Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:7SK snRNA binding
go back to main search page
Accession:GO:0097322 term browser browse the term
Definition:Binding to a 7SK small nuclear RNA (7SK snRNA).
Synonyms:exact_synonym: 7SK small nuclear RNA binding


show annotations for term's descendants           Sort by:
7SK snRNA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt1 cyclin T1 enables ISO (PMID:11713533) RGD PMID:11713533 NCBI chr 7:129,687,146...129,718,080
Ensembl chr 7:129,691,209...129,717,871 		JBrowse link
G Ccnt2 cyclin T2 enables ISO (PMID:11713533) RGD PMID:11713533 NCBI chr13:39,251,573...39,293,172
Ensembl chr13:39,251,573...39,292,019 		JBrowse link
G Cdk9 cyclin-dependent kinase 9 enables ISO
ISS
IEA		 (PMID:11713533)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:11713533 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410 		JBrowse link
G Celf3 CUGBP, Elav-like family member 3 enables ISO MGI:103186 (PMID:25145264) RGD PMID:25145264 NCBI chr 2:182,116,034...182,130,163
Ensembl chr 2:182,116,073...182,130,163 		JBrowse link
G Ddx21 DExD-box helicase 21 enables ISO
ISS		 (PMID:25470060)
GO_REF:0000024		 RGD
UniProt		 PMID:25470060 GO_REF:0000024 NCBI chr20:30,534,319...30,554,513
Ensembl chr20:30,534,319...30,554,543 		JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 enables ISO
ISS
IBA		 (PMID:12832472), (PMID:18249148), (PMID:18483487), (PMID:19883659), (PMID:28431135)
GO_REF:0000024
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:12832472 PMID:18249148 PMID:18483487 PMID:19883659 PMID:28431135 GO_REF:0000024 GO_REF:0000033 NCBI chr10:88,062,808...88,064,920
Ensembl chr10:88,062,803...88,066,189 		JBrowse link
G Hexim2 HEXIM P-TEFb complex subunit 2 enables ISO
IBA		 (PMID:19883659)
GO_REF:0000033		 RGD
GO_Central		 PMID:19883659 GO_REF:0000033 NCBI chr10:88,077,870...88,084,776
Ensembl chr10:88,079,014...88,084,775 		JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator enables ISS
ISO		 GO_REF:0000024
(PMID:18249148), (PMID:18483487), (PMID:27679474), (PMID:28431135), (PMID:29946027)		 UniProt
RGD		 PMID:18249148 PMID:18483487 PMID:27679474 PMID:28431135 PMID:29946027 GO_REF:0000024 NCBI chr 2:215,997,641...216,012,833
Ensembl chr 2:215,997,649...216,012,865 		JBrowse link
G Mepce methylphosphate capping enzyme enables ISO (PMID:28431135) RGD PMID:28431135 NCBI chr12:18,911,796...18,916,515
Ensembl chr12:18,911,796...18,916,514 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21010
    binding 18037
      organic cyclic compound binding 6372
        nucleic acid binding 4081
          RNA binding 1721
            snRNA binding 45
              7SK snRNA binding 9
paths to the root