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ONTOLOGY REPORT - ANNOTATIONS

Term:perinucleolar compartment
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Accession:GO:0097356 term browser browse the term
Definition:The perinucleolar compartment (PNC) is a subnuclear structure associated with, but structurally distinct from, the nucleolus. The PNC contains large amounts of the heterogeneous nuclear ribonucleoprotein complex (hnRNP) called hnRNP 1 (PTB). Many RNA binding proteins as well as RNA polymerase III transcripts are highly enriched in this compartment. PTB and pol III transcripts are required for the integrity of the PNC.
Synonyms:exact_synonym: perinucleolar region


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perinucleolar compartment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:90,770,604...90,849,842
Ensembl chr 2:90,770,727...90,849,842 		JBrowse link
G Eppk1 epiplakin 1 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:75,973,337...76,004,395
Ensembl chr15:75,973,330...76,004,395 		JBrowse link
G Pdcl3 phosducin-like 3 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:39,026,895...39,036,317
Ensembl chr 1:39,024,689...39,036,319 		JBrowse link
G Sorl1 sortilin-related receptor, LDLR class A repeats-containing located_in IDA (MGI:6393363|PMID:11082041) UniProt PMID:11082041 MGI:6393363 NCBI chr 9:41,876,005...42,035,593
Ensembl chr 9:41,876,016...42,035,593 		JBrowse link
G Zdhhc19 zinc finger, DHHC domain containing 19 located_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:32,315,059...32,326,032
Ensembl chr16:32,315,083...32,380,784 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28585
    cellular anatomical entity 19618
      perinucleolar compartment 5
Path 2
Term Annotations click to browse term
  cellular_component 28585
    cellular anatomical entity 19618
      organelle 13534
        membrane-bounded organelle 12550
          intracellular membrane-bounded organelle 12003
            nucleus 7487
              nuclear lumen 4317
                perinucleolar compartment 5
paths to the root