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ONTOLOGY REPORT - ANNOTATIONS


Term:9+0 non-motile cilium
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Accession:GO:0097731 term browser browse the term
Definition:A non-motile cilium where the axoneme has a ring of nine outer microtubule doublets but no central microtubules (and is therefore called a 9+0 axoneme).
Comment:This type of cilia may be present in solitary (authentic primary cilia in many cell types) or in multiple copies (e.g. in Grueneberg ganglion neurons).
Synonyms:exact_synonym: 9+0 immotile cilium
 narrow_synonym: primary cilium


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9+0 non-motile cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1orf115 chromosome 1 open reading frame 115 located_in IDA (PMID:29257953) GO_Central PMID:29257953 NCBI chr 1:220,690,363...220,699,153
Ensembl chr 1:220,690,363...220,699,153
JBrowse link
G C4orf47 chromosome 4 open reading frame 47 located_in IDA (PMID:29257953) GO_Central PMID:29257953 NCBI chr 4:185,405,227...185,449,828
Ensembl chr 4:185,426,249...185,449,826
JBrowse link
G DYNLL2 dynein light chain LC8-type 2 located_in IDA (PMID:29257953) GO_Central PMID:29257953 NCBI chr17:58,083,419...58,095,542
Ensembl chr17:58,083,419...58,095,542
JBrowse link
G IFT80 intraflagellar transport 80 located_in IEA
ISO
(MGI:5807019|PMID:26996322) Ensembl
MGI
PMID:26996322 GO_REF:0000107 MGI:5807019 NCBI chr 3:160,256,986...160,399,225
Ensembl chr 3:160,256,986...160,399,880
JBrowse link
G IFTAP intraflagellar transport associated protein part_of IBA
ISO
(PMID:21873635)
(MGI:5807035|PMID:26703212)
GO_Central
MGI
PMID:21873635 PMID:26703212 MGI:5807035 NCBI chr11:36,594,246...36,659,272
Ensembl chr11:36,594,493...36,659,290
Ensembl chr11:36,594,493...36,659,290
JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase located_in IDA (PMID:29257953) GO_Central PMID:29257953 NCBI chr10:13,277,799...13,300,064
Ensembl chr10:13,277,796...13,302,412
JBrowse link
G PKHD1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin located_in IEA
ISO
(MGI:5604763|PMID:24586199) Ensembl
MGI
PMID:24586199 GO_REF:0000107 MGI:5604763 NCBI chr 6:51,614,685...52,087,625
Ensembl chr 6:51,615,299...52,087,613
JBrowse link
G SMO smoothened, frizzled class receptor located_in IEA
ISO
(MGI:5807019|PMID:26996322) Ensembl
MGI
PMID:26996322 GO_REF:0000107 MGI:5807019 NCBI chr 7:129,188,633...129,213,548
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
G TTLL4 tubulin tyrosine ligase like 4 located_in IEA
ISO
(MGI:3771321|PMID:17499049) Ensembl
MGI
PMID:17499049 GO_REF:0000107 MGI:3771321 NCBI chr 2:218,710,835...218,757,484
Ensembl chr 2:218,710,835...218,755,416
JBrowse link
G TTLL5 tubulin tyrosine ligase like 5 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chr14:75,661,246...75,955,079
Ensembl chr14:75,633,625...75,955,079
JBrowse link
G TTLL6 tubulin tyrosine ligase like 6 located_in IEA
ISO
(MGI:3771321|PMID:17499049) Ensembl
MGI
PMID:17499049 GO_REF:0000107 MGI:3771321 NCBI chr17:48,762,234...48,817,247
Ensembl chr17:48,762,235...48,817,214
JBrowse link
G TTLL7 tubulin tyrosine ligase like 7 ISO (MGI:3771321|PMID:17499049) MGI PMID:17499049 MGI:3771321 NCBI chr 1:83,865,021...83,999,141
Ensembl chr 1:83,865,024...83,999,150
JBrowse link
G TULP3 TUB like protein 3 part_of IDA (PMID:20889716) MGI PMID:20889716 NCBI chr12:2,890,891...2,941,138
Ensembl chr12:2,877,223...2,941,138
JBrowse link
cone photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUCA1A guanylate cyclase activator 1A located_in IDA (PMID:9620085) UniProt PMID:9620085 NCBI chr 6:42,173,364...42,180,056
Ensembl chr 6:42,155,406...42,180,049
Ensembl chr 6:42,155,406...42,180,049
Ensembl chr 6:42,155,406...42,180,049
JBrowse link
G GUCA1ANB GUCA1A neighbor ISO (MGI:6437034|PMID:9620085) UniProt PMID:9620085 MGI:6437034 NCBI chr 6:42,155,406...42,163,418
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
JBrowse link
G GUCA1B guanylate cyclase activator 1B located_in IDA (PMID:9620085) UniProt PMID:9620085 NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
JBrowse link
G LOC118142757 GUCA1ANB-GUCA1A readthrough located_in IDA (PMID:9620085) UniProt PMID:9620085 NCBI chr 6:42,155,406...42,180,056
Ensembl chr 6:42,155,406...42,181,338
JBrowse link
G RD3 RD3 regulator of GUCY2D located_in IEA
ISO
(MGI:4867355|PMID:21078983) Ensembl
UniProt
PMID:21078983 GO_REF:0000107 MGI:4867355 NCBI chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162
JBrowse link
G TMEM237 transmembrane protein 237 located_in IEA
ISO
(MGI:4830641|PMID:20375344) Ensembl
MGI
PMID:20375344 GO_REF:0000107 MGI:4830641 NCBI chr 2:201,620,186...201,643,503
Ensembl chr 2:201,620,184...201,643,570
JBrowse link
photoreceptor cell cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 located_in IDA (PMID:26373354) ARUK-UCL PMID:26373354 NCBI chr 1:160,151,603...160,186,980
Ensembl chr 1:160,151,586...160,186,980
Ensembl chr 1:160,151,586...160,186,980
JBrowse link
G CFAP410 cilia and flagella associated protein 410 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr21:44,328,944...44,339,417
Ensembl chr21:44,328,944...44,339,402
JBrowse link
G FAM161A FAM161 centrosomal protein A ISO (MGI:5438885|PMID:22791751) UniProt PMID:22791751 MGI:5438885 NCBI chr 2:61,800,240...61,854,126
Ensembl chr 2:61,824,848...61,854,143
JBrowse link
G IFT52 intraflagellar transport 52 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
JBrowse link
G PEX6 peroxisomal biogenesis factor 6 located_in IDA
ISO
(PMID:26593283)
(MGI:5816430|PMID:26593283)
UniProt
UniProt
PMID:26593283 MGI:5816430 NCBI chr 6:42,963,865...42,980,224
Ensembl chr 6:42,963,865...42,979,181
JBrowse link
G RP1 RP1 axonemal microtubule associated ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr 8:54,509,448...54,871,720
Ensembl chr 8:54,509,422...54,871,720
JBrowse link
G SDCCAG8 SHH signaling and ciliogenesis regulator SDCCAG8 located_in IEA
ISO
(MGI:6194004|PMID:29899041) Ensembl
MGI
PMID:29899041 GO_REF:0000107 MGI:6194004 NCBI chr 1:243,255,418...243,503,683
Ensembl chr 1:243,256,034...243,500,091
JBrowse link
photoreceptor connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADGRV1 adhesion G protein-coupled receptor V1 ISO (MGI:3774983|PMID:17906286) MGI PMID:17906286 MGI:3774983 NCBI chr 5:90,558,796...91,164,437
Ensembl chr 5:90,529,344...91,164,437
JBrowse link
G ARL3 ADP ribosylation factor like GTPase 3 located_in IDA (PMID:12417528) UniProt PMID:12417528 NCBI chr10:102,673,731...102,714,397
Ensembl chr10:102,673,731...102,714,397
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:5525015|PMID:23943788) MGI PMID:23943788 MGI:5525015 NCBI chr15:72,686,204...72,738,476
Ensembl chr15:72,686,179...72,738,475
JBrowse link
G CEP290 centrosomal protein 290 located_in ISS
ISO
(PMID:16682973)
(MGI:3624140|PMID:16632484), (MGI:3653539|PMID:16682973), (MGI:5525015|PMID:23943788)
UniProt
UniProt
PMID:16632484 PMID:16682973 PMID:23943788 MGI:3624140 MGI:3653539 MGI:5525015 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
Ensembl chr12:88,049,016...88,142,099
JBrowse link
G CETN1 centrin 1 located_in ISS
ISO
(MGI:3525432|PMID:15347651), (MGI:6393223|PMID:30120214) UniProt
MGI
PMID:15347651 PMID:30120214 GO_REF:0000024 MGI:3525432 MGI:6393223 NCBI chr18:580,380...582,114
Ensembl chr18:580,380...582,114
JBrowse link
G CETN2 centrin 2 located_in IEA
ISO
(MGI:3525432|PMID:15347651) Ensembl
MGI
PMID:15347651 GO_REF:0000107 MGI:3525432 NCBI chr  X:152,826,994...152,830,757
Ensembl chr  X:152,826,994...152,830,757
Ensembl chr  X:152,826,994...152,830,757
JBrowse link
G CETN3 centrin 3 located_in IEA
ISO
(MGI:3525432|PMID:15347651), (MGI:5303017|PMID:22031837), (MGI:5588761|PMID:24833722) Ensembl
MGI
PMID:15347651 PMID:22031837 PMID:24833722 GO_REF:0000107 MGI:3525432 MGI:5303017 MGI:5588761 NCBI chr 5:90,392,257...90,409,756
Ensembl chr 5:90,392,257...90,409,766
Ensembl chr 5:90,392,257...90,409,766
JBrowse link
G CFAP410 cilia and flagella associated protein 410 located_in ISS
ISO
(MGI:5770162|PMID:26974433) UniProt
UniProt
PMID:26974433 GO_REF:0000024 MGI:5770162 NCBI chr21:44,328,944...44,339,417
Ensembl chr21:44,328,944...44,339,402
JBrowse link
G FAM161A FAM161 centrosomal protein A located_in
part_of
IDA
ISO
IBA
(PMID:22940612)
(MGI:5438885|PMID:22791751), (MGI:5442623|PMID:22940612), (MGI:5588761|PMID:24833722)
(PMID:21873635)
UniProt
UniProt
GO_Central
PMID:21873635 PMID:22791751 PMID:22940612 PMID:24833722 MGI:5438885 MGI:5442623 MGI:5588761 RGD:8553427 NCBI chr 2:61,800,240...61,854,126
Ensembl chr 2:61,824,848...61,854,143
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 located_in IEA
ISO
(MGI:3757777|PMID:17881533) Ensembl
MGI
PMID:17881533 GO_REF:0000107 MGI:3757777 NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
JBrowse link
G IFT122 intraflagellar transport 122 located_in ISS
ISO
(MGI:3839506|PMID:19208653) UniProt
UniProt
PMID:19208653 GO_REF:0000024 MGI:3839506 NCBI chr 3:129,440,075...129,520,507
Ensembl chr 3:129,440,036...129,520,507
JBrowse link
G IFT140 intraflagellar transport 140 located_in IEA
ISO
(MGI:4460838|PMID:20368623), (MGI:5604762|PMID:24619649) Ensembl
MGI
PMID:20368623 PMID:24619649 GO_REF:0000107 MGI:4460838 MGI:5604762 NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072
JBrowse link
G IFT20 intraflagellar transport 20 located_in IEA
ISO
(MGI:5317282|PMID:21307337) Ensembl
MGI
PMID:21307337 GO_REF:0000107 MGI:5317282 NCBI chr17:28,328,326...28,335,472
Ensembl chr17:28,328,325...28,335,489
JBrowse link
G IFT52 intraflagellar transport 52 located_in IEA
ISO
(MGI:4460838|PMID:20368623) Ensembl
MGI
PMID:20368623 GO_REF:0000107 MGI:4460838 NCBI chr20:43,590,937...43,647,299
Ensembl chr20:43,590,937...43,647,299
JBrowse link
G IFT57 intraflagellar transport 57 located_in IEA
ISO
(MGI:4460838|PMID:20368623) Ensembl
MGI
PMID:20368623 GO_REF:0000107 MGI:4460838 NCBI chr 3:108,160,812...108,222,424
Ensembl chr 3:108,160,812...108,222,435
JBrowse link
G IFT88 intraflagellar transport 88 ISO (MGI:3839506|PMID:19208653), (MGI:4460838|PMID:20368623) MGI PMID:19208653 PMID:20368623 MGI:3839506 MGI:4460838 NCBI chr13:20,566,446...20,691,444
Ensembl chr13:20,567,069...20,691,437
Ensembl chr13:20,567,069...20,691,437
JBrowse link
G IQCB1 IQ motif containing B1 located_in IDA
ISO
(PMID:15723066)
(MGI:3763297|PMID:15723066)
HGNC-UCL
HGNC-UCL
PMID:15723066 MGI:3763297 NCBI chr 3:121,769,761...121,835,060
Ensembl chr 3:121,769,761...121,835,079
JBrowse link
G KIAA1549 KIAA1549 located_in ISS
ISO
(MGI:6393223|PMID:30120214) UniProt
UniProt
PMID:30120214 GO_REF:0000024 MGI:6393223 NCBI chr 7:138,831,377...138,981,626
Ensembl chr 7:138,831,381...138,981,318
Ensembl chr 7:138,831,381...138,981,318
JBrowse link
G KIF17 kinesin family member 17 located_in IEA
ISO
(MGI:4353477|PMID:19384852) Ensembl
MGI
PMID:19384852 GO_REF:0000107 MGI:4353477 NCBI chr 1:20,664,014...20,718,007
Ensembl chr 1:20,664,014...20,718,017
JBrowse link
G KIF3A kinesin family member 3A ISO (MGI:3839506|PMID:19208653) UniProt PMID:19208653 MGI:3839506 NCBI chr 5:132,688,808...132,737,563
Ensembl chr 5:132,692,628...132,737,638
JBrowse link
G KIFAP3 kinesin associated protein 3 located_in IEA
ISO
(MGI:4353477|PMID:19384852) Ensembl
MGI
PMID:19384852 GO_REF:0000107 MGI:4353477 NCBI chr 1:169,921,326...170,085,203
Ensembl chr 1:169,921,326...170,085,208
JBrowse link
G LCA5 lebercilin LCA5 located_in IDA
ISO
(PMID:21606596)
(MGI:5050784|PMID:21606596)
PMID:17546029
UniProt
UniProt
PMID:17546029 PMID:21606596 MGI:5050784 RGD:14397561 NCBI chr 6:79,484,991...79,537,430
Ensembl chr 6:79,484,991...79,537,458
JBrowse link
G MAK male germ cell associated kinase located_in IEA
ISO
(MGI:5298333|PMID:21148103) Ensembl
MGI
PMID:21148103 GO_REF:0000107 MGI:5298333 NCBI chr 6:10,762,723...10,838,954
Ensembl chr 6:10,762,723...10,838,553
Ensembl chr 6:10,762,723...10,838,553
JBrowse link
G MYO7A myosin VIIA located_in IEA
ISO
(MGI:1343017|PMID:10414956) Ensembl
MGI
PMID:10414956 GO_REF:0000107 MGI:1343017 NCBI chr11:77,128,192...77,215,241
Ensembl chr11:77,128,246...77,215,241
JBrowse link
G NPHP1 nephrocystin 1 located_in ISS
ISO
(MGI:4821072|PMID:16885411) UniProt
UniProt
PMID:16885411 GO_REF:0000024 MGI:4821072 NCBI chr 2:110,123,348...110,205,013
Ensembl chr 2:110,122,311...110,205,066
JBrowse link
G NPHP4 nephrocystin 4 ISO (MGI:4867588|PMID:21078623) MGI PMID:21078623 MGI:4867588 NCBI chr 1:5,862,810...5,992,425
Ensembl chr 1:5,862,811...5,992,473
JBrowse link
G PCDHB15 protocadherin beta 15 located_in IEA
ISO
(MGI:3775581|PMID:18279309) Ensembl
MGI
PMID:18279309 GO_REF:0000107 MGI:3775581 NCBI chr 5:141,245,395...141,249,365
Ensembl chr 5:141,245,395...141,249,365
JBrowse link
G PCDHB8 protocadherin beta 8 ISO (MGI:3775581|PMID:18279309) MGI PMID:18279309 MGI:3775581 NCBI chr 5:141,177,790...141,180,539
Ensembl chr 5:141,177,790...141,180,539
JBrowse link
G PDZD7 PDZ domain containing 7 colocalizes_with IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:101,007,679...101,031,145
Ensembl chr10:101,007,679...101,032,295
JBrowse link
G RP1 RP1 axonemal microtubule associated part_of IDA
ISO
(PMID:11767049)
(MGI:2156902|PMID:11773008), (MGI:2676521|PMID:14507858)
MGI
UniProt
PMID:11767049 PMID:11773008 PMID:14507858 MGI:2156902 MGI:2676521 NCBI chr 8:54,509,448...54,871,720
Ensembl chr 8:54,509,422...54,871,720
JBrowse link
G RP1L1 RP1 like 1 located_in ISS
ISO
(MGI:4353917|PMID:19657028) UniProt
UniProt
PMID:19657028 GO_REF:0000024 MGI:4353917 NCBI chr 8:10,606,349...10,655,143
Ensembl chr 8:10,606,349...10,712,187
JBrowse link
G RPGR retinitis pigmentosa GTPase regulator ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chr  X:38,269,163...38,327,509
Ensembl chr  X:38,269,170...38,327,544
Ensembl chr  X:38,269,170...38,327,544
JBrowse link
G RPGRIP1 RPGR interacting protein 1 located_in
part_of
ISS
ISO
IEA
IBA
(MGI:5608598|PMID:25398945)
(PMID:21873635)
UniProt
UniProt
InterPro
GO_Central
PMID:21873635 PMID:25398945 GO_REF:0000002 GO_REF:0000024 MGI:5608598 NCBI chr14:21,280,083...21,351,316
Ensembl chr14:21,287,939...21,351,301
Ensembl chr14:21,287,939...21,351,301
JBrowse link
G RPGRIP1L RPGRIP1 like part_of IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17558407 PMID:21873635 RGD:11537356 NCBI chr16:53,598,153...53,703,859
Ensembl chr16:53,598,153...53,703,938
JBrowse link
G SEPTIN2 septin 2 located_in IDA (PMID:23572511) GO_Central PMID:23572511 NCBI chr 2:241,315,270...241,354,027
Ensembl chr 2:241,315,100...241,354,027
JBrowse link
G SPATA7 spermatogenesis associated 7 located_in ISS
ISO
(MGI:5608598|PMID:25398945) UniProt
UniProt
PMID:25398945 GO_REF:0000024 MGI:5608598 NCBI chr14:88,385,638...88,470,350
Ensembl chr14:88,384,924...88,470,350
JBrowse link
G SPTBN5 spectrin beta, non-erythrocytic 5 part_of IDA (PMID:23704327) MGI PMID:23704327 NCBI chr15:41,848,146...41,894,053
Ensembl chr15:41,848,146...41,894,053
JBrowse link
G TBCC tubulin folding cofactor C located_in IDA (PMID:12417528) UniProt PMID:12417528 NCBI chr 6:42,744,498...42,746,103
Ensembl chr 6:42,744,498...42,746,103
JBrowse link
G TMEM237 transmembrane protein 237 located_in IEA
ISO
(MGI:4830641|PMID:20375344) Ensembl
MGI
PMID:20375344 GO_REF:0000107 MGI:4830641 NCBI chr 2:201,620,186...201,643,503
Ensembl chr 2:201,620,184...201,643,570
JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase part_of
located_in
IBA
ISO
IDA
(PMID:21873635)
(MGI:4939557|PMID:21159800)
(PMID:21159800)
GO_Central
BHF-UCL
BHF-UCL
PMID:21159800 PMID:21873635 MGI:4939557 NCBI chr 9:32,540,544...32,552,586
Ensembl chr 9:32,540,544...32,552,586
JBrowse link
G TSGA10IP testis specific 10 interacting protein part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:65,945,445...65,960,437
Ensembl chr11:65,945,445...65,959,963
JBrowse link
G TTC8 tetratricopeptide repeat domain 8 located_in IEA
ISO
(MGI:2677624|PMID:14520415) Ensembl
BHF-UCL
PMID:14520415 GO_REF:0000107 MGI:2677624 NCBI chr14:88,824,153...88,881,079
Ensembl chr14:88,824,153...88,881,078
JBrowse link
G USH1C USH1 protein network component harmonin colocalizes_with IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:17,493,895...17,544,416
Ensembl chr11:17,493,895...17,544,416
JBrowse link
G USH1G USH1 protein network component sans located_in IEA
ISO
(MGI:3774983|PMID:17906286) Ensembl
MGI
PMID:17906286 GO_REF:0000107 MGI:3774983 NCBI chr17:74,916,083...74,923,255
Ensembl chr17:74,916,083...74,923,256
JBrowse link
G USH2A usherin colocalizes_with ISS
ISO
(MGI:3774983|PMID:17906286), (MGI:4950337|PMID:21212183) UniProt
MGI
PMID:17906286 PMID:21212183 GO_REF:0000024 MGI:3774983 MGI:4950337 NCBI chr 1:215,622,891...216,423,448
Ensembl chr 1:215,622,891...216,423,448
JBrowse link
G WDR19 WD repeat domain 19 located_in ISS
ISO
(MGI:3839506|PMID:19208653) UniProt
UniProt
PMID:19208653 GO_REF:0000024 MGI:3839506 NCBI chr 4:39,182,473...39,285,810
Ensembl chr 4:39,182,504...39,285,810
JBrowse link
G WHRN whirlin colocalizes_with ISS
ISO
IBA
(MGI:3774983|PMID:17906286), (MGI:4950337|PMID:21212183)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:17906286 PMID:21212183 PMID:21873635 GO_REF:0000024 MGI:3774983 MGI:4950337 NCBI chr 9:114,402,078...114,505,500
Ensembl chr 9:114,402,080...114,505,473
JBrowse link
photoreceptor disc membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 located_in TAS Reactome Reactome:R-HSA-1467466 Reactome:R-HSA-2466802 NCBI chr 1:93,992,834...94,121,148
Ensembl chr 1:93,992,834...94,121,148
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 located_in TAS Reactome Reactome:R-HSA-2485182 Reactome:R-HSA-2534087 Reactome:R-HSA-2584246 Reactome:R-HSA-74059 NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
JBrowse link
G GNB1 G protein subunit beta 1 located_in TAS Reactome Reactome:R-HSA-2485182 NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,891,117
JBrowse link
G GNGT1 G protein subunit gamma transducin 1 located_in TAS Reactome Reactome:R-HSA-2485182 Reactome:R-HSA-2530501 NCBI chr 7:93,906,567...93,911,265
Ensembl chr 7:93,591,573...93,911,265
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 located_in TAS Reactome Reactome:R-HSA-2581474 NCBI chr13:113,645,771...113,737,736
Ensembl chr13:113,667,219...113,737,736
JBrowse link
G GRK4 G protein-coupled receptor kinase 4 located_in TAS Reactome Reactome:R-HSA-2581474 NCBI chr 4:2,963,504...3,040,760
Ensembl chr 4:2,963,571...3,040,760
JBrowse link
G GRK7 G protein-coupled receptor kinase 7 located_in TAS Reactome Reactome:R-HSA-2581474 NCBI chr 3:141,763,408...141,819,352
Ensembl chr 3:141,778,148...141,818,490
JBrowse link
G GUCA1A guanylate cyclase activator 1A located_in TAS Reactome Reactome:R-HSA-2586748 NCBI chr 6:42,173,364...42,180,056
Ensembl chr 6:42,155,406...42,180,049
Ensembl chr 6:42,155,406...42,180,049
Ensembl chr 6:42,155,406...42,180,049
JBrowse link
G GUCA1B guanylate cyclase activator 1B located_in TAS Reactome Reactome:R-HSA-2586748 NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
JBrowse link
G GUCA1C guanylate cyclase activator 1C located_in TAS Reactome Reactome:R-HSA-2586748 NCBI chr 3:108,907,644...108,955,195
Ensembl chr 3:108,907,792...108,953,879
JBrowse link
G GUCY2D guanylate cyclase 2D, retinal located_in TAS Reactome Reactome:R-HSA-74885 NCBI chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342
JBrowse link
G GUCY2F guanylate cyclase 2F, retinal located_in TAS Reactome Reactome:R-HSA-74885 NCBI chr  X:109,372,061...109,482,086
Ensembl chr  X:109,372,906...109,482,086
JBrowse link
G LOC118142757 GUCA1ANB-GUCA1A readthrough located_in TAS Reactome Reactome:R-HSA-2586748 NCBI chr 6:42,155,406...42,180,056
Ensembl chr 6:42,155,406...42,181,338
JBrowse link
G OPN1LW opsin 1, long wave sensitive located_in TAS Reactome Reactome:R-HSA-2465917 Reactome:R-HSA-2465924 Reactome:R-HSA-2466085 Reactome:R-HSA-2466822 Reactome:R-HSA-2471660 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 NCBI chr  X:154,144,243...154,159,032
Ensembl chr  X:154,144,243...154,159,032
JBrowse link
G OPN1MW opsin 1, medium wave sensitive located_in TAS Reactome Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466706 Reactome:R-HSA-2471641 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656893 NCBI chr  X:154,182,596...154,196,861
Ensembl chr  X:154,182,596...154,196,861
JBrowse link
G OPN1MW2 opsin 1, medium wave sensitive 2 located_in TAS Reactome Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466706 Reactome:R-HSA-2471641 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656893 NCBI chr  X:154,219,756...154,233,286
Ensembl chr  X:154,219,756...154,233,286
JBrowse link
G OPN1MW3 opsin 1, medium wave sensitive 3 located_in TAS Reactome Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466706 Reactome:R-HSA-2471641 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656893 NCBI chr  X:154,257,560...154,271,090
Ensembl chr  X:154,257,538...154,271,805
JBrowse link
G OPN1SW opsin 1, short wave sensitive located_in TAS Reactome Reactome:R-HSA-2465917 Reactome:R-HSA-2466085 Reactome:R-HSA-2466834 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 Reactome:R-HSA-9656891 NCBI chr 7:128,772,485...128,775,794
Ensembl chr 7:128,772,491...128,775,790
Ensembl chr 7:128,772,491...128,775,790
JBrowse link
G OPN4 opsin 4 located_in TAS Reactome Reactome:R-HSA-379048 Reactome:R-HSA-419861 Reactome:R-HSA-749448 Reactome:R-HSA-749452 NCBI chr10:86,653,495...86,666,460
Ensembl chr10:86,654,547...86,666,848
JBrowse link
G PCDHB8 protocadherin beta 8 ISO (MGI:3775581|PMID:18279309) MGI PMID:18279309 MGI:3775581 NCBI chr 5:141,177,790...141,180,539
Ensembl chr 5:141,177,790...141,180,539
JBrowse link
G PDE6A phosphodiesterase 6A located_in TAS Reactome Reactome:R-HSA-2584246 Reactome:R-HSA-74059 NCBI chr 5:149,857,953...149,944,793
Ensembl chr 5:149,857,953...149,944,793
JBrowse link
G PDE6B phosphodiesterase 6B located_in TAS Reactome Reactome:R-HSA-2584246 Reactome:R-HSA-74059 NCBI chr 4:587,325...670,892
Ensembl chr 4:625,584...670,782
Ensembl chr 4:625,584...670,782
JBrowse link
G PDE6G phosphodiesterase 6G located_in TAS Reactome Reactome:R-HSA-2584246 Reactome:R-HSA-74059 NCBI chr17:81,650,459...81,663,127
Ensembl chr17:81,650,459...81,663,112
JBrowse link
G RHO rhodopsin located_in IDA
TAS
(PMID:25664179) UniProt
Reactome
PMID:25664179 Reactome:R-HSA-2454118 Reactome:R-HSA-2581474 Reactome:R-HSA-2632521 Reactome:R-HSA-419841 Reactome:R-HSA-420883 Reactome:R-HSA-74101 Reactome:R-HSA-74948 Reactome:R-HSA-8982637 Reactome:R-HSA-8982640 NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344
JBrowse link
G SPTBN5 spectrin beta, non-erythrocytic 5 part_of IDA (PMID:23704327) MGI PMID:23704327 NCBI chr15:41,848,146...41,894,053
Ensembl chr15:41,848,146...41,894,053
JBrowse link
photoreceptor distal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHI1 Abelson helper integration site 1 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr 6:135,283,532...135,497,771
Ensembl chr 6:135,283,532...135,497,765
Ensembl chr 6:135,283,532...135,497,765
JBrowse link
G CEP290 centrosomal protein 290 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
Ensembl chr12:88,049,016...88,142,099
JBrowse link
G NPHP1 nephrocystin 1 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr 2:110,123,348...110,205,013
Ensembl chr 2:110,122,311...110,205,066
JBrowse link
G NPHP4 nephrocystin 4 located_in IEA
ISO
(MGI:6194004|PMID:29899041) Ensembl
MGI
PMID:29899041 GO_REF:0000107 MGI:6194004 NCBI chr 1:5,862,810...5,992,425
Ensembl chr 1:5,862,811...5,992,473
JBrowse link
G RPGR retinitis pigmentosa GTPase regulator ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr  X:38,269,163...38,327,509
Ensembl chr  X:38,269,170...38,327,544
Ensembl chr  X:38,269,170...38,327,544
JBrowse link
G RPGRIP1 RPGR interacting protein 1 located_in IEA
ISO
(MGI:6194004|PMID:29899041) Ensembl
MGI
PMID:29899041 GO_REF:0000107 MGI:6194004 NCBI chr14:21,280,083...21,351,316
Ensembl chr14:21,287,939...21,351,301
Ensembl chr14:21,287,939...21,351,301
JBrowse link
G SPATA7 spermatogenesis associated 7 part_of IBA
ISO
(PMID:21873635)
(MGI:6194004|PMID:29899041)
GO_Central
MGI
PMID:21873635 PMID:29899041 MGI:6194004 NCBI chr14:88,385,638...88,470,350
Ensembl chr14:88,384,924...88,470,350
JBrowse link
photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 ISO (MGI:5525015|PMID:23943788) MGI PMID:23943788 MGI:5525015 NCBI chr 1:93,992,834...94,121,148
Ensembl chr 1:93,992,834...94,121,148
JBrowse link
G AHI1 Abelson helper integration site 1 ISO (MGI:4461813|PMID:20592197) MGI PMID:20592197 MGI:4461813 NCBI chr 6:135,283,532...135,497,771
Ensembl chr 6:135,283,532...135,497,765
Ensembl chr 6:135,283,532...135,497,765
JBrowse link
G ARR3 arrestin 3 located_in IEA
ISO
(MGI:1354839|PMID:10725384), (MGI:3616100|PMID:12486395) UniProt
MGI
PMID:10725384 PMID:12486395 GO_REF:0000044 MGI:1354839 MGI:3616100 NCBI chr  X:70,268,334...70,281,840
Ensembl chr  X:70,268,305...70,281,840
JBrowse link
G ATP8A2 ATPase phospholipid transporting 8A2 located_in IEA UniProt GO_REF:0000044 NCBI chr13:25,371,974...26,025,851
Ensembl chr13:25,371,974...26,025,851
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:5525015|PMID:23943788) MGI PMID:23943788 MGI:5525015 NCBI chr15:72,686,204...72,738,476
Ensembl chr15:72,686,179...72,738,475
JBrowse link
G BBS7 Bardet-Biedl syndrome 7 located_in IEA
ISO
(MGI:5525015|PMID:23943788) Ensembl
MGI
PMID:23943788 GO_REF:0000107 MGI:5525015 NCBI chr 4:121,824,329...121,870,487
Ensembl chr 4:121,824,329...121,870,487
JBrowse link
G BSG basigin (Ok blood group) located_in ISS
ISO
IEA
(MGI:6436439|PMID:25957687) UniProt
UniProt
PMID:25957687 GO_REF:0000024 GO_REF:0000044 MGI:6436439 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,493
Ensembl chr19:571,277...583,493
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F located_in IEA
ISO
Ensembl
RGD
PMID:11526344 GO_REF:0000107 RGD:632484 NCBI chr  X:49,205,063...49,233,404
Ensembl chr  X:49,205,063...49,233,371
JBrowse link
G CCDC66 coiled-coil domain containing 66 located_in IEA UniProt GO_REF:0000044 NCBI chr 3:56,557,125...56,621,837
Ensembl chr 3:56,557,161...56,621,837
JBrowse link
G CEP250 centrosomal protein 250 located_in ISS
ISO
(MGI:6254746|PMID:28005958) UniProt
UniProt
PMID:28005958 GO_REF:0000024 MGI:6254746 NCBI chr20:35,455,137...35,519,280
Ensembl chr20:35,455,164...35,519,280
JBrowse link
G CEP290 centrosomal protein 290 ISO (MGI:5525015|PMID:23943788) MGI PMID:23943788 MGI:5525015 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
Ensembl chr12:88,049,016...88,142,099
JBrowse link
G CERKL ceramide kinase like located_in IEA
ISO
(MGI:5571037|PMID:23142158) Ensembl
MGI
PMID:23142158 GO_REF:0000107 MGI:5571037 NCBI chr 2:181,536,672...181,657,105
Ensembl chr 2:181,536,672...181,680,665
JBrowse link
G CFAP410 cilia and flagella associated protein 410 located_in IDA (PMID:27548899) UniProt PMID:27548899 NCBI chr21:44,328,944...44,339,417
Ensembl chr21:44,328,944...44,339,402
JBrowse link
G CIB2 calcium and integrin binding family member 2 located_in ISS
ISO
(MGI:5487486|PMID:23023331) UniProt
UniProt
PMID:23023331 GO_REF:0000024 MGI:5487486 NCBI chr15:78,104,606...78,131,976
Ensembl chr15:78,104,606...78,131,535
JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 ISO (MGI:1354839|PMID:10725384), (MGI:3527312|PMID:15634774), (MGI:4461813|PMID:20592197) MGI PMID:10725384 PMID:15634774 PMID:20592197 MGI:1354839 MGI:3527312 MGI:4461813 NCBI chr 4:47,935,015...48,016,718
Ensembl chr 4:47,935,977...48,016,672
Ensembl chr 4:47,935,977...48,016,672
JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 ISO (MGI:1355614|PMID:10813773), (MGI:3527312|PMID:15634774) MGI PMID:10813773 PMID:15634774 MGI:1355614 MGI:3527312 NCBI chr 2:98,346,181...98,399,154
Ensembl chr 2:98,346,188...98,398,601
Ensembl chr 2:98,346,188...98,398,601
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 located_in IEA
ISO
(MGI:5587954|PMID:22183407) Ensembl
MGI
PMID:22183407 GO_REF:0000107 MGI:5587954 NCBI chr16:57,882,340...57,971,128
Ensembl chr16:57,882,340...57,971,128
JBrowse link
G CNGB3 cyclic nucleotide gated channel subunit beta 3 located_in IEA
ISO
(MGI:3527312|PMID:15634774) Ensembl
MGI
PMID:15634774 GO_REF:0000107 MGI:3527312 NCBI chr 8:86,573,608...86,743,634
Ensembl chr 8:86,553,977...86,743,675
JBrowse link
G CRB1 crumbs cell polarity complex component 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 1:197,201,504...197,478,455
Ensembl chr 1:197,268,204...197,478,455
JBrowse link
G EYS eyes shut homolog located_in IEA UniProt GO_REF:0000044 NCBI chr 6:63,719,980...65,707,226
Ensembl chr 6:63,719,980...65,707,226
JBrowse link
G GNA11 G protein subunit alpha 11 located_in ISS AgBase GO_REF:0000024 NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
JBrowse link
G GNAQ G protein subunit alpha q located_in ISS AgBase GO_REF:0000024 NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 located_in IDA
ISO
(PMID:2534964)
(MGI:3778702|PMID:18367617), (MGI:4461813|PMID:20592197), (MGI:6383261|PMID:31696965)
UniProt
RGD
MGI
PMID:2534964 PMID:10396627 PMID:11931744 PMID:18367617 PMID:20592197 PMID:31696965 MGI:3778702 MGI:4461813 MGI:6383261 RGD:1599009 RGD:6893629 NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 part_of
located_in
IBA
ISO
IDA
ISS
(PMID:21873635)
(PMID:2534964)
GO_Central
RGD
UniProt
PMID:2534964 PMID:17591908 PMID:21873635 GO_REF:0000024 RGD:2302146 NCBI chr 1:109,603,091...109,619,616
Ensembl chr 1:109,603,254...109,619,929
Ensembl chr 1:109,603,254...109,619,929
JBrowse link
G GNAT3 G protein subunit alpha transducin 3 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:80,457,291...80,512,503
Ensembl chr 7:80,458,635...80,512,064
JBrowse link
G GNB1 G protein subunit beta 1 ISO (MGI:3778702|PMID:18367617) MGI PMID:18367617 MGI:3778702 NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,891,117
JBrowse link
G GNB5 G protein subunit beta 5 ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr15:52,115,100...52,191,392
Ensembl chr15:52,115,105...52,191,369
Ensembl chr15:52,115,105...52,191,369
JBrowse link
G GNGT1 G protein subunit gamma transducin 1 ISO RGD PMID:10396627 PMID:11931744 RGD:1599009 RGD:6893629 NCBI chr 7:93,906,567...93,911,265
Ensembl chr 7:93,591,573...93,911,265
JBrowse link
G GRK1 G protein-coupled receptor kinase 1 ISO (MGI:5587954|PMID:22183407) MGI PMID:22183407 MGI:5587954 NCBI chr13:113,645,771...113,737,736
Ensembl chr13:113,667,219...113,737,736
JBrowse link
G GUCA1A guanylate cyclase activator 1A ISO RGD PMID:9620085 RGD:1599354 NCBI chr 6:42,173,364...42,180,056
Ensembl chr 6:42,155,406...42,180,049
Ensembl chr 6:42,155,406...42,180,049
Ensembl chr 6:42,155,406...42,180,049
JBrowse link
G GUCA1ANB GUCA1A neighbor ISO (MGI:5587954|PMID:22183407) MGI PMID:22183407 MGI:5587954 NCBI chr 6:42,155,406...42,163,418
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
JBrowse link
G GUCA1B guanylate cyclase activator 1B ISO RGD PMID:9620085 RGD:1599354 NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
JBrowse link
G GUCA2B guanylate cyclase activator 2B ISO (MGI:5587954|PMID:22183407) MGI PMID:22183407 MGI:5587954 NCBI chr 1:42,153,410...42,155,820
Ensembl chr 1:42,153,410...42,155,820
JBrowse link
G GUCY2D guanylate cyclase 2D, retinal located_in IDA (PMID:7912093) UniProt PMID:7912093 NCBI chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342
JBrowse link
G HNF1A HNF1 homeobox A located_in IEA
ISO
(MGI:1334099|PMID:10090727) Ensembl
MGI
PMID:10090727 GO_REF:0000107 MGI:1334099 NCBI chr12:120,977,683...121,002,512
Ensembl chr12:120,978,543...121,002,512
JBrowse link
G IFT140 intraflagellar transport 140 located_in IEA
ISO
(MGI:5604762|PMID:24619649) Ensembl
MGI
PMID:24619649 GO_REF:0000107 MGI:5604762 NCBI chr16:1,510,427...1,612,072
Ensembl chr16:1,510,427...1,612,072
JBrowse link
G IFT20 intraflagellar transport 20 located_in IEA
ISO
(MGI:5317282|PMID:21307337) Ensembl
MGI
PMID:21307337 GO_REF:0000107 MGI:5317282 NCBI chr17:28,328,326...28,335,472
Ensembl chr17:28,328,325...28,335,489
JBrowse link
G IMPG1 interphotoreceptor matrix proteoglycan 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:75,921,114...76,072,662
Ensembl chr 6:75,921,114...76,072,678
JBrowse link
G INHA inhibin subunit alpha located_in IEA
ISO
Ensembl
RGD
PMID:7596220 GO_REF:0000107 RGD:2290440 NCBI chr 2:219,572,310...219,575,711
Ensembl chr 2:219,569,162...219,575,711
JBrowse link
G IQCB1 IQ motif containing B1 located_in IEA
ISO
(MGI:3763297|PMID:15723066) Ensembl
HGNC-UCL
PMID:15723066 GO_REF:0000107 MGI:3763297 NCBI chr 3:121,769,761...121,835,060
Ensembl chr 3:121,769,761...121,835,079
JBrowse link
G LYAR Ly1 antibody reactive located_in ISS
ISO
(MGI:6107438|PMID:25735755) UniProt
UniProt
PMID:25735755 GO_REF:0000024 MGI:6107438 NCBI chr 4:4,267,701...4,290,195
Ensembl chr 4:4,267,701...4,290,154
JBrowse link
G MAK male germ cell associated kinase located_in ISS
ISO
(MGI:5298333|PMID:21148103) UniProt
MGI
PMID:21148103 GO_REF:0000024 MGI:5298333 NCBI chr 6:10,762,723...10,838,954
Ensembl chr 6:10,762,723...10,838,553
Ensembl chr 6:10,762,723...10,838,553
JBrowse link
G MAP1A microtubule associated protein 1A ISO (MGI:5587952|PMID:24664738) MGI PMID:24664738 MGI:5587952 NCBI chr15:43,517,608...43,531,611
Ensembl chr15:43,510,958...43,531,620
JBrowse link
G MAP1B microtubule associated protein 1B located_in IEA
ISO
(MGI:5587952|PMID:24664738) Ensembl
MGI
PMID:24664738 GO_REF:0000107 MGI:5587952 NCBI chr 5:72,107,475...72,209,565
Ensembl chr 5:72,107,234...72,209,565
JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase located_in IEA
ISO
Ensembl
RGD
PMID:11861639 GO_REF:0000107 RGD:1299193 NCBI chr 2:111,898,607...112,029,561
Ensembl chr 2:111,898,607...112,029,561
JBrowse link
G MYO3B myosin IIIB ISO (MGI:4352610|PMID:19332056) MGI PMID:19332056 MGI:4352610 NCBI chr 2:170,178,147...170,655,167
Ensembl chr 2:170,178,145...170,655,171
JBrowse link
G MYO5A myosin VA ISO (MGI:3047015|PMID:14978221) MGI PMID:14978221 MGI:3047015 NCBI chr15:52,307,283...52,529,050
Ensembl chr15:52,307,283...52,529,050
JBrowse link
G MYO7A myosin VIIA NOT
NOT|located_in
ISO
IDA
PMID:8842737
(PMID:8842737)
(MGI:81971|PMID:8842737)
UniProt
UniProt
PMID:8842737 MGI:81971 RGD:8553559 NCBI chr11:77,128,192...77,215,241
Ensembl chr11:77,128,246...77,215,241
JBrowse link
G MYRIP myosin VIIA and Rab interacting protein located_in IEA
ISO
(MGI:2180422|PMID:11964381) Ensembl
UniProt
PMID:11964381 GO_REF:0000107 MGI:2180422 NCBI chr 3:39,808,914...40,260,321
Ensembl chr 3:39,808,914...40,260,321
JBrowse link
G NUP42 nucleoporin 42 ISO (MGI:5587954|PMID:22183407) MGI PMID:22183407 MGI:5587954 NCBI chr 7:23,181,298...23,201,011
Ensembl chr 7:23,181,841...23,201,011
JBrowse link
G NXNL1 nucleoredoxin like 1 located_in IEA UniProt GO_REF:0000044 NCBI chr19:17,455,425...17,460,926
Ensembl chr19:17,455,425...17,460,954
Ensembl chr19:17,455,425...17,460,954
JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase located_in IDA (PMID:22543976) UniProt PMID:22543976 NCBI chr  X:129,540,259...129,592,556
Ensembl chr  X:129,539,849...129,592,561
JBrowse link
G OPN1LW opsin 1, long wave sensitive part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:154,144,243...154,159,032
Ensembl chr  X:154,144,243...154,159,032
JBrowse link
G OPN1MW opsin 1, medium wave sensitive part_of IBA
ISO
(PMID:21873635)
(MGI:1354839|PMID:10725384), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:5488667|PMID:23351594), (MGI:5494796|PMID:23386608)
GO_Central
RGD
MGI
PMID:10725384 PMID:12651948 PMID:19332056 PMID:20209167 PMID:21873635 PMID:23351594 PMID:23386608 MGI:1354839 MGI:2654998 MGI:4352610 MGI:5488667 MGI:5494796 RGD:6893562 NCBI chr  X:154,182,596...154,196,861
Ensembl chr  X:154,182,596...154,196,861
JBrowse link
G OPN1MW2 opsin 1, medium wave sensitive 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:154,219,756...154,233,286
Ensembl chr  X:154,219,756...154,233,286
JBrowse link
G OPN1MW3 opsin 1, medium wave sensitive 3 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:154,257,560...154,271,090
Ensembl chr  X:154,257,538...154,271,805
JBrowse link
G OPN1SW opsin 1, short wave sensitive part_of IBA
ISO
(PMID:21873635)
(MGI:1354839|PMID:10725384), (MGI:1355614|PMID:10813773), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:5488667|PMID:23351594), (MGI:5494796|PMID:23386608), (MGI:5587954|PMID:22183407), (MGI:6305433|PMID:26420485)
GO_Central
RGD
MGI
PMID:10725384 PMID:10813773 PMID:12651948 PMID:19332056 PMID:20209167 PMID:21873635 PMID:22183407 PMID:23351594 PMID:23386608 PMID:26420485 MGI:1354839 MGI:1355614 MGI:2654998 MGI:4352610 MGI:5488667 MGI:5494796 MGI:5587954 MGI:6305433 RGD:6893562 NCBI chr 7:128,772,485...128,775,794
Ensembl chr 7:128,772,491...128,775,790
Ensembl chr 7:128,772,491...128,775,790
JBrowse link
G OPN3 opsin 3 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:241,593,124...241,640,369
Ensembl chr 1:241,590,102...241,677,376
Ensembl chr 1:241,590,102...241,677,376
JBrowse link
G PCARE photoreceptor cilium actin regulator part_of IBA
ISO
(PMID:21873635)
(MGI:5636574|PMID:25616964)
GO_Central
MGI
PMID:21873635 PMID:25616964 MGI:5636574 NCBI chr 2:29,061,695...29,074,523
Ensembl chr 2:29,060,976...29,074,523
JBrowse link
G PCDH15 protocadherin related 15 located_in IDA
ISO
(PMID:14570705)
(MGI:3722521|PMID:14570705)
HGNC-UCL
MGI
PMID:14570705 MGI:3722521 NCBI chr10:53,802,771...55,629,182
Ensembl chr10:53,802,771...55,627,942
JBrowse link
G PDC phosducin located_in IEA
ISO
(MGI:3778702|PMID:18367617) UniProt
MGI
PMID:18367617 GO_REF:0000044 MGI:3778702 NCBI chr 1:186,443,566...186,461,114
Ensembl chr 1:186,443,566...186,461,114
JBrowse link
G PDE6B phosphodiesterase 6B ISO (MGI:5587954|PMID:22183407) MGI PMID:22183407 MGI:5587954 NCBI chr 4:587,325...670,892
Ensembl chr 4:625,584...670,782
Ensembl chr 4:625,584...670,782
JBrowse link
G PEX6 peroxisomal biogenesis factor 6 located_in IEA UniProt GO_REF:0000044 NCBI chr 6:42,963,865...42,980,224
Ensembl chr 6:42,963,865...42,979,181
JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha located_in IEA UniProt GO_REF:0000044 NCBI chr10:22,534,854...22,714,578
Ensembl chr10:22,534,854...22,714,578
JBrowse link
G PPEF2 protein phosphatase with EF-hand domain 2 located_in IEA UniProt GO_REF:0000044 NCBI chr 4:75,859,867...75,902,452
Ensembl chr 4:75,859,864...75,902,571
JBrowse link
G PRCD photoreceptor disc component ISO (MGI:5819338|PMID:23672200) HGNC PMID:23672200 MGI:5819338 NCBI chr17:76,527,586...76,555,339
Ensembl chr17:76,527,586...76,553,578
JBrowse link
G PRKCA protein kinase C alpha ISO (MGI:1355614|PMID:10813773) MGI PMID:10813773 MGI:1355614 NCBI chr17:66,302,613...66,810,743
Ensembl chr17:66,302,613...66,810,743
JBrowse link
G PROM1 prominin 1 located_in ISS
ISO
(MGI:3838023|PMID:19228982) UniProt
UniProt
PMID:19228982 GO_REF:0000024 MGI:3838023 NCBI chr 4:15,968,226...16,084,059
Ensembl chr 4:15,963,076...16,084,378
JBrowse link
G PRPH peripherin ISO (MGI:5587954|PMID:22183407) MGI PMID:22183407 MGI:5587954 NCBI chr12:49,295,144...49,298,698
Ensembl chr12:49,293,252...49,298,686
JBrowse link
G PRPH2 peripherin 2 located_in IEA
ISO
(MGI:5587954|PMID:22183407), (MGI:5905515|PMID:28053051), (MGI:6305433|PMID:26420485) UniProt
MGI
PMID:22183407 PMID:26420485 PMID:28053051 GO_REF:0000044 MGI:5587954 MGI:5905515 MGI:6305433 NCBI chr 6:42,694,509...42,723,039
Ensembl chr 6:42,696,598...42,722,597
JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 located_in IEA
ISO
(MGI:2429331|PMID:12355421) Ensembl
MGI
PMID:12355421 GO_REF:0000107 MGI:2429331 NCBI chr 9:122,369,906...122,395,703
Ensembl chr 9:122,370,530...122,395,703
JBrowse link
G PTPRK protein tyrosine phosphatase receptor type K ISO (MGI:3794228|PMID:18308476) MGI PMID:18308476 MGI:3794228 NCBI chr 6:127,968,785...128,520,603
Ensembl chr 6:127,968,779...128,520,674
Ensembl chr 6:127,968,779...128,520,674
JBrowse link
G RAB27A RAB27A, member RAS oncogene family located_in IEA
ISO
(MGI:2180422|PMID:11964381) Ensembl
UniProt
PMID:11964381 GO_REF:0000107 MGI:2180422 NCBI chr15:55,202,966...55,291,338
Ensembl chr15:55,202,966...55,319,113
JBrowse link
G RAPGEF4 Rap guanine nucleotide exchange factor 4 ISO RGD PMID:19883736 RGD:2314691 NCBI chr 2:172,735,282...173,052,893
Ensembl chr 2:172,735,274...173,052,893
JBrowse link
G RCVRN recoverin located_in IEA UniProt GO_REF:0000044 NCBI chr17:9,896,320...9,905,271
Ensembl chr17:9,896,320...9,905,271
JBrowse link
G RD3 RD3 regulator of GUCY2D located_in ISS
ISO
(MGI:6368063|PMID:29515371) UniProt
UniProt
PMID:29515371 GO_REF:0000024 MGI:6368063 NCBI chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162
JBrowse link
G RGR retinal G protein coupled receptor part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:84,243,741...84,259,960
Ensembl chr10:84,230,666...84,259,960
JBrowse link
G RGS9 regulator of G protein signaling 9 ISO (MGI:5507748|PMID:23555598) MGI PMID:23555598 MGI:5507748 NCBI chr17:65,137,370...65,227,703
Ensembl chr17:65,100,812...65,227,703
JBrowse link
G RGS9BP regulator of G protein signaling 9 binding protein located_in IEA
ISO
(MGI:5507748|PMID:23555598) Ensembl
MGI
PMID:23555598 GO_REF:0000107 MGI:5507748 NCBI chr19:32,675,848...32,678,300
Ensembl chr19:32,675,848...32,678,300
JBrowse link
G RHO rhodopsin part_of IDA
ISO
IBA
(PMID:11767049), (PMID:23704327)
(MGI:1354839|PMID:10725384), (MGI:2654998|PMID:12651948), (MGI:4352610|PMID:19332056), (MGI:4461813|PMID:20592197), (MGI:4949555|PMID:21444805), (MGI:4950337|PMID:21212183), (MGI:5462139|PMID:22869374), (MGI:5467890|PMID:23178122), (MGI:5488667|PMID:23351594), (MGI:5525015|PMID:23943788), (MGI:5587954|PMID:22183407), (MGI:5607451|PMID:25224828), (MGI:6305433|PMID:26420485)
(PMID:21873635)
MGI
MGI
RGD
GO_Central
PMID:8814134 PMID:10725384 PMID:11767049 PMID:12651948 PMID:19332056 PMID:20592197 PMID:21212183 PMID:21444805 PMID:21873635 PMID:22183407 PMID:22869374 PMID:23178122 PMID:23351594 PMID:23704327 PMID:23943788 PMID:25224828 PMID:26420485 MGI:1354839 MGI:2654998 MGI:4352610 MGI:4461813 MGI:4949555 MGI:4950337 MGI:5462139 MGI:5467890 MGI:5488667 MGI:5525015 MGI:5587954 MGI:5607451 MGI:6305433 RGD:6893595 NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344
JBrowse link
G ROM1 retinal outer segment membrane protein 1 ISO (MGI:4461813|PMID:20592197), (MGI:5587954|PMID:22183407), (MGI:6305433|PMID:26420485) MGI PMID:20592197 PMID:22183407 PMID:26420485 MGI:4461813 MGI:5587954 MGI:6305433 NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116
Ensembl chr11:62,611,722...62,615,116
JBrowse link
G RP1 RP1 axonemal microtubule associated located_in ISS
ISO
(MGI:2676521|PMID:14507858), (MGI:3629826|PMID:15269252) UniProt
UniProt
PMID:14507858 PMID:15269252 GO_REF:0000024 MGI:2676521 MGI:3629826 NCBI chr 8:54,509,448...54,871,720
Ensembl chr 8:54,509,422...54,871,720
JBrowse link
G RP1L1 RP1 like 1 located_in ISS
ISO
(MGI:4353917|PMID:19657028) UniProt
UniProt
PMID:19657028 GO_REF:0000024 MGI:4353917 NCBI chr 8:10,606,349...10,655,143
Ensembl chr 8:10,606,349...10,712,187
JBrowse link
G RPGR retinitis pigmentosa GTPase regulator located_in IDA (PMID:12140192) UniProt PMID:12140192 NCBI chr  X:38,269,163...38,327,509
Ensembl chr  X:38,269,170...38,327,544
Ensembl chr  X:38,269,170...38,327,544
JBrowse link
G RRH retinal pigment epithelium-derived rhodopsin homolog part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:109,827,972...109,844,942
Ensembl chr 4:109,827,972...109,849,123
JBrowse link
G SAG S-antigen visual arrestin located_in
part_of
IDA
ISO
IBA
(PMID:3720866)
(MGI:5462139|PMID:22869374)
(PMID:21873635)
UniProt
RGD
MGI
GO_Central
PMID:3720866 PMID:10396627 PMID:21873635 PMID:22869374 MGI:5462139 RGD:6893629 NCBI chr 2:233,307,816...233,347,066
Ensembl chr 2:233,307,816...233,347,055
JBrowse link
G SHANK2 SH3 and multiple ankyrin repeat domains 2 located_in ISS
ISO
(MGI:5306573|PMID:19299912) BHF-UCL
CACAO
PMID:19299912 GO_REF:0000024 MGI:5306573 NCBI chr11:70,467,854...71,252,724
Ensembl chr11:70,467,856...71,252,577
Ensembl chr11:70,467,856...71,252,577
JBrowse link
G TULP1 TUB like protein 1 located_in ISS
ISO
(MGI:4397555|PMID:19218615) UniProt
UniProt
PMID:19218615 GO_REF:0000024 MGI:4397555 NCBI chr 6:35,497,874...35,512,896
Ensembl chr 6:35,497,874...35,512,896
JBrowse link
G USH1C USH1 protein network component harmonin located_in ISS
ISO
(MGI:2679149|PMID:14578428), (MGI:3774983|PMID:17906286) BHF-UCL
RGD
MGI
PMID:14578428 PMID:17906286 GO_REF:0000024 MGI:2679149 MGI:3774983 RGD:1303964 NCBI chr11:17,493,895...17,544,416
Ensembl chr11:17,493,895...17,544,416
JBrowse link
G VCAN versican located_in IEA UniProt GO_REF:0000044 NCBI chr 5:83,471,744...83,582,302
Ensembl chr 5:83,471,618...83,582,303
JBrowse link
G WDR19 WD repeat domain 19 located_in IEA UniProt GO_REF:0000044 NCBI chr 4:39,182,473...39,285,810
Ensembl chr 4:39,182,504...39,285,810
JBrowse link
photoreceptor outer segment membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDHR1 cadherin related family member 1 located_in IEA
ISO
(MGI:3814988|PMID:18654668) Ensembl
BHF-UCL
PMID:18654668 GO_REF:0000107 MGI:3814988 NCBI chr10:84,194,537...84,219,621
Ensembl chr10:84,194,537...84,219,621
JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 located_in IEA
ISO
(MGI:3814988|PMID:18654668) Ensembl
BHF-UCL
PMID:18654668 GO_REF:0000107 MGI:3814988 NCBI chr 4:47,935,015...48,016,718
Ensembl chr 4:47,935,977...48,016,672
Ensembl chr 4:47,935,977...48,016,672
JBrowse link
G DHRS3 dehydrogenase/reductase 3 located_in TAS Reactome Reactome:R-HSA-2465940 NCBI chr 1:12,567,910...12,618,210
Ensembl chr 1:12,567,910...12,618,210
JBrowse link
G GNAT1 G protein subunit alpha transducin 1 located_in ISS UniProt GO_REF:0000024 NCBI chr 3:50,191,610...50,197,696
Ensembl chr 3:50,191,610...50,197,696
JBrowse link
G GNAT2 G protein subunit alpha transducin 2 located_in ISS UniProt GO_REF:0000024 NCBI chr 1:109,603,091...109,619,616
Ensembl chr 1:109,603,254...109,619,929
Ensembl chr 1:109,603,254...109,619,929
JBrowse link
G GNB1 G protein subunit beta 1 located_in IEA
ISO
Ensembl
RGD
PMID:11931744 GO_REF:0000107 RGD:1599009 NCBI chr 1:1,785,286...1,891,087
Ensembl chr 1:1,785,285...1,891,117
JBrowse link
G GUCY2D guanylate cyclase 2D, retinal located_in IEA
ISO
(MGI:5049799|PMID:21598940)
PMID:9153227
Ensembl
UniProt
PMID:9153227 PMID:21598940 GO_REF:0000107 MGI:5049799 RGD:1599625 NCBI chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342
Ensembl chr17:8,002,615...8,020,342
JBrowse link
G NAPEPLD N-acyl phosphatidylethanolamine phospholipase D located_in TAS Reactome Reactome:R-HSA-2466831 NCBI chr 7:103,099,776...103,150,001
Ensembl chr 7:103,099,776...103,149,560
JBrowse link
G PDE6A phosphodiesterase 6A part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:149,857,953...149,944,793
Ensembl chr 5:149,857,953...149,944,793
JBrowse link
G PDE6B phosphodiesterase 6B part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:587,325...670,892
Ensembl chr 4:625,584...670,782
Ensembl chr 4:625,584...670,782
JBrowse link
G PDE6G phosphodiesterase 6G part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:81,650,459...81,663,127
Ensembl chr17:81,650,459...81,663,112
JBrowse link
G PDE6H phosphodiesterase 6H part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:14,973,042...14,981,865
Ensembl chr12:14,973,042...14,981,865
JBrowse link
G PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 located_in IEA
ISO
Ensembl
RGD
PMID:20089132 GO_REF:0000107 RGD:5131540 NCBI chr16:71,644,924...71,724,701
Ensembl chr16:71,637,835...71,724,701
JBrowse link
G PRCD photoreceptor disc component located_in IDA
ISO
(PMID:27613864)
(MGI:5812604|PMID:27613864), (MGI:6271388|PMID:27509380)
UniProt
UniProt
PMID:27509380 PMID:27613864 MGI:5812604 MGI:6271388 NCBI chr17:76,527,586...76,555,339
Ensembl chr17:76,527,586...76,553,578
JBrowse link
G PROM1 prominin 1 located_in IDA (PMID:18654668) BHF-UCL PMID:18654668 NCBI chr 4:15,968,226...16,084,059
Ensembl chr 4:15,963,076...16,084,378
JBrowse link
G PRPH peripherin ISO (MGI:1343017|PMID:10414956) MGI PMID:10414956 MGI:1343017 NCBI chr12:49,295,144...49,298,698
Ensembl chr12:49,293,252...49,298,686
JBrowse link
G RDH11 retinol dehydrogenase 11 NOT ISO (MGI:3584215|PMID:15790565) MGI PMID:15790565 MGI:3584215 NCBI chr14:67,676,800...67,695,764
Ensembl chr14:67,676,800...67,695,793
JBrowse link
G RHO rhodopsin located_in IDA
ISO
(PMID:19934218) UniProt
RGD
PMID:2209754 PMID:19934218 RGD:6893561 NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344
JBrowse link
G ROM1 retinal outer segment membrane protein 1 located_in IEA
ISO
(MGI:3814988|PMID:18654668) Ensembl
BHF-UCL
PMID:18654668 GO_REF:0000107 MGI:3814988 NCBI chr11:62,613,257...62,615,116
Ensembl chr11:62,611,722...62,615,116
Ensembl chr11:62,611,722...62,615,116
JBrowse link
photoreceptor proximal connecting cilium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP290 centrosomal protein 290 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
Ensembl chr12:88,049,016...88,142,099
JBrowse link
rod photoreceptor outer segment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP1A4 ATPase Na+/K+ transporting subunit alpha 4 located_in IDA (PMID:26373354) ARUK-UCL PMID:26373354 NCBI chr 1:160,151,603...160,186,980
Ensembl chr 1:160,151,586...160,186,980
Ensembl chr 1:160,151,586...160,186,980
JBrowse link
G CEP290 centrosomal protein 290 ISO (MGI:6194004|PMID:29899041) MGI PMID:29899041 MGI:6194004 NCBI chr12:88,049,013...88,142,216
Ensembl chr12:88,049,016...88,142,099
Ensembl chr12:88,049,016...88,142,099
JBrowse link
G GUCY2F guanylate cyclase 2F, retinal located_in ISS
ISO
(MGI:4867355|PMID:21078983) UniProt
UniProt
PMID:21078983 GO_REF:0000024 MGI:4867355 NCBI chr  X:109,372,061...109,482,086
Ensembl chr  X:109,372,906...109,482,086
JBrowse link
G RD3 RD3 regulator of GUCY2D located_in IEA
ISO
(MGI:4867355|PMID:21078983) Ensembl
UniProt
PMID:21078983 GO_REF:0000107 MGI:4867355 NCBI chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162
Ensembl chr 1:211,476,522...211,492,162
JBrowse link
G SPATA7 spermatogenesis associated 7 part_of IBA
ISO
(PMID:21873635)
(MGI:6194004|PMID:29899041)
GO_Central
MGI
PMID:21873635 PMID:29899041 MGI:6194004 NCBI chr14:88,385,638...88,470,350
Ensembl chr14:88,384,924...88,470,350
JBrowse link
G TMEM237 transmembrane protein 237 located_in IEA
ISO
(MGI:4830641|PMID:20375344) Ensembl
MGI
PMID:20375344 GO_REF:0000107 MGI:4830641 NCBI chr 2:201,620,186...201,643,503
Ensembl chr 2:201,620,184...201,643,570
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19352
    cellular anatomical entity 19121
      organelle 14345
        cilium 749
          non-motile cilium 193
            9+0 non-motile cilium 153
              photoreceptor cell cilium + 140
Path 2
Term Annotations click to browse term
  cellular_component 19352
    cellular anatomical entity 19121
      cell projection 2690
        plasma membrane bounded cell projection 2587
          cilium 749
            non-motile cilium 193
              9+0 non-motile cilium 153
                photoreceptor cell cilium + 140
paths to the root