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ONTOLOGY REPORT - ANNOTATIONS

Term:apical dendrite
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Accession:GO:0097440 term browser browse the term
Definition:A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.
Synonyms:xref: NIF_Subcellular:sao273773228


show annotations for term's descendants           Sort by:
apical dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc2 actin related protein 2/3 complex, subunit 2 IDA RGD PMID:18509026 RGD:11530067 NCBI chr 9:75,820,782...75,851,471
Ensembl chr 9:75,820,770...75,851,471 		JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase IDA RGD PMID:9660869 RGD:11576296 NCBI chr  X:8,899,500...9,243,014
Ensembl chr  X:8,899,833...9,238,694 		JBrowse link
G Clu clusterin located_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:9560017) 		Alzheimers_University_of_Toronto
Ensembl
RGD		 PMID:9560017 GO_REF:0000024 GO_REF:0000107 NCBI chr15:44,336,619...44,375,861
Ensembl chr15:40,174,617...40,200,315 		JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 located_in ISO (PMID:22153079) RGD PMID:22153079 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560 		JBrowse link
G Elavl4 ELAV like RNA binding protein 4 IDA MMO:0000538 ex vivo light microscopy with immunohistochemistry RGD PMID:15519747 RGD:1579797 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IDA RGD PMID:17046728 RGD:1601061 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Fas Fas cell surface death receptor IDA RGD PMID:10024361 RGD:8662883 NCBI chr 1:241,212,155...241,245,774
Ensembl chr 1:231,798,960...231,832,591 		JBrowse link
G Flna filamin A IDA RGD PMID:22434607 RGD:7207403 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B IDA RGD PMID:12654351 RGD:13432041 NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 IDA RGD PMID:19458150 RGD:9686429 NCBI chr 2:49,495,771...49,899,983
Ensembl chr 2:49,495,771...49,899,774 		JBrowse link
G Itsn1 intersectin 1 IDA RGD PMID:12548702 RGD:13461862 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645 		JBrowse link
G Kif5a kinesin family member 5A IDA RGD PMID:9349526 RGD:12792964 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Map1b microtubule-associated protein 1B located_in IDA PMID:10640627 ARUK-UCL PMID:10640627 RGD:13464259 NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:30,817,261...30,910,317 		JBrowse link
G Map2 microtubule-associated protein 2 located_in ISO (PMID:23936366) RGD PMID:23936366 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
G Myo1d myosin ID located_in IDA PMID:8034741 UniProt PMID:8034741 RGD:633383 NCBI chr10:65,489,153...65,765,812
Ensembl chr10:65,489,154...65,766,349 		JBrowse link
G Nefh neurofilament heavy chain IDA MMO:0000538 RGD PMID:27457532 RGD:27372873 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351 		JBrowse link
G Negr1 neuronal growth regulator 1 IDA MMO:0000686 RGD PMID:12617969 RGD:405650376 NCBI chr 2:245,624,460...246,359,605
Ensembl chr 2:245,624,435...246,356,730 		JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 located_in ISO
IEA 		(PMID:22153079)
GO_REF:0000107 		RGD
Ensembl		 PMID:22153079 GO_REF:0000107 NCBI chr 1:256,008,012...256,094,219
Ensembl chr 1:246,067,100...246,152,903 		JBrowse link
G Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor located_in IDA PMID:21364755 UniProt PMID:21364755 RGD:8554501 NCBI chr 3:7,861,846...7,870,615
Ensembl chr 3:7,861,872...7,870,614 		JBrowse link
G Opcml opioid binding protein/cell adhesion molecule-like IDA MMO:0000686 RGD PMID:12617969 RGD:405650376 NCBI chr 8:26,788,988...27,304,551
Ensembl chr 8:26,192,841...27,300,620 		JBrowse link
G Osbp2 oxysterol binding protein 2 located_in ISO
IEA 		(PMID:24245814)
GO_REF:0000107 		RGD
Ensembl		 PMID:24245814 GO_REF:0000107 NCBI chr14:78,585,088...78,746,785
Ensembl chr14:78,585,089...78,746,786 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IDA RGD PMID:17335037 RGD:10059646 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta located_in IDA PMID:10583467 Alzheimers_University_of_Toronto PMID:10583467 RGD:8553344 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 IDA RGD PMID:11157073 RGD:1302222 NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984 		JBrowse link
G Rasgrf1 RAS protein-specific guanine nucleotide-releasing factor 1 IDA RGD PMID:12538592 RGD:10003123 NCBI chr 8:90,445,154...90,574,274
Ensembl chr 8:90,445,154...90,574,269 		JBrowse link
G Rgs12 regulator of G-protein signaling 12 IDA RGD PMID:16819986 RGD:7207381 NCBI chr14:75,715,925...75,824,012
Ensembl chr14:75,715,934...75,794,596 		JBrowse link
G Sez6 seizure related 6 homolog located_in ISO
IEA 		(PMID:18031681)
GO_REF:0000107 		RGD
Ensembl		 PMID:18031681 GO_REF:0000107 NCBI chr10:62,818,931...62,868,686
Ensembl chr10:62,819,069...62,868,671 		JBrowse link
G Slc17a8 solute carrier family 17 member 8 IDA RGD PMID:15163690 RGD:9999165 NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079 		JBrowse link
G Slc1a1 solute carrier family 1 member 1 located_in IDA PMID:10701825 ARUK-UCL PMID:10701825 RGD:21201260 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402 		JBrowse link
G Slc4a10 solute carrier family 4 member 10 located_in ISO
IEA 		(PMID:18165320)
GO_REF:0000107 		RGD
Ensembl		 PMID:18165320 GO_REF:0000107 NCBI chr 3:46,665,076...46,959,088
Ensembl chr 3:46,665,265...46,957,268 		JBrowse link
G Slc7a10 solute carrier family 7 member 10 IDA RGD PMID:15026164 RGD:1302264 NCBI chr 1:87,829,084...87,845,073
Ensembl chr 1:87,829,175...87,845,071 		JBrowse link
G Whrn whirlin IDA RGD PMID:12641734 RGD:632479 NCBI chr 5:76,828,308...76,911,945
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
G Ykt6 YKT6 v-SNARE homolog IDA RGD PMID:12589064 RGD:10003110 NCBI chr14:85,041,393...85,057,347
Ensembl chr14:80,832,187...80,843,385 		JBrowse link
apical distal dendrite term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 located_in IDA PMID:3517689 ARUK-UCL PMID:3517689 RGD:13514082 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21350
    cellular anatomical structure 21054
      somatodendritic compartment 1193
        dendritic tree 843
          dendrite 841
            apical dendrite 33
              apical distal dendrite 1
              apical proximal dendrite 0
Path 2
Term Annotations click to browse term
  cellular_component 21350
    cellular anatomical structure 21054
      cell projection 2814
        plasma membrane bounded cell projection 2724
          neuron projection 1630
            dendritic tree 843
              dendrite 841
                apical dendrite 33
                  apical distal dendrite 1
                  apical proximal dendrite 0
paths to the root