Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:glutamate receptor clustering
go back to main search page
Accession:GO:0097688 term browser browse the term
Definition:The neurotransmitter-gated ion channel clustering process in which glutamate receptors are localized to distinct domains in the cell membrane.
Synonyms:exact_synonym: glutamatergic receptor clustering


show annotations for term's descendants           Sort by:
 
glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glra3 glycine receptor, alpha 3 acts_upstream_of_or_within ISO (MGI:4365666|PMID:19723286) RGD PMID:19723286 MGI:4365666 NCBI chr16:34,205,431...34,848,332
Ensembl chr16:34,204,811...34,848,753
JBrowse link
AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E acts_upstream_of_or_within_positive_effect
involved_in
ISO
IEA
(PMID:24328732)
GO_REF:0000107
RGD
Ensembl
PMID:24328732 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IMP
IBA
PMID:21525273
PMID:21873635
BHF-UCL
GO_Central
PMID:21525273 PMID:21873635 RGD:8554095, RGD:13792537 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Lrrtm4 leucine rich repeat transmembrane neuronal 4 acts_upstream_of_or_within ISO MGI:5521326 (MGI:5515242|PMID:23911104) RGD PMID:23911104 MGI:5515242 NCBI chr 4:112,545,874...113,338,713
Ensembl chr 4:112,545,917...113,335,865
JBrowse link
G Nlgn1 neuroligin 1 involved_in ISS
ISO
IMP
GO_REF:0000024
(MGI:2665153|PMID:12796785), (MGI:5320256|PMID:21940442)
BHF-UCL
RGD
PMID:12796785 PMID:21940442 PMID:21940442 GO_REF:0000024 MGI:2665153 MGI:5320256, RGD:8553843 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in ISS
ISO
IEA
PMID:21795692
(MGI:5013997|PMID:21558424), (MGI:5320264|PMID:21795692)
GO_REF:0000107
RGD
Ensembl
PMID:21558424 PMID:21795692 PMID:21795692 GO_REF:0000107 MGI:5013997 MGI:5320264, RGD:7349315 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
positive regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IMP PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Grip2 glutamate receptor interacting protein 2 involved_in IMP PMID:20083202 UniProt PMID:20083202 RGD:4107359 NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
JBrowse link
G Snx27 sorting nexin 27 IMP RGD PMID:25071192 RGD:13508620 NCBI chr 2:182,135,904...182,218,906
Ensembl chr 2:182,135,905...182,218,906
JBrowse link
G Ssh1 slingshot protein phosphatase 1 IMP RGD PMID:20442266 RGD:11535133 NCBI chr12:42,621,127...42,683,262
Ensembl chr12:42,621,135...42,683,274
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IMP PMID:19596852 UniProt PMID:19596852 RGD:21201259 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060
JBrowse link
regulation of AMPA glutamate receptor clustering term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shank3 SH3 and multiple ankyrin repeat domains 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5056336 (MGI:5013997|PMID:21558424)
Ensembl
RGD
PMID:21558424 GO_REF:0000107 MGI:5013997 NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
JBrowse link
G Shisa6 shisa family member 6 involved_in ISO (MGI:5805758|PMID:26931375) RGD PMID:26931375 MGI:5805758 NCBI chr10:50,897,740...51,192,413
Ensembl chr10:50,903,333...51,192,063
JBrowse link
G Shisa7 shisa family member 7 NOT|involved_in ISO (MGI:6377643|PMID:31601770)
(MGI:6110888|PMID:29199957)
RGD PMID:29199957 PMID:31601770 MGI:6110888 MGI:6377643 NCBI chr 1:68,993,900...69,012,943
Ensembl chr 1:68,994,025...69,012,943
JBrowse link
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:3608695 (MGI:5616960|PMID:25429150) RGD PMID:25429150 MGI:5616960 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      cellular localization 2965
        localization within membrane 689
          protein localization to membrane 618
            receptor clustering 74
              neurotransmitter-gated ion channel clustering 19
                glutamate receptor clustering 13
                  AMPA glutamate receptor clustering + 12
                  regulation of glutamate receptor clustering + 9
Path 2
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      macromolecule localization 3001
        protein localization 2559
          cellular protein localization 1806
            protein localization to membrane 618
              receptor clustering 74
                neurotransmitter-gated ion channel clustering 19
                  glutamate receptor clustering 13
                    AMPA glutamate receptor clustering + 12
                    regulation of glutamate receptor clustering + 9
paths to the root