reactome
Reactome:R-HSA-2581474
NCBI chr 4:2,963,504...3,040,760
Ensembl chr 4:2,963,571...3,040,760
G
GRK7
G protein-coupled receptor kinase 7
located_in
TAS
Reactome
Reactome:R-HSA-2581474
NCBI chr 3:141,763,408...141,819,352
Ensembl chr 3:141,778,148...141,818,490
G
GUCA1A
guanylate cyclase activator 1A
located_in
TAS
Reactome
Reactome:R-HSA-2586748
NCBI chr 6:42,173,364...42,180,056
Ensembl chr 6:42,155,406...42,180,049 Ensembl chr 6:42,155,406...42,180,049 Ensembl chr 6:42,155,406...42,180,049
G
GUCA1B
guanylate cyclase activator 1B
located_in
TAS
Reactome
Reactome:R-HSA-2586748
NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
G
GUCA1C
guanylate cyclase activator 1C
located_in
TAS
Reactome
Reactome:R-HSA-2586748
NCBI chr 3:108,907,644...108,955,195
Ensembl chr 3:108,907,792...108,953,879
G
GUCY2D
guanylate cyclase 2D, retinal
located_in
TAS
Reactome
Reactome:R-HSA-74885
NCBI chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342 Ensembl chr17:8,002,615...8,020,342
G
GUCY2F
guanylate cyclase 2F, retinal
located_in
TAS
Reactome
Reactome:R-HSA-74885
NCBI chr X:109,372,061...109,482,086
Ensembl chr X:109,372,906...109,482,086
G
LOC118142757
GUCA1ANB-GUCA1A readthrough
located_in
TAS
Reactome
Reactome:R-HSA-2586748
NCBI chr 6:42,155,406...42,180,056
Ensembl chr 6:42,155,406...42,181,338
G
OPN1LW
opsin 1, long wave sensitive
located_in
TAS
Reactome
Reactome:R-HSA-2465917 Reactome:R-HSA-2465924 Reactome:R-HSA-2466085 Reactome:R-HSA-2466822 Reactome:R-HSA-2471660 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640
NCBI chr X:154,144,243...154,159,032
Ensembl chr X:154,144,243...154,159,032
G
OPN1MW
opsin 1, medium wave sensitive
located_in
TAS
Reactome
Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466706 Reactome:R-HSA-2471641 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656893
NCBI chr X:154,182,596...154,196,861
Ensembl chr X:154,182,596...154,196,861
G
OPN1MW2
opsin 1, medium wave sensitive 2
located_in
TAS
Reactome
Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466706 Reactome:R-HSA-2471641 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656893
NCBI chr X:154,219,756...154,233,286
Ensembl chr X:154,219,756...154,233,286
G
OPN1MW3
opsin 1, medium wave sensitive 3
located_in
TAS
Reactome
Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466706 Reactome:R-HSA-2471641 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656893
NCBI chr X:154,257,560...154,271,090
Ensembl chr X:154,257,538...154,271,805
G
OPN1SW
opsin 1, short wave sensitive
located_in
TAS
Reactome
Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466834 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656891
NCBI chr 7:128,772,485...128,775,794
Ensembl chr 7:128,772,491...128,775,790 Ensembl chr 7:128,772,491...128,775,790
G
OPN4
opsin 4
located_in
TAS
Reactome
Reactome:R-HSA-379048 Reactome:R-HSA-419861 Reactome:R-HSA-749448 Reactome:R-HSA-749452
NCBI chr10:86,653,495...86,666,460
Ensembl chr10:86,654,547...86,666,848
G
PCDHB8
protocadherin beta 8
ISO
(MGI:3775581|PMID:18279309)
MGI
PMID:18279309
MGI:3775581
NCBI chr 5:141,177,790...141,180,539
Ensembl chr 5:141,177,790...141,180,539
G
PDE6A
phosphodiesterase 6A
located_in
TAS
Reactome
Reactome:R-HSA-2584246 Reactome:R-HSA-74059
NCBI chr 5:149,857,953...149,944,793
Ensembl chr 5:149,857,953...149,944,793
G
PDE6B
phosphodiesterase 6B
located_in
TAS
Reactome
Reactome:R-HSA-2584246 Reactome:R-HSA-74059
NCBI chr 4:587,325...670,892
Ensembl chr 4:625,584...670,782 Ensembl chr 4:625,584...670,782
G
PDE6G
phosphodiesterase 6G
located_in
TAS
Reactome
Reactome:R-HSA-2584246 Reactome:R-HSA-74059
NCBI chr17:81,650,459...81,663,127
Ensembl chr17:81,650,459...81,663,112
G
RHO
rhodopsin
located_in
IDA TAS
(PMID:25664179)
UniProt Reactome
PMID:25664179
Reactome:R-HSA-2454118 Reactome:R-HSA-2581474 Reactome:R-HSA-2632521 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-74101 Reactome:R-HSA-74948 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640
NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344
G
SPTBN5
spectrin beta, non-erythrocytic 5
part_of
IDA
(PMID:23704327)
MGI
PMID:23704327
NCBI chr15:41,848,146...41,894,053
Ensembl chr15:41,848,146...41,894,053
G
AHI1
Abelson helper integration site 1
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr 6:135,283,532...135,497,771
Ensembl chr 6:135,283,532...135,497,765 Ensembl chr 6:135,283,532...135,497,765
G
CEP290
centrosomal protein 290
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099 Ensembl chr12:88,049,016...88,142,099
G
NPHP1
nephrocystin 1
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr 2:110,123,348...110,205,013
Ensembl chr 2:110,122,311...110,205,066
G
NPHP4
nephrocystin 4
located_in
IEA ISO
(MGI:6194004|PMID:29899041)
Ensembl MGI
PMID:29899041
GO_REF:0000107 MGI:6194004
NCBI chr 1:5,862,810...5,992,425
Ensembl chr 1:5,862,811...5,992,473
G
RPGR
retinitis pigmentosa GTPase regulator
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr X:38,269,163...38,327,509
Ensembl chr X:38,269,170...38,327,544 Ensembl chr X:38,269,170...38,327,544
G
RPGRIP1
RPGR interacting protein 1
located_in
IEA ISO
(MGI:6194004|PMID:29899041)
Ensembl MGI
PMID:29899041
GO_REF:0000107 MGI:6194004
NCBI chr14:21,280,083...21,351,316
Ensembl chr14:21,287,939...21,351,301 Ensembl chr14:21,287,939...21,351,301
G
SPATA7
spermatogenesis associated 7
part_of
IBA ISO
(PMID:21873635) (MGI:6194004|PMID:29899041)
GO_Central MGI
PMID:21873635 PMID:29899041
MGI:6194004
NCBI chr14:88,385,638...88,470,350
Ensembl chr14:88,384,924...88,470,350
G
ABCA4
ATP binding cassette subfamily A member 4
ISO
(MGI:5525015|PMID:23943788)
MGI
PMID:23943788
MGI:5525015
NCBI chr 1:93,992,834...94,121,148
Ensembl chr 1:93,992,834...94,121,148
G
AHI1
Abelson helper integration site 1
ISO
(MGI:4461813|PMID:20592197)
MGI
PMID:20592197
MGI:4461813
NCBI chr 6:135,283,532...135,497,771
Ensembl chr 6:135,283,532...135,497,765 Ensembl chr 6:135,283,532...135,497,765
G
ARR3
arrestin 3
located_in
IEA ISO
(MGI:1354839|PMID:10725384), (MGI:3616100|PMID:12486395)
UniProt MGI
PMID:10725384 PMID:12486395
GO_REF:0000044 MGI:1354839 MGI:3616100
NCBI chr X:70,268,334...70,281,840
Ensembl chr X:70,268,305...70,281,840
G
ATP8A2
ATPase phospholipid transporting 8A2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr13:25,371,974...26,025,851
Ensembl chr13:25,371,974...26,025,851
G
BBS4
Bardet-Biedl syndrome 4
ISO
(MGI:5525015|PMID:23943788)
MGI
PMID:23943788
MGI:5525015
NCBI chr15:72,686,204...72,738,476
Ensembl chr15:72,686,179...72,738,475
G
BBS7
Bardet-Biedl syndrome 7
located_in
IEA ISO
(MGI:5525015|PMID:23943788)
Ensembl MGI
PMID:23943788
GO_REF:0000107 MGI:5525015
NCBI chr 4:121,824,329...121,870,487
Ensembl chr 4:121,824,329...121,870,487
G
BSG
basigin (Ok blood group)
located_in
ISS ISO IEA
(MGI:6436439|PMID:25957687)
UniProt UniProt
PMID:25957687
GO_REF:0000024 GO_REF:0000044 MGI:6436439
NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,493 Ensembl chr19:571,277...583,493
G
CACNA1F
calcium voltage-gated channel subunit alpha1 F
located_in
IEA ISO
Ensembl RGD
PMID:11526344
GO_REF:0000107 RGD:632484
NCBI chr X:49,205,063...49,233,404
Ensembl chr X:49,205,063...49,233,371
G
CCDC66
coiled-coil domain containing 66
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 3:56,557,125...56,621,837
Ensembl chr 3:56,557,161...56,621,837
G
CEP250
centrosomal protein 250
located_in
ISS ISO
(MGI:6254746|PMID:28005958)
UniProt UniProt
PMID:28005958
GO_REF:0000024 MGI:6254746
NCBI chr20:35,455,137...35,519,280
Ensembl chr20:35,455,164...35,519,280
G
CEP290
centrosomal protein 290
ISO
(MGI:5525015|PMID:23943788)
MGI
PMID:23943788
MGI:5525015
NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099 Ensembl chr12:88,049,016...88,142,099
G
CERKL
ceramide kinase like
located_in
IEA ISO
(MGI:5571037|PMID:23142158)
Ensembl MGI
PMID:23142158
GO_REF:0000107 MGI:5571037
NCBI chr 2:181,536,672...181,657,105
Ensembl chr 2:181,536,672...181,680,665
G
CFAP410
cilia and flagella associated protein 410
located_in
IDA
(PMID:27548899)
UniProt
PMID:27548899
NCBI chr21:44,328,944...44,339,417
Ensembl chr21:44,328,944...44,339,402
G
CIB2
calcium and integrin binding family member 2
located_in
ISS ISO
(MGI:5487486|PMID:23023331)
UniProt UniProt
PMID:23023331
GO_REF:0000024 MGI:5487486
NCBI chr15:78,104,606...78,131,976
Ensembl chr15:78,104,606...78,131,535
G
CNGA1
cyclic nucleotide gated channel subunit alpha 1
ISO
(MGI:1354839|PMID:10725384), (MGI:3527312|PMID:15634774), (MGI:4461813|PMID:20592197)
MGI
PMID:10725384 PMID:15634774 PMID:20592197
MGI:1354839 MGI:3527312 MGI:4461813
NCBI chr 4:47,935,015...48,016,718
Ensembl chr 4:47,935,977...48,016,672 Ensembl chr 4:47,935,977...48,016,672
G
CNGA3
cyclic nucleotide gated channel subunit alpha 3
ISO
(MGI:1355614|PMID:10813773), (MGI:3527312|PMID:15634774)
MGI
PMID:10813773 PMID:15634774
MGI:1355614 MGI:3527312
NCBI chr 2:98,346,181...98,399,154
Ensembl chr 2:98,346,188...98,398,601 Ensembl chr 2:98,346,188...98,398,601
G
CNGB1
cyclic nucleotide gated channel subunit beta 1
located_in
IEA ISO
(MGI:5587954|PMID:22183407)
Ensembl MGI
PMID:22183407
GO_REF:0000107 MGI:5587954
NCBI chr16:57,882,340...57,971,128
Ensembl chr16:57,882,340...57,971,128
G
CNGB3
cyclic nucleotide gated channel subunit beta 3
located_in
IEA ISO
(MGI:3527312|PMID:15634774)
Ensembl MGI
PMID:15634774
GO_REF:0000107 MGI:3527312
NCBI chr 8:86,573,608...86,743,634
Ensembl chr 8:86,553,977...86,743,675
G
CRB1
crumbs cell polarity complex component 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455
G
EYS
eyes shut homolog
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 6:63,719,980...65,707,226
Ensembl chr 6:63,719,980...65,707,226
G
GNA11
G protein subunit alpha 11
located_in
ISS
AgBase
GO_REF:0000024
NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
G
GNAQ
G protein subunit alpha q
located_in
ISS
AgBase
GO_REF:0000024
NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
G
GNAT1
G protein subunit alpha transducin 1
located_in
IDA ISO
(PMID:2534964) (MGI:3778702|PMID:18367617), (MGI:4461813|PMID:20592197), (MGI:6383261|PMID:31696965)
UniProt RGD MGI
PMID:2534964 PMID:10396627 PMID:11931744 PMID:18367617 PMID:20592197 PMID:31696965
MGI:3778702 MGI:4461813 MGI:6383261 RGD:1599009 RGD:6893629
NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
G
GNAT2
G protein subunit alpha transducin 2
part_of located_in
IBA ISO IDA ISS
(PMID:21873635) (PMID:2534964)
GO_Central RGD UniProt
PMID:2534964 PMID:17591908 PMID:21873635
GO_REF:0000024 RGD:2302146
NCBI chr 1:109,603,091...109,619,616
Ensembl chr 1:109,603,254...109,619,929 Ensembl chr 1:109,603,254...109,619,929
G
GNAT3
G protein subunit alpha transducin 3
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr 7:80,457,291...80,512,503
Ensembl chr 7:80,458,635...80,512,064
G
GNB1
G protein subunit beta 1
ISO
(MGI:3778702|PMID:18367617)
MGI
PMID:18367617
MGI:3778702
NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,891,117
G
GNB5
G protein subunit beta 5
ISO
(MGI:5507748|PMID:23555598)
MGI
PMID:23555598
MGI:5507748
NCBI chr15:52,115,100...52,191,392
Ensembl chr15:52,115,105...52,191,369 Ensembl chr15:52,115,105...52,191,369
G
GNGT1
G protein subunit gamma transducin 1
ISO
RGD
PMID:10396627 PMID:11931744
RGD:1599009 RGD:6893629
NCBI chr 7:93,906,567...93,911,265
Ensembl chr 7:93,591,573...93,911,265
G
GRK1
G protein-coupled receptor kinase 1
ISO
(MGI:5587954|PMID:22183407)
MGI
PMID:22183407
MGI:5587954
NCBI chr13:113,645,771...113,737,736
Ensembl chr13:113,667,219...113,737,736
G
GUCA1A
guanylate cyclase activator 1A
ISO
RGD
PMID:9620085
RGD:1599354
NCBI chr 6:42,173,364...42,180,056
Ensembl chr 6:42,155,406...42,180,049 Ensembl chr 6:42,155,406...42,180,049 Ensembl chr 6:42,155,406...42,180,049
G
GUCA1ANB
GUCA1A neighbor
ISO
(MGI:5587954|PMID:22183407)
MGI
PMID:22183407
MGI:5587954
NCBI chr 6:42,155,406...42,163,418
Ensembl chr 6:42,155,406...42,163,439 Ensembl chr 6:42,155,406...42,163,439 Ensembl chr 6:42,155,406...42,163,439 Ensembl chr 6:42,155,406...42,163,439
G
GUCA1B
guanylate cyclase activator 1B
ISO
RGD
PMID:9620085
RGD:1599354
NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
G
GUCA2B
guanylate cyclase activator 2B
ISO
(MGI:5587954|PMID:22183407)
MGI
PMID:22183407
MGI:5587954
NCBI chr 1:42,153,410...42,155,820
Ensembl chr 1:42,153,410...42,155,820
G
GUCY2D
guanylate cyclase 2D, retinal
located_in
IDA
(PMID:7912093)
UniProt
PMID:7912093
NCBI chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342 Ensembl chr17:8,002,615...8,020,342
G
HNF1A
HNF1 homeobox A
located_in
IEA ISO
(MGI:1334099|PMID:10090727)
Ensembl MGI
PMID:10090727
GO_REF:0000107 MGI:1334099
NCBI chr12:120,977,683...121,002,512
Ensembl chr12:120,978,543...121,002,512
G
IFT140
intraflagellar transport 140
located_in
IEA ISO
(MGI:5604762|PMID:24619649)
Ensembl MGI
PMID:24619649
GO_REF:0000107 MGI:5604762
NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072
G
IFT20
intraflagellar transport 20
located_in
IEA ISO
(MGI:5317282|PMID:21307337)
Ensembl MGI
PMID:21307337
GO_REF:0000107 MGI:5317282
NCBI chr17:28,328,326...28,335,472
Ensembl chr17:28,328,325...28,335,489
G
IMPG1
interphotoreceptor matrix proteoglycan 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 6:75,921,114...76,072,662
Ensembl chr 6:75,921,114...76,072,678
G
INHA
inhibin subunit alpha
located_in
IEA ISO
Ensembl RGD
PMID:7596220
GO_REF:0000107 RGD:2290440
NCBI chr 2:219,572,310...219,575,711
Ensembl chr 2:219,569,162...219,575,711
G
IQCB1
IQ motif containing B1
located_in
IEA ISO
(MGI:3763297|PMID:15723066)
Ensembl HGNC-UCL
PMID:15723066
GO_REF:0000107 MGI:3763297
NCBI chr 3:121,769,761...121,835,060
Ensembl chr 3:121,769,761...121,835,079
G
LYAR
Ly1 antibody reactive
located_in
ISS ISO
(MGI:6107438|PMID:25735755)
UniProt UniProt
PMID:25735755
GO_REF:0000024 MGI:6107438
NCBI chr 4:4,267,701...4,290,195
Ensembl chr 4:4,267,701...4,290,154
G
MAK
male germ cell associated kinase
located_in
ISS ISO
(MGI:5298333|PMID:21148103)
UniProt MGI
PMID:21148103
GO_REF:0000024 MGI:5298333
NCBI chr 6:10,762,723...10,838,954
Ensembl chr 6:10,762,723...10,838,553 Ensembl chr 6:10,762,723...10,838,553
G
MAP1A
microtubule associated protein 1A
ISO
(MGI:5587952|PMID:24664738)
MGI
PMID:24664738
MGI:5587952
NCBI chr15:43,517,608...43,531,611
Ensembl chr15:43,510,958...43,531,620
G
MAP1B
microtubule associated protein 1B
located_in
IEA ISO
(MGI:5587952|PMID:24664738)
Ensembl MGI
PMID:24664738
GO_REF:0000107 MGI:5587952
NCBI chr 5:72,107,475...72,209,565
Ensembl chr 5:72,107,234...72,209,565
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MERTK
MER proto-oncogene, tyrosine kinase
located_in
IEA ISO
Ensembl RGD
PMID:11861639
GO_REF:0000107 RGD:1299193
NCBI chr 2:111,898,607...112,029,561
Ensembl chr 2:111,898,607...112,029,561
G
MYO3B
myosin IIIB
ISO
(MGI:4352610|PMID:19332056)
MGI
PMID:19332056
MGI:4352610
NCBI chr 2:170,178,147...170,655,167
Ensembl chr 2:170,178,145...170,655,171
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MYO5A
myosin VA
ISO
(MGI:3047015|PMID:14978221)
MGI
PMID:14978221
MGI:3047015
NCBI chr15:52,307,283...52,529,050
Ensembl chr15:52,307,283...52,529,050
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MYO7A
myosin VIIA
NOT NOT|located_in
ISO IDA
PMID:8842737 (PMID:8842737) (MGI:81971|PMID:8842737)
UniProt UniProt
PMID:8842737
MGI:81971 RGD:8553559
NCBI chr11:77,128,192...77,215,241
Ensembl chr11:77,128,246...77,215,241
G
MYRIP
myosin VIIA and Rab interacting protein
located_in
IEA ISO
(MGI:2180422|PMID:11964381)
Ensembl UniProt
PMID:11964381
GO_REF:0000107 MGI:2180422
NCBI chr 3:39,808,914...40,260,321
Ensembl chr 3:39,808,914...40,260,321
G
NUP42
nucleoporin 42
ISO
(MGI:5587954|PMID:22183407)
MGI
PMID:22183407
MGI:5587954
NCBI chr 7:23,181,298...23,201,011
Ensembl chr 7:23,181,841...23,201,011
G
NXNL1
nucleoredoxin like 1
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr19:17,455,425...17,460,926
Ensembl chr19:17,455,425...17,460,954 Ensembl chr19:17,455,425...17,460,954
G
OCRL
OCRL inositol polyphosphate-5-phosphatase
located_in
IDA
(PMID:22543976)
UniProt
PMID:22543976
NCBI chr X:129,540,259...129,592,556
Ensembl chr X:129,539,849...129,592,561
G
OPN1LW
opsin 1, long wave sensitive
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr X:154,144,243...154,159,032
Ensembl chr X:154,144,243...154,159,032
G
OPN1MW
opsin 1, medium wave sensitive
part_of
IBA ISO
(PMID:21873635) (MGI:1354839|PMID:10725384), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:5488667|PMID:23351594), (MGI:5494796|PMID:23386608)
GO_Central RGD MGI
PMID:10725384 PMID:12651948 PMID:19332056 PMID:20209167 PMID:21873635 PMID:23351594 PMID:23386608
MGI:1354839 MGI:2654998 MGI:4352610 MGI:5488667 MGI:5494796 RGD:6893562
NCBI chr X:154,182,596...154,196,861
Ensembl chr X:154,182,596...154,196,861
G
OPN1MW2
opsin 1, medium wave sensitive 2
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr X:154,219,756...154,233,286
Ensembl chr X:154,219,756...154,233,286
G
OPN1MW3
opsin 1, medium wave sensitive 3
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr X:154,257,560...154,271,090
Ensembl chr X:154,257,538...154,271,805
G
OPN1SW
opsin 1, short wave sensitive
part_of
IBA ISO
(PMID:21873635) (MGI:1354839|PMID:10725384), (MGI:1355614|PMID:10813773), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:5488667|PMID:23351594), (MGI:5494796|PMID:23386608), (MGI:5587954|PMID:22183407), (MGI:6305433|PMID:26420485)
GO_Central RGD MGI
PMID:10725384 PMID:10813773 PMID:12651948 PMID:19332056 PMID:20209167 PMID:21873635 PMID:22183407 PMID:23351594 PMID:23386608 PMID:26420485
MGI:1354839 MGI:1355614 MGI:2654998 MGI:4352610 MGI:5488667 MGI:5494796 MGI:5587954 MGI:6305433 RGD:6893562
NCBI chr 7:128,772,485...128,775,794
Ensembl chr 7:128,772,491...128,775,790 Ensembl chr 7:128,772,491...128,775,790
G
OPN3
opsin 3
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr 1:241,593,124...241,640,369
Ensembl chr 1:241,590,102...241,677,376 Ensembl chr 1:241,590,102...241,677,376
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PCARE
photoreceptor cilium actin regulator
part_of
IBA ISO
(PMID:21873635) (MGI:5636574|PMID:25616964)
GO_Central MGI
PMID:21873635 PMID:25616964
MGI:5636574
NCBI chr 2:29,061,695...29,074,523
Ensembl chr 2:29,060,976...29,074,523
G
PCDH15
protocadherin related 15
located_in
IDA ISO
(PMID:14570705) (MGI:3722521|PMID:14570705)
HGNC-UCL MGI
PMID:14570705
MGI:3722521
NCBI chr10:53,802,771...55,629,182
Ensembl chr10:53,802,771...55,627,942
G
PDC
phosducin
located_in
IEA ISO
(MGI:3778702|PMID:18367617)
UniProt MGI
PMID:18367617
GO_REF:0000044 MGI:3778702
NCBI chr 1:186,443,566...186,461,114
Ensembl chr 1:186,443,566...186,461,114
G
PDE6B
phosphodiesterase 6B
ISO
(MGI:5587954|PMID:22183407)
MGI
PMID:22183407
MGI:5587954
NCBI chr 4:587,325...670,892
Ensembl chr 4:625,584...670,782 Ensembl chr 4:625,584...670,782
G
PEX6
peroxisomal biogenesis factor 6
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 6:42,963,865...42,980,224
Ensembl chr 6:42,963,865...42,979,181
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PIP4K2A
phosphatidylinositol-5-phosphate 4-kinase type 2 alpha
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr10:22,534,854...22,714,578
Ensembl chr10:22,534,854...22,714,578
G
PPEF2
protein phosphatase with EF-hand domain 2
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 4:75,859,867...75,902,452
Ensembl chr 4:75,859,864...75,902,571
G
PRCD
photoreceptor disc component
ISO
(MGI:5819338|PMID:23672200)
HGNC
PMID:23672200
MGI:5819338
NCBI chr17:76,527,586...76,555,339
Ensembl chr17:76,527,586...76,553,578
G
PRKCA
protein kinase C alpha
ISO
(MGI:1355614|PMID:10813773)
MGI
PMID:10813773
MGI:1355614
NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743
G
PROM1
prominin 1
located_in
ISS ISO
(MGI:3838023|PMID:19228982)
UniProt UniProt
PMID:19228982
GO_REF:0000024 MGI:3838023
NCBI chr 4:15,968,226...16,084,059
Ensembl chr 4:15,963,076...16,084,378
G
PRPH
peripherin
ISO
(MGI:5587954|PMID:22183407)
MGI
PMID:22183407
MGI:5587954
NCBI chr12:49,295,144...49,298,698
Ensembl chr12:49,293,252...49,298,686
G
PRPH2
peripherin 2
located_in
IEA ISO
(MGI:5587954|PMID:22183407), (MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485)
UniProt MGI
PMID:22183407 PMID:26420485 PMID:28053051
GO_REF:0000044 MGI:5587954 MGI:5905515 MGI:6305433
NCBI chr 6:42,694,509...42,723,039
Ensembl chr 6:42,696,598...42,722,597
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PTGS1
prostaglandin-endoperoxide synthase 1
located_in
IEA ISO
(MGI:2429331|PMID:12355421)
Ensembl MGI
PMID:12355421
GO_REF:0000107 MGI:2429331
NCBI chr 9:122,369,906...122,395,703
Ensembl chr 9:122,370,530...122,395,703
G
PTPRK
protein tyrosine phosphatase receptor type K
ISO
(MGI:3794228|PMID:18308476)
MGI
PMID:18308476
MGI:3794228
NCBI chr 6:127,968,785...128,520,603
Ensembl chr 6:127,968,779...128,520,674 Ensembl chr 6:127,968,779...128,520,674
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RAB27A
RAB27A, member RAS oncogene family
located_in
IEA ISO
(MGI:2180422|PMID:11964381)
Ensembl UniProt
PMID:11964381
GO_REF:0000107 MGI:2180422
NCBI chr15:55,202,966...55,291,338
Ensembl chr15:55,202,966...55,319,113
G
RAPGEF4
Rap guanine nucleotide exchange factor 4
ISO
RGD
PMID:19883736
RGD:2314691
NCBI chr 2:172,735,282...173,052,893
Ensembl chr 2:172,735,274...173,052,893
G
RCVRN
recoverin
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr17:9,896,320...9,905,271
Ensembl chr17:9,896,320...9,905,271
G
RD3
RD3 regulator of GUCY2D
located_in
ISS ISO
(MGI:6368063|PMID:29515371)
UniProt UniProt
PMID:29515371
GO_REF:0000024 MGI:6368063
NCBI chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162 Ensembl chr 1:211,476,522...211,492,162
G
RGR
retinal G protein coupled receptor
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr10:84,243,741...84,259,960
Ensembl chr10:84,230,666...84,259,960
G
RGS9
regulator of G protein signaling 9
ISO
(MGI:5507748|PMID:23555598)
MGI
PMID:23555598
MGI:5507748
NCBI chr17:65,137,370...65,227,703
Ensembl chr17:65,100,812...65,227,703
G
RGS9BP
regulator of G protein signaling 9 binding protein
located_in
IEA ISO
(MGI:5507748|PMID:23555598)
Ensembl MGI
PMID:23555598
GO_REF:0000107 MGI:5507748
NCBI chr19:32,675,848...32,678,300
Ensembl chr19:32,675,848...32,678,300
G
RHO
rhodopsin
part_of
IDA ISO IBA
(PMID:11767049), (PMID:23704327) (MGI:1354839|PMID:10725384), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:4461813|PMID:20592197), (MGI:4949555|PMID:21444805), (MGI:4950337|PMID:21212183), (MGI:5462139|PMID:22869374), (MGI:5467890|PMID:23178122), (MGI:5488667|PMID:23351594), (MGI:5525015|PMID:23943788), (MGI:5587954|PMID:22183407), (MGI:5607451|PMID:25224828), (MGI:6305433|PMID:26420485) (PMID:21873635)
MGI MGI RGD GO_Central
PMID:8814134 PMID:10725384 PMID:11767049 PMID:12651948 PMID:19332056 PMID:20592197 PMID:21212183 PMID:21444805 PMID:21873635 PMID:22183407 PMID:22869374 PMID:23178122 PMID:23351594 PMID:23704327 PMID:23943788 PMID:25224828 PMID:26420485
MGI:1354839 MGI:2654998 MGI:4352610 MGI:4461813 MGI:4949555 MGI:4950337 MGI:5462139 MGI:5467890 MGI:5488667 MGI:5525015 MGI:5587954 MGI:5607451 MGI:6305433 RGD:6893595
NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344
G
ROM1
retinal outer segment membrane protein 1
ISO
(MGI:4461813|PMID:20592197), (MGI:5587954|PMID:22183407), (MGI:6305433|PMID:26420485)
MGI
PMID:20592197 PMID:22183407 PMID:26420485
MGI:4461813 MGI:5587954 MGI:6305433
NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116 Ensembl chr11:62,611,722...62,615,116
G
RP1
RP1 axonemal microtubule associated
located_in
ISS ISO
(MGI:2676521|PMID:14507858), (MGI:3629826|PMID:15269252)
UniProt UniProt
PMID:14507858 PMID:15269252
GO_REF:0000024 MGI:2676521 MGI:3629826
NCBI chr 8:54,509,448...54,871,720
Ensembl chr 8:54,509,422...54,871,720
G
RP1L1
RP1 like 1
located_in
ISS ISO
(MGI:4353917|PMID:19657028)
UniProt UniProt
PMID:19657028
GO_REF:0000024 MGI:4353917
NCBI chr 8:10,606,349...10,655,143
Ensembl chr 8:10,606,349...10,712,187
G
RPGR
retinitis pigmentosa GTPase regulator
located_in
IDA
(PMID:12140192)
UniProt
PMID:12140192
NCBI chr X:38,269,163...38,327,509
Ensembl chr X:38,269,170...38,327,544 Ensembl chr X:38,269,170...38,327,544
G
RRH
retinal pigment epithelium-derived rhodopsin homolog
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr 4:109,827,972...109,844,942
Ensembl chr 4:109,827,972...109,849,123
G
SAG
S-antigen visual arrestin
located_in part_of
IDA ISO IBA
(PMID:3720866) (MGI:5462139|PMID:22869374) (PMID:21873635)
UniProt RGD MGI GO_Central
PMID:3720866 PMID:10396627 PMID:21873635 PMID:22869374
MGI:5462139 RGD:6893629
NCBI chr 2:233,307,816...233,347,066
Ensembl chr 2:233,307,816...233,347,055
G
SHANK2
SH3 and multiple ankyrin repeat domains 2
located_in
ISS ISO
(MGI:5306573|PMID:19299912)
BHF-UCL CACAO
PMID:19299912
GO_REF:0000024 MGI:5306573
NCBI chr11:70,467,854...71,252,724
Ensembl chr11:70,467,856...71,252,577 Ensembl chr11:70,467,856...71,252,577
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TULP1
TUB like protein 1
located_in
ISS ISO
(MGI:4397555|PMID:19218615)
UniProt UniProt
PMID:19218615
GO_REF:0000024 MGI:4397555
NCBI chr 6:35,497,874...35,512,896
Ensembl chr 6:35,497,874...35,512,896
G
USH1C
USH1 protein network component harmonin
located_in
ISS ISO
(MGI:2679149|PMID:14578428), (MGI:3774983|PMID:17906286)
BHF-UCL RGD MGI
PMID:14578428 PMID:17906286
GO_REF:0000024 MGI:2679149 MGI:3774983 RGD:1303964
NCBI chr11:17,493,895...17,544,416
Ensembl chr11:17,493,895...17,544,416
G
VCAN
versican
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
G
WDR19
WD repeat domain 19
located_in
IEA
UniProt
GO_REF:0000044
NCBI chr 4:39,182,473...39,285,810
Ensembl chr 4:39,182,504...39,285,810
G
CDHR1
cadherin related family member 1
located_in
IEA ISO
(MGI:3814988|PMID:18654668)
Ensembl BHF-UCL
PMID:18654668
GO_REF:0000107 MGI:3814988
NCBI chr10:84,194,537...84,219,621
Ensembl chr10:84,194,537...84,219,621
G
CNGA1
cyclic nucleotide gated channel subunit alpha 1
located_in
IEA ISO
(MGI:3814988|PMID:18654668)
Ensembl BHF-UCL
PMID:18654668
GO_REF:0000107 MGI:3814988
NCBI chr 4:47,935,015...48,016,718
Ensembl chr 4:47,935,977...48,016,672 Ensembl chr 4:47,935,977...48,016,672
G
DHRS3
dehydrogenase/reductase 3
located_in
TAS
Reactome
Reactome:R-HSA-2465940
NCBI chr 1:12,567,910...12,618,210
Ensembl chr 1:12,567,910...12,618,210
G
GNAT1
G protein subunit alpha transducin 1
located_in
ISS
UniProt
GO_REF:0000024
NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
G
GNAT2
G protein subunit alpha transducin 2
located_in
ISS
UniProt
GO_REF:0000024
NCBI chr 1:109,603,091...109,619,616
Ensembl chr 1:109,603,254...109,619,929 Ensembl chr 1:109,603,254...109,619,929
G
GNB1
G protein subunit beta 1
located_in
IEA ISO
Ensembl RGD
PMID:11931744
GO_REF:0000107 RGD:1599009
NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,891,117
G
GUCY2D
guanylate cyclase 2D, retinal
located_in
IEA ISO
(MGI:5049799|PMID:21598940) PMID:9153227
Ensembl UniProt
PMID:9153227 PMID:21598940
GO_REF:0000107 MGI:5049799 RGD:1599625
NCBI chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342 Ensembl chr17:8,002,615...8,020,342
G
NAPEPLD
N-acyl phosphatidylethanolamine phospholipase D
located_in
TAS
Reactome
Reactome:R-HSA-2466831
NCBI chr 7:103,099,776...103,150,001
Ensembl chr 7:103,099,776...103,149,560
G
PDE6A
phosphodiesterase 6A
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr 5:149,857,953...149,944,793
Ensembl chr 5:149,857,953...149,944,793
G
PDE6B
phosphodiesterase 6B
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr 4:587,325...670,892
Ensembl chr 4:625,584...670,782 Ensembl chr 4:625,584...670,782
G
PDE6G
phosphodiesterase 6G
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr17:81,650,459...81,663,127
Ensembl chr17:81,650,459...81,663,112
G
PDE6H
phosphodiesterase 6H
part_of
IBA
(PMID:21873635)
GO_Central
PMID:21873635
NCBI chr12:14,973,042...14,981,865
Ensembl chr12:14,973,042...14,981,865
G
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2
located_in
IEA ISO
Ensembl RGD
PMID:20089132
GO_REF:0000107 RGD:5131540
NCBI chr16:71,644,924...71,724,701
Ensembl chr16:71,637,835...71,724,701
G
PRCD
photoreceptor disc component
located_in
IDA ISO
(PMID:27613864) (MGI:5812604|PMID:27613864), (MGI:6271388|PMID:27509380)
UniProt UniProt
PMID:27509380 PMID:27613864
MGI:5812604 MGI:6271388
NCBI chr17:76,527,586...76,555,339
Ensembl chr17:76,527,586...76,553,578
G
PROM1
prominin 1
located_in
IDA
(PMID:18654668)
BHF-UCL
PMID:18654668
NCBI chr 4:15,968,226...16,084,059
Ensembl chr 4:15,963,076...16,084,378
G
PRPH
peripherin
ISO
(MGI:1343017|PMID:10414956)
MGI
PMID:10414956
MGI:1343017
NCBI chr12:49,295,144...49,298,698
Ensembl chr12:49,293,252...49,298,686
G
RDH11
retinol dehydrogenase 11
NOT
ISO
(MGI:3584215|PMID:15790565)
MGI
PMID:15790565
MGI:3584215
NCBI chr14:67,676,800...67,695,764
Ensembl chr14:67,676,800...67,695,793
G
RHO
rhodopsin
located_in
IDA ISO
(PMID:19934218)
UniProt RGD
PMID:2209754 PMID:19934218
RGD:6893561
NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344
G
ROM1
retinal outer segment membrane protein 1
located_in
IEA ISO
(MGI:3814988|PMID:18654668)
Ensembl BHF-UCL
PMID:18654668
GO_REF:0000107 MGI:3814988
NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116 Ensembl chr11:62,611,722...62,615,116
G
CEP290
centrosomal protein 290
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099 Ensembl chr12:88,049,016...88,142,099
G
ATP1A4
ATPase Na+/K+ transporting subunit alpha 4
located_in
IDA
(PMID:26373354)
ARUK-UCL
PMID:26373354
NCBI chr 1:160,151,603...160,186,980
Ensembl chr 1:160,151,586...160,186,980 Ensembl chr 1:160,151,586...160,186,980
G
CEP290
centrosomal protein 290
ISO
(MGI:6194004|PMID:29899041)
MGI
PMID:29899041
MGI:6194004
NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099 Ensembl chr12:88,049,016...88,142,099
G
GUCY2F
guanylate cyclase 2F, retinal
located_in
ISS ISO
(MGI:4867355|PMID:21078983)
UniProt UniProt
PMID:21078983
GO_REF:0000024 MGI:4867355
NCBI chr X:109,372,061...109,482,086
Ensembl chr X:109,372,906...109,482,086
G
RD3
RD3 regulator of GUCY2D
located_in
IEA ISO
(MGI:4867355|PMID:21078983)
Ensembl UniProt
PMID:21078983
GO_REF:0000107 MGI:4867355
NCBI chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162 Ensembl chr 1:211,476,522...211,492,162
G
SPATA7
spermatogenesis associated 7
part_of
IBA ISO
(PMID:21873635) (MGI:6194004|PMID:29899041)
GO_Central MGI
PMID:21873635 PMID:29899041
MGI:6194004
NCBI chr14:88,385,638...88,470,350
Ensembl chr14:88,384,924...88,470,350
G
TMEM237
transmembrane protein 237
located_in
IEA ISO
(MGI:4830641|PMID:20375344)
Ensembl MGI
PMID:20375344
GO_REF:0000107 MGI:4830641
NCBI chr 2:201,620,186...201,643,503
Ensembl chr 2:201,620,184...201,643,570
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