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ONTOLOGY REPORT - ANNOTATIONS

Term:perinucleolar compartment
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Accession:GO:0097356 term browser browse the term
Definition:The perinucleolar compartment (PNC) is a subnuclear structure associated with, but structurally distinct from, the nucleolus. The PNC contains large amounts of the heterogeneous nuclear ribonucleoprotein complex (hnRNP) called hnRNP 1 (PTB). Many RNA binding proteins as well as RNA polymerase III transcripts are highly enriched in this compartment. PTB and pol III transcripts are required for the integrity of the PNC.
Synonyms:exact_synonym: perinucleolar region


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perinucleolar compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 located_in ISO (PMID:18164289) ARUK-UCL PMID:18164289 NCBI chr 2:15,066,518...15,161,478
Ensembl chr 2:15,066,510...15,154,386 		JBrowse link
G EPPK1 epiplakin 1 located_in ISO (PMID:15671067) UniProt PMID:15671067 NCBI chr 4:780,276...798,760
Ensembl chr 4:785,029...798,563 		JBrowse link
G PDCL3 phosducin like 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,681,798...53,693,034
Ensembl chr 3:53,674,509...53,692,928 		JBrowse link
G SORL1 sortilin related receptor 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,435,350...48,653,670
Ensembl chr 9:48,435,345...48,653,655 		JBrowse link
G ZDHHC19 zinc finger DHHC-type palmitoyltransferase 19 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:133,873,072...133,886,202
Ensembl chr13:133,875,309...133,885,763 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18700
    cellular anatomical entity 18479
      perinucleolar compartment 5
Path 2
Term Annotations click to browse term
  cellular_component 18700
    cellular anatomical entity 18479
      organelle 12432
        membrane-bounded organelle 11419
          intracellular membrane-bounded organelle 10857
            nucleus 6836
              nuclear lumen 3889
                perinucleolar compartment 5
paths to the root