Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:epoxide metabolic process
go back to main search page
Accession:GO:0097176 term browser browse the term
Definition:The chemical reactions and pathways involving epoxides, compounds in which an oxygen atom is directly attached to two adjacent or non-adjacent carbon atoms of a carbon chain or ring system; thus cyclic ethers.
Synonyms:exact_synonym: epoxide metabolism


show annotations for term's descendants           Sort by:
epoxide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPHX1 epoxide hydrolase 1 involved_in IDA
IBA		 (PMID:22798687) UniProt
GO_Central		 PMID:22798687 GO_REF:0000033 NCBI chr 1:225,810,124...225,845,563
Ensembl chr 1:225,810,124...225,845,563 		JBrowse link
G EPHX2 epoxide hydrolase 2 involved_in IEA
IDA		 (PMID:21217101), (PMID:22798687) Ensembl
UniProt		 PMID:21217101 PMID:22798687 GO_REF:0000107 NCBI chr 8:27,491,143...27,548,626
Ensembl chr 8:27,490,781...27,545,564 		JBrowse link
G EPHX3 epoxide hydrolase 3 involved_in IDA (PMID:22798687) UniProt PMID:22798687 NCBI chr19:15,226,919...15,237,008
Ensembl chr19:15,226,919...15,233,435 		JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX5 arachidonate 5-lipoxygenase involved_in IMP
IDA
IEA		 (PMID:31664810)
(PMID:24282679)		 UniProt
Ensembl		 PMID:24282679 PMID:31664810 GO_REF:0000107 NCBI chr10:45,374,216...45,446,117
Ensembl chr10:45,374,176...45,446,119 		JBrowse link
leukotriene A4 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in
NOT|involved_in		 IDA (PMID:8250832)
(PMID:1851637)		 UniProt PMID:1851637 PMID:8250832 NCBI chr17:6,996,049...7,010,754
Ensembl chr17:6,996,049...7,010,754 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19777
    metabolic process 13069
      small molecule metabolic process 1994
        ether metabolic process 31
          epoxide metabolic process 5
            1,5-anhydro-D-fructose metabolic process + 0
            6-hydroxycineole metabolic process + 0
            all-trans-neoxanthin metabolic process + 0
            fumagillin metabolic process + 0
            leukotriene A4 metabolic process + 2
            pentalenolactone metabolic process + 0
            scopolamine biosynthetic process 0
            tetrahydrofuran catabolic process 0
            vomitoxin biosynthetic process 0
paths to the root