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ONTOLOGY REPORT - ANNOTATIONS


Term:sperm principal piece
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Accession:GO:0097228 term browser browse the term
Definition:The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.


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sperm principal piece term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002854.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 1:87,153,798...87,155,118 JBrowse link
G Akap3 A-kinase anchoring protein 3 IBA
ISO
PMID:21873635
(MGI:1934729|PMID:11278869)
(PMID:15257753), (PMID:30745215)
RGD PMID:11278869, PMID:15257753, PMID:30745215, PMID:21873635 MGI:1934729, RGD:13792537 NCBI chr 4:159,399,686...159,425,512
Ensembl chr 4:159,403,501...159,425,629
JBrowse link
G Akap4 A-kinase anchoring protein 4 IEA
ISO
IBA
GO_REF:0000107
(MGI:2662354|PMID:12606363)
(PMID:30137358), (PMID:30745215)
PMID:21873635
Ensembl
RGD
PMID:12606363, PMID:30137358, PMID:30745215, PMID:21873635 GO_REF:0000107, MGI:2662354, RGD:13792537 NCBI chr  X:16,296,027...16,306,078
Ensembl chr  X:16,296,735...16,306,078
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 IDA RGD PMID:18057950 RGD:6906890 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
G Cabyr calcium binding tyrosine phosphorylation regulated ISO (MGI:3766876|PMID:17855365) RGD PMID:17855365 MGI:3766876 NCBI chr18:4,082,175...4,096,650
Ensembl chr18:4,084,228...4,095,936
JBrowse link
G Catsper4 cation channel, sperm associated 4 IBA
ISO
PMID:21873635
(MGI:3694233|PMID:17227845)
RGD PMID:17227845, PMID:21873635 MGI:3694233, RGD:13792537 NCBI chr 5:152,430,052...152,446,808
Ensembl chr 5:152,430,025...152,446,775
JBrowse link
G Catsperd cation channel sperm associated auxiliary subunit delta ISS
ISO
GO_REF:0000024
(MGI:5315675|PMID:21224844)
UniProt
RGD
PMID:21224844 GO_REF:0000024, MGI:5315675 NCBI chr 9:10,390,307...10,428,666
Ensembl chr 9:10,390,308...10,427,746
JBrowse link
G Catspere catsper channel auxiliary subunit epsilon ISO (PMID:28226241) RGD PMID:28226241 NCBI chr13:95,963,171...96,105,377 JBrowse link
G Catsperg cation channel sperm associated auxiliary subunit gamma IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:88,131,282...88,162,609
Ensembl chr 1:88,131,554...88,162,583
JBrowse link
G Catsperz catsper channel auxiliary subunit zeta ISO
IBA
(PMID:28226241)
(MGI:5825443|PMID:28226241)
PMID:21873635
RGD PMID:28226241, PMID:21873635 MGI:5825443, RGD:13792537 NCBI chr 1:222,179,451...222,182,716
Ensembl chr 1:222,179,436...222,182,721
JBrowse link
G Ccr6 C-C motif chemokine receptor 6 ISO (PMID:23765988)
(MGI:5784973|PMID:23765988)
RGD PMID:23765988 MGI:5784973 NCBI chr 1:53,063,380...53,087,519
Ensembl chr 1:53,065,025...53,087,474
JBrowse link
G Dnah8 dynein, axonemal, heavy chain 8 ISO (MGI:3604434|PMID:16054618) RGD PMID:16054618 MGI:3604434 NCBI chr20:9,301,317...9,560,805
Ensembl chr20:9,313,271...9,560,682
JBrowse link
G Efcab2 EF-hand calcium binding domain 2 ISO (MGI:6293973|PMID:30933994) RGD PMID:30933994 MGI:6293973 NCBI chr13:96,303,578...96,414,404
Ensembl chr13:96,303,703...96,414,404
JBrowse link
G Efcab9 EF-hand calcium binding domain 9 IBA
ISO
PMID:21873635
(MGI:6316499|PMID:31056283)
RGD PMID:31056283, PMID:21873635 MGI:6316499, RGD:13792537 NCBI chr10:17,399,291...17,406,915
Ensembl chr10:17,407,979...17,415,251
JBrowse link
G Enkur enkurin, TRPC channel interacting protein ISO (MGI:3841570|PMID:15385169) RGD PMID:15385169 MGI:3841570 NCBI chr17:88,071,794...88,095,444
Ensembl chr17:88,071,757...88,095,729
JBrowse link
G Eno4 enolase 4 ISO (MGI:5516566|PMID:23446454) RGD PMID:23446454 MGI:5516566 NCBI chr 1:280,097,061...280,129,750
Ensembl chr 1:280,103,695...280,127,073
JBrowse link
G Fscb fibrous sheath CABYR binding protein ISO (MGI:3766876|PMID:17855365) RGD PMID:17855365 MGI:3766876 NCBI chr 6:86,220,260...86,223,052
Ensembl chr 6:86,220,260...86,223,052
JBrowse link
G Fsip2 fibrous sheath-interacting protein 2 ISO (PMID:30745215) RGD PMID:30745215 NCBI chr 3:70,285,181...70,356,568
Ensembl chr 3:70,285,219...70,356,568
JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ISO (MGI:1197102|PMID:9510974) RGD PMID:9510974 MGI:1197102 NCBI chr 1:89,180,063...89,195,347
Ensembl chr 1:89,180,063...89,194,602
JBrowse link
G Hk1 hexokinase 1 ISO (MGI:4443253|PMID:19889946) RGD PMID:19889946 MGI:4443253 NCBI chr20:31,911,460...31,979,780
Ensembl chr20:31,912,262...31,956,649
JBrowse link
G Ift172 intraflagellar transport 172 ISO (MGI:5468889|PMID:23055941) RGD PMID:23055941 MGI:5468889 NCBI chr 6:26,390,686...26,485,459 JBrowse link
G Ift27 intraflagellar transport 27 ISO (MGI:5468889|PMID:23055941) RGD PMID:23055941 MGI:5468889 NCBI chr 7:119,393,384...119,409,710
Ensembl chr 7:119,393,384...119,409,710
JBrowse link
G Ift81 intraflagellar transport 81 IEA
ISO
GO_REF:0000107
(MGI:5468889|PMID:23055941)
Ensembl
RGD
PMID:23055941 GO_REF:0000107, MGI:5468889 NCBI chr12:39,420,161...39,507,412
Ensembl chr12:39,423,596...39,506,890
JBrowse link
G Kif2a kinesin family member 2A IEA
ISO
GO_REF:0000107
(MGI:5559917|PMID:24339785)
Ensembl
RGD
PMID:24339785 GO_REF:0000107, MGI:5559917 NCBI chr 2:38,145,507...38,208,765
Ensembl chr 2:38,147,601...38,208,719
JBrowse link
G Nme8 NME/NM23 family member 8 IEA
ISO
GO_REF:0000107
(MGI:2680785|PMID:12909633)
(PMID:11737268)
Ensembl
RGD
PMID:11737268, PMID:12909633 GO_REF:0000107, MGI:2680785 NCBI chr17:47,300,932...47,368,543
Ensembl chr17:47,301,511...47,368,553
JBrowse link
G Pfkm phosphofructokinase, muscle IEA
ISO
GO_REF:0000107
(MGI:4443253|PMID:19889946)
Ensembl
RGD
PMID:19889946 GO_REF:0000107, MGI:4443253 NCBI chr 7:139,702,066...139,722,132
Ensembl chr 7:139,685,573...139,722,132
JBrowse link
G Ropn1 rhophilin associated tail protein 1 ISO (MGI:1934729|PMID:11278869) RGD PMID:11278869 MGI:1934729 NCBI chr11:69,326,785...69,355,788
Ensembl chr11:69,326,719...69,355,854
JBrowse link
G Scnn1a sodium channel epithelial 1 subunit alpha IDA PMID:29453757 UniProt PMID:29453757 RGD:13514091 NCBI chr 4:157,834,339...157,860,472
Ensembl chr 4:157,836,912...157,860,049
JBrowse link
G Slc9b1 solute carrier family 9 member B1 ISO (MGI:5883207|PMID:20036903) RGD PMID:20036903 MGI:5883207 NCBI chr 2:240,527,120...240,581,616
Ensembl chr 2:240,527,130...240,576,179
JBrowse link
G Slc9b2 solute carrier family 9 member B2 ISS
ISO
GO_REF:0000024
(MGI:5883195|PMID:27010853)
UniProt
RGD
PMID:27010853 GO_REF:0000024, MGI:5883195 NCBI chr 2:240,485,254...240,519,166
Ensembl chr 2:240,495,371...240,519,141
JBrowse link
G Spa17 sperm autoantigenic protein 17 ISO
IBA
(PMID:15257753)
(MGI:76547|PMID:7578682)
PMID:21873635
RGD PMID:7578682, PMID:15257753, PMID:21873635 MGI:76547, RGD:13792537 NCBI chr 8:40,066,954...40,078,131
Ensembl chr 8:40,067,076...40,078,165
JBrowse link
G Spag6 sperm associated antigen 6 ISO (PMID:30137358) RGD PMID:30137358 NCBI chr17:85,382,314...85,437,976
Ensembl chr17:85,382,116...85,437,975
JBrowse link
G Spag6l sperm associated antigen 6-like ISO (MGI:1353805|PMID:10684790) RGD PMID:10684790 MGI:1353805 NCBI chr11:88,424,493...88,517,910
Ensembl chr11:88,424,414...88,508,601
JBrowse link
G Tekt4 tektin 4 ISO (MGI:3789743|PMID:17244819) RGD PMID:17244819 MGI:3789743 NCBI chr10:14,828,642...14,833,818
Ensembl chr10:14,828,597...14,833,827
JBrowse link
G Tsga10 testis specific 10 IEA
ISO
GO_REF:0000107
(MGI:3032834|PMID:14585816)
Ensembl
RGD
PMID:14585816 GO_REF:0000107, MGI:3032834 NCBI chr 9:44,351,655...44,456,576
Ensembl chr 9:44,351,951...44,456,554
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      sperm principal piece 35
Path 2
Term Annotations click to browse term
  cellular_component 20602
    cellular anatomical entity 20292
      cell projection 2550
        plasma membrane bounded cell projection 2479
          cilium 686
            motile cilium 230
              9+2 motile cilium 166
                sperm flagellum 153
                  sperm principal piece 35
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.