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ONTOLOGY REPORT - ANNOTATIONS

Term:connective tissue replacement
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Accession:GO:0097709 term browser browse the term
Definition:The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared.


show annotations for term's descendants           Sort by:
connective tissue replacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (PMID:26574668), (PMID:27711214), (PMID:29571322), (PMID:29625576), (PMID:30150693) RGD PMID:26574668 PMID:27711214 PMID:29571322 PMID:29625576 PMID:30150693 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Umod uromodulin acts_upstream_of_or_within ISO (PMID:28785050), (PMID:29145399) RGD PMID:28785050 PMID:29145399 NCBI chr 1:173,816,341...173,829,681
Ensembl chr 1:173,816,339...173,830,302 		JBrowse link
connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec10a C-type lectin domain containing 10A acts_upstream_of_or_within ISO MGI:2183546 (PMID:15784728) RGD PMID:15784728 NCBI chr10:54,876,244...54,880,439
Ensembl chr10:54,876,260...54,880,435 		JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in ISO
IEA
ISS		 (PMID:9639571)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:9639571 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA
ISO		 GO_REF:0000107
(MGI:3772289|PMID:18037992)		 Ensembl
RGD		 PMID:18037992 GO_REF:0000107 MGI:3772289 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Il1a interleukin 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15784728)		 Ensembl
RGD		 PMID:15784728 GO_REF:0000107 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 acts_upstream_of_or_within ISO (PMID:23100531) RGD PMID:23100531 NCBI chr  X:1,212,969...1,217,714
Ensembl chr  X:1,212,972...1,217,664 		JBrowse link
negative regulation of connective tissue replacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata4 GATA binding protein 4 involved_in ISO (MGI:5780531|PMID:25590961) RGD PMID:25590961 MGI:5780531 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
negative regulation of connective tissue replacement involved in inflammatory response wound healing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein involved_in ISO (MGI:6101245|PMID:25296984) RGD PMID:25296984 MGI:6101245 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929 		JBrowse link
G Ager advanced glycosylation end product-specific receptor involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of_or_within IDA PMID:29695452 BHF-UCL PMID:29695452 RGD:150521636 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
positive regulation of connective tissue replacement term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klf6 KLF transcription factor 6 involved_in ISO (MGI:5447902|PMID:22820290) RGD PMID:22820290 MGI:5447902 NCBI chr17:64,539,456...64,548,451
Ensembl chr17:64,531,463...64,588,570 		JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISO RNAcentral:URS0000021B51_10090 (MGI:5784969|PMID:24657879) RGD PMID:24657879 MGI:5784969 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in ISO
IEA		 (PMID:28679962)
GO_REF:0000107		 RGD
Ensembl		 PMID:28679962 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IMP
ISO		 PMID:28679962
(MGI:6158813|PMID:28679962)		 RGD PMID:28679962 PMID:28679962 MGI:6158813, RGD:13601991 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
Term paths to the root