Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:epoxide metabolic process
go back to main search page
Accession:GO:0097176 term browser browse the term
Definition:The chemical reactions and pathways involving epoxides, compounds in which an oxygen atom is directly attached to two adjacent or non-adjacent carbon atoms of a carbon chain or ring system; thus cyclic ethers.
Synonyms:exact_synonym: epoxide metabolism


show annotations for term's descendants           Sort by:
epoxide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 involved_in ISO
IEA
IBA
IDA		 (PMID:22798687)
GO_REF:0000118
GO_REF:0000033
PMID:9854022		 RGD
TreeGrafter
GO_Central		 PMID:22798687 PMID:9854022 GO_REF:0000033 GO_REF:0000118, RGD:13210555 NCBI chr13:92,714,315...92,744,105
Ensembl chr13:92,714,315...92,790,235 		JBrowse link
G Ephx2 epoxide hydrolase 2 involved_in ISO
IEA
IDA		 (PMID:21217101), (PMID:22798687)
GO_REF:0000107
(MGI:4947022|PMID:21217101)		 RGD
Ensembl		 PMID:21217101 PMID:22798687 PMID:21217101 GO_REF:0000107 MGI:4947022, RGD:21201254 NCBI chr15:40,289,901...40,327,632
Ensembl chr15:40,289,902...40,327,615 		JBrowse link
G Ephx3 epoxide hydrolase 3 involved_in ISO (PMID:22798687) RGD PMID:22798687 NCBI chr 7:11,206,812...11,212,122
Ensembl chr 7:11,206,812...11,212,122 		JBrowse link
leukotriene A4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:24282679), (PMID:31664810)
(MGI:6392995|PMID:31642348)		 UniProt
Ensembl
RGD		 PMID:24282679 PMID:31642348 PMID:31664810 GO_REF:0000024 GO_REF:0000107 MGI:6392995 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743 		JBrowse link
leukotriene A4 metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in
NOT|involved_in		 ISO
ISS		 (PMID:8250832)
GO_REF:0000024
(PMID:1851637)		 RGD
UniProt		 PMID:1851637 PMID:8250832 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    metabolic process 11720
      small molecule metabolic process 1938
        ether metabolic process 27
          epoxide metabolic process 5
            1,5-anhydro-D-fructose metabolic process + 0
            6-hydroxycineole metabolic process + 0
            all-trans-neoxanthin metabolic process + 0
            fumagillin metabolic process + 0
            leukotriene A4 metabolic process + 2
            pentalenolactone metabolic process + 0
            scopolamine biosynthetic process 0
            tetrahydrofuran metabolic process 0
            vomitoxin biosynthetic process 0
paths to the root