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ONTOLOGY REPORT - ANNOTATIONS


Term:ciliary transition fiber
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Accession:GO:0097539 term browser browse the term
Definition:A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium).
Comment:In mammals, ciliary transition fibers comprise at least five components (Ccdc41/Cep83, Cep89/Cep123, Sclt1, Fbf1, and Cep164) (PMID:24469809).
Synonyms:exact_synonym: cilial transition fiber;   cilial transition fibre;   ciliary transition fibre;   cilium transition fiber;   cilium transition fibre
 broad_synonym: transition fiber;   transition fibre
 related_synonym: centriolar distal appendage;   distal appendage of basal body;   distal appendage of centriole;   distal appendage of mother centriole


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ciliary transition fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F part_of ISO (PMID:25564561)
(MGI:5694347|PMID:25564561)
RGD PMID:25564561 MGI:5694347 NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669
JBrowse link
G Cep164 centrosomal protein 164 part_of IBA
ISO
PMID:21873635
(MGI:5554981|PMID:23955340), (MGI:6209354|PMID:29891944)
(PMID:23348840)
RGD PMID:23348840 PMID:23955340 PMID:29891944 PMID:21873635 MGI:5554981 MGI:6209354, RGD:13792537 NCBI chr 8:46,070,901...46,134,511
Ensembl chr 8:46,071,076...46,134,336
JBrowse link
G Cep83 centrosomal protein 83 part_of ISO (PMID:23348840) RGD PMID:23348840 NCBI chr 7:29,280,358...29,389,574
Ensembl chr 7:29,280,419...29,389,574
JBrowse link
G Cep89 centrosomal protein 89 part_of ISO (MGI:5502817|PMID:23789104)
(PMID:23348840), (PMID:23789104)
RGD PMID:23348840 PMID:23789104 MGI:5502817 NCBI chr 1:88,058,211...88,100,114
Ensembl chr 1:88,058,227...88,100,112
JBrowse link
G Dzip1 DAZ interacting zinc finger protein 1 part_of ISO MGI:5557987 (MGI:5554981|PMID:23955340) RGD PMID:23955340 MGI:5554981 NCBI chr15:95,956,329...96,009,994
Ensembl chr15:95,956,398...96,010,066
JBrowse link
G Fbf1 Fas binding factor 1 part_of ISO (PMID:23348840) RGD PMID:23348840 NCBI chr10:101,375,769...101,401,624
Ensembl chr10:101,375,775...101,401,644
JBrowse link
G Nin ninein part_of IBA
ISO
PMID:21873635
(MGI:5554981|PMID:23955340), (MGI:5694347|PMID:25564561), (MGI:5696763|PMID:10934040), (MGI:5696765|PMID:24947469)
RGD PMID:10934040 PMID:23955340 PMID:24947469 PMID:25564561 PMID:21873635 MGI:5554981 MGI:5694347 MGI:5696763 MGI:5696765, RGD:13792537 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
JBrowse link
G Odf2 outer dense fiber of sperm tails 2 part_of ISO (MGI:5696765|PMID:24947469) RGD PMID:24947469 MGI:5696765 NCBI chr 3:13,160,981...13,207,223
Ensembl chr 3:13,161,494...13,206,985
JBrowse link
G Sclt1 sodium channel and clathrin linker 1 part_of ISO (PMID:23348840) RGD PMID:23348840 NCBI chr 2:124,605,445...124,763,964
Ensembl chr 2:124,605,658...124,764,065
JBrowse link
G Tchp trichoplein, keratin filament binding part_of ISO (MGI:5696765|PMID:24947469) RGD PMID:24947469 MGI:5696765 NCBI chr12:41,877,888...41,893,264
Ensembl chr12:41,877,889...41,892,427
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    protein-containing complex 6011
      ciliary transition fiber 10
Path 2
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      organelle 13093
        membrane-bounded organelle 11654
          cilium 702
            ciliary transition fiber 10
paths to the root