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ONTOLOGY REPORT - ANNOTATIONS

Term:spine apparatus
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Accession:GO:0097444 term browser browse the term
Definition:A specialization of the endomembrane system found in some classes of dendritic spines consisting of two or more closely apposed lamellae with interspersed electron dense material. The endomembrane component is continuous with the smooth endoplasmic reticulum.
Synonyms:narrow_synonym: dense material
 xref: NIF_Subcellular:sao725931194


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spine apparatus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplp2 amyloid beta precursor like protein 2 is_active_in ISO (MGI:5904690|PMID:28450540) RGD PMID:28450540 MGI:5904690 NCBI chr 8:29,599,230...29,662,311
Ensembl chr 8:29,599,230...29,661,855 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 IDA RGD PMID:9030614 RGD:11041080 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Oprd1 opioid receptor, delta 1 is_active_in IDA PMID:11312309 SynGO PMID:11312309 RGD:13702315 NCBI chr 5:144,306,188...144,340,960
Ensembl chr 5:144,306,188...144,340,960 		JBrowse link
G Oprm1 opioid receptor, mu 1 is_active_in IDA PMID:11312309 SynGO PMID:11312309 RGD:13702315 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409 		JBrowse link
G Ppfia1 PTPRF interacting protein alpha 1 is_active_in IDA PMID:17419996 SynGO PMID:17419996 RGD:14696670 NCBI chr 1:199,641,277...199,718,371
Ensembl chr 1:199,641,277...199,717,277 		JBrowse link
G Synpo synaptopodin located_in
is_active_in		 ISO
IBA
IDA		 (MGI:2673780|PMID:12928494)
PMID:21873635
PMID:10701442		 RGD PMID:12928494 PMID:21873635 PMID:10701442 MGI:2673780, RGD:13792537, RGD:13702235 NCBI chr18:54,048,299...54,106,388
Ensembl chr18:54,026,152...54,102,126 		JBrowse link
spine apparatus membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit is_active_in IDA PMID:11588172 SynGO PMID:11588172 RGD:13702268 NCBI chr 1:116,715,286...116,837,223
Ensembl chr 1:116,714,711...116,837,240 		JBrowse link
G Clstn1 calsyntenin 1 is_active_in IDA PMID:11161476 SynGO PMID:11161476 RGD:13702439 NCBI chr 5:160,031,235...160,094,585
Ensembl chr 5:160,031,308...160,094,583 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20082
    cellular anatomical entity 19921
      endomembrane system 4060
        spine apparatus 8
          spine apparatus lumen 0
          spine apparatus membrane 2
Path 2
Term Annotations click to browse term
  cellular_component 20082
    cellular anatomical entity 19921
      cell projection 2514
        plasma membrane bounded cell projection 2436
          neuron projection 1569
            dendritic tree 815
              dendrite 813
                dendritic spine 232
                  spine apparatus 8
                    spine apparatus lumen 0
                    spine apparatus membrane 2
paths to the root